Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11l19
         (503 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017594-1|AAH17594.1|  242|Homo sapiens APAF1 interacting prote...   167   2e-41
BC009077-1|AAH09077.1|  242|Homo sapiens APAF1 interacting prote...   166   3e-41
AF132963-1|AAD27738.1|  242|Homo sapiens CGI-29 protein protein.      166   3e-41
BC008440-1|AAH08440.1|  242|Homo sapiens APAF1 interacting prote...   163   3e-40
BC010133-1|AAH10133.1|  204|Homo sapiens Unknown (protein for MG...   101   1e-21

>BC017594-1|AAH17594.1|  242|Homo sapiens APAF1 interacting protein
           protein.
          Length = 242

 Score =  167 bits (406), Expect = 2e-41
 Identities = 82/123 (66%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
 Frame = -1

Query: 392 EEHPRKLIPELCNQFYHLGWVTGTGGGISIKQGDKIYIAPSGVQKERMKANDLFVQTIXX 213
           +EHPR LIPELC QFYHLGWVTGTGGGIS+K GD+IYIAPSGVQKER++  D+FV  I  
Sbjct: 21  KEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVYDINE 80

Query: 212 XXXXXXXXXXXXXKSQCTPLFMLAYRMRNAGAVIHTHSPHAVRCTLLY-DKVFEITHQEM 36
                        KSQCTPLFM AY MR AGAVIHTHS  AV  TLL+  + F+ITHQEM
Sbjct: 81  KDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQEM 140

Query: 35  IKG 27
           IKG
Sbjct: 141 IKG 143


>BC009077-1|AAH09077.1|  242|Homo sapiens APAF1 interacting protein
           protein.
          Length = 242

 Score =  166 bits (404), Expect = 3e-41
 Identities = 82/123 (66%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
 Frame = -1

Query: 392 EEHPRKLIPELCNQFYHLGWVTGTGGGISIKQGDKIYIAPSGVQKERMKANDLFVQTIXX 213
           +EHPR LIPELC QFYHLGWVTGTGGGIS+K GD+IYIAPSGVQKER++  D+FV  I  
Sbjct: 21  KEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDINE 80

Query: 212 XXXXXXXXXXXXXKSQCTPLFMLAYRMRNAGAVIHTHSPHAVRCTLLY-DKVFEITHQEM 36
                        KSQCTPLFM AY MR AGAVIHTHS  AV  TLL+  + F+ITHQEM
Sbjct: 81  KDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQEM 140

Query: 35  IKG 27
           IKG
Sbjct: 141 IKG 143


>AF132963-1|AAD27738.1|  242|Homo sapiens CGI-29 protein protein.
          Length = 242

 Score =  166 bits (404), Expect = 3e-41
 Identities = 82/123 (66%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
 Frame = -1

Query: 392 EEHPRKLIPELCNQFYHLGWVTGTGGGISIKQGDKIYIAPSGVQKERMKANDLFVQTIXX 213
           +EHPR LIPELC QFYHLGWVTGTGGGIS+K GD+IYIAPSGVQKER++  D+FV  I  
Sbjct: 21  KEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDINE 80

Query: 212 XXXXXXXXXXXXXKSQCTPLFMLAYRMRNAGAVIHTHSPHAVRCTLLY-DKVFEITHQEM 36
                        KSQCTPLFM AY MR AGAVIHTHS  AV  TLL+  + F+ITHQEM
Sbjct: 81  KDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQEM 140

Query: 35  IKG 27
           IKG
Sbjct: 141 IKG 143


>BC008440-1|AAH08440.1|  242|Homo sapiens APAF1 interacting protein
           protein.
          Length = 242

 Score =  163 bits (396), Expect = 3e-40
 Identities = 81/123 (65%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
 Frame = -1

Query: 392 EEHPRKLIPELCNQFYHLGWVTGTGGGISIKQGDKIYIAPSGVQKERMKANDLFVQTIXX 213
           +E PR LIPELC QFYHLGWVTGTGGGIS+K GD+IYIAPSGVQKER++  D+FV  I  
Sbjct: 21  KERPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDINE 80

Query: 212 XXXXXXXXXXXXXKSQCTPLFMLAYRMRNAGAVIHTHSPHAVRCTLLY-DKVFEITHQEM 36
                        KSQCTPLFM AY MR AGAVIHTHS  AV  TLL+  + F+ITHQEM
Sbjct: 81  KDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQEM 140

Query: 35  IKG 27
           IKG
Sbjct: 141 IKG 143


>BC010133-1|AAH10133.1|  204|Homo sapiens Unknown (protein for
           MGC:19822) protein.
          Length = 204

 Score =  101 bits (242), Expect = 1e-21
 Identities = 54/92 (58%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
 Frame = -1

Query: 299 QGDKIYIAPSGVQKERMKANDLFVQTIXXXXXXXXXXXXXXXKSQCTPLFMLAYRMRNAG 120
           + D+IYIAPSGVQKER++  D+FV  I               KSQCTPLFM AY MR AG
Sbjct: 14  RSDEIYIAPSGVQKERIQPEDMFVCDINEKDISGPSPSKKLKKSQCTPLFMNAYTMRGAG 73

Query: 119 AVIHTHSPHAVRCTLLY-DKVFEITHQEMIKG 27
           AVIHTHS  AV  TLL+  + F+ITHQEMIKG
Sbjct: 74  AVIHTHSKAAVMATLLFPGREFKITHQEMIKG 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,707,772
Number of Sequences: 237096
Number of extensions: 1347587
Number of successful extensions: 2293
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2278
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)