Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11m06
         (822 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    24   4.9  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   6.5  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   6.5  
EF426161-1|ABO26404.1|  155|Anopheles gambiae unknown protein.         23   8.6  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    23   8.6  

>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
           protein.
          Length = 375

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +1

Query: 472 VCCIVLMASNNCSANLSNMSVKSGNESVISE 564
           VCC   +   NC  ++  + +  GN++ + E
Sbjct: 81  VCCPAFVNEPNCGPSVFGVRIIGGNDTELGE 111


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -2

Query: 221 PTKRRQKKAAAMP*RYESAA*QNPQKSLKSCSSTRKLSLPSKRCAPQ 81
           P +++Q  +A +P    S + + PQ S  S SS+   +LP+    P+
Sbjct: 24  PQQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEPR 70


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -2

Query: 221 PTKRRQKKAAAMP*RYESAA*QNPQKSLKSCSSTRKLSLPSKRCAPQ 81
           P +++Q  +A +P    S + + PQ S  S SS+   +LP+    P+
Sbjct: 24  PQQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEPR 70


>EF426161-1|ABO26404.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +1

Query: 373 IAVSKLLSVPLMFVMLDAKLVKIELVLFNSLRCVCCIVLMASNNCSANLSNMSVKSGNES 552
           + +S  L+V L F  L A+ V       ++LRC  C    + ++C A+  ++   S ++ 
Sbjct: 4   LKISSFLAVCLFFGALFAQSV-------SALRCYQCASPSSWSDCQASAQSVECTSASQM 56

Query: 553 VISESNVF 576
            I   ++F
Sbjct: 57  SIMGHSLF 64


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 97  LLGSDSFLVLLQLFRLFW 150
           ++GS  F++L Q+F  +W
Sbjct: 284 MIGSYIFMILSQMFAFYW 301


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,102
Number of Sequences: 2352
Number of extensions: 14522
Number of successful extensions: 57
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)