Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11l17
(784 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288 59 5e-09
04_04_0598 - 26514226-26514545,26516080-26516302 58 1e-08
02_05_0085 - 25697860-25698142,25698631-25698946,25700481-257005... 56 2e-08
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 55 6e-08
01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774 52 5e-07
05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751 52 7e-07
04_03_0975 - 21370715-21370877,21371227-21371319,21371383-213714... 52 7e-07
01_01_0474 - 3488739-3488876,3488996-3489118,3489878-3489991,349... 52 7e-07
07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215 51 1e-06
05_01_0489 - 4077365-4077502,4078105-4078227,4079019-4079135,407... 50 2e-06
03_06_0330 - 33178114-33178206,33178317-33178382,33179704-331798... 50 3e-06
04_04_1575 + 34548774-34549109,34549979-34550185 48 6e-06
12_01_1027 + 10529545-10529777,10530269-10530668 45 8e-05
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 41 0.001
06_03_1048 + 27146475-27146652,27146739-27146804,27146880-271469... 40 0.002
04_03_0988 - 21469811-21469831,21470823-21471047,21471327-214716... 40 0.002
02_04_0182 + 20719782-20720033,20720502-20720605,20720693-207210... 40 0.002
08_02_0497 - 17811413-17811529,17811644-17811724,17812693-178128... 39 0.005
09_04_0345 + 16876489-16876614,16876718-16876876,16877989-168781... 37 0.016
12_01_1031 - 10605581-10606088,10606360-10606420,10606448-106064... 36 0.027
01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383... 36 0.027
10_08_0532 + 18580579-18580746,18581923-18581997,18582659-185838... 36 0.036
05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161,323... 36 0.036
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 36 0.048
05_05_0229 - 23457438-23457629,23457706-23457828,23457913-234580... 35 0.063
04_04_0782 + 28038292-28038413,28038577-28038778,28039221-280392... 32 0.59
04_03_1011 - 21708503-21708544,21708689-21708898,21709000-217091... 31 0.78
05_02_0053 - 6152204-6152329,6152817-6152981,6154698-6154883,615... 31 1.0
04_04_1248 - 32051679-32052356,32053617-32053778,32054147-320542... 31 1.0
09_06_0265 + 21933913-21933993,21934108-21934404 31 1.4
03_04_0013 + 16436438-16436536,16437257-16437742,16437791-164378... 29 3.2
03_04_0011 + 16398093-16398170,16401321-16401806,16401892-164023... 29 3.2
09_06_0119 - 20969450-20969643,20969767-20970088,20970147-209703... 28 7.3
11_05_0081 - 18924353-18924462,18925068-18925187,18925569-189260... 28 9.6
11_01_0787 + 6578158-6579287,6579439-6580870,6581087-6581097,658... 28 9.6
>07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288
Length = 122
Score = 58.8 bits (136), Expect = 5e-09
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
IDF A+WCGPC+ I P E A + A +YN+ +MPTF+F+K+G
Sbjct: 33 IDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEV-AEKYNVEAMPTFLFIKDG 91
Query: 604 KKLDEFSGANVD 569
+ D+ GA D
Sbjct: 92 AEADKVVGARKD 103
>04_04_0598 - 26514226-26514545,26516080-26516302
Length = 180
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+ + ATWCGPCKMI P + +++ E IAS+Y + S+PT + KNG
Sbjct: 96 VGYWATWCGPCKMIDPVVGKLSKEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNG 155
Query: 604 KKLDEFSGA 578
+K D GA
Sbjct: 156 EKKDAVIGA 164
>02_05_0085 -
25697860-25698142,25698631-25698946,25700481-25700518,
25700955-25701036,25701815-25702016
Length = 306
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
++F A+WCGPCKMI P + +++ E IA+++ I S+PT + KNG
Sbjct: 129 VEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYKLNTDENPDIATQFGIRSIPTMMIFKNG 188
Query: 604 KKLDEFSGA 578
+K D GA
Sbjct: 189 EKKDAVIGA 197
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 55.2 bits (127), Expect = 6e-08
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = -1
Query: 778 FMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKK 599
F A WCGPC+ IGP +A E +A +N++S+P+F FV+NGK+
Sbjct: 666 FTAAWCGPCRFIGPVCKSLA-EKHRNVVFLKVDIDELNSVAYRWNVSSVPSFFFVRNGKE 724
Query: 598 LDEFSGAN 575
+D+ GA+
Sbjct: 725 IDKVVGAD 732
>01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774
Length = 187
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+D WCGPCK++ PK E++ + +A E I +PTF +K+G
Sbjct: 104 LDMYTQWCGPCKVMAPKFQEMSEKDQDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDG 163
Query: 604 KKLDEFSGANVD 569
K + E +GA +D
Sbjct: 164 KVVKEVTGAKLD 175
>05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751
Length = 121
Score = 51.6 bits (118), Expect = 7e-07
Identities = 25/72 (34%), Positives = 38/72 (52%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
IDF A+WCGPC++I P ++ A+ IA ++++ +MPTF+F+K G
Sbjct: 39 IDFTASWCGPCRIIAPVFADL-AKKHTNAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEG 97
Query: 604 KKLDEFSGANVD 569
D GA D
Sbjct: 98 DVKDRVVGAMKD 109
>04_03_0975 -
21370715-21370877,21371227-21371319,21371383-21371466,
21371745-21371869,21372360-21372600,21373640-21373734
Length = 266
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
I+F A+WCGPC+M+ +DEIA E +A+ Y+I +PT + K+G
Sbjct: 38 IEFWASWCGPCRMVHRIVDEIAQEYAGRIKCYKLDTDDYPQVATSYSIERIPTVLLFKDG 97
Query: 604 KKLDEFSG 581
+K +G
Sbjct: 98 EKTHSITG 105
>01_01_0474 -
3488739-3488876,3488996-3489118,3489878-3489991,
3490416-3490452,3490584-3490675,3490878-3490956,
3491640-3491734,3491858-3491991,3492560-3492833,
3493743-3494015,3494976-3495512
Length = 631
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = -1
Query: 781 DFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGK 602
+F A WCGPC++I P E++ + +S ++I + PTF F+KNG+
Sbjct: 549 NFSAAWCGPCRVIAPVYAEMS-QTYPQFMFLTIDVDELMDFSSSWDIRATPTFFFLKNGE 607
Query: 601 KLDEFSGAN 575
++D+ GAN
Sbjct: 608 QVDKLVGAN 616
>07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215
Length = 138
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
IDF A+WCGPCKM+ P E+A +A + + +MPTFV + G
Sbjct: 48 IDFSASWCGPCKMMEPVFKEMAGRF-TDVAFLKVDVDELAEVARTWRVEAMPTFVLARGG 106
Query: 604 KKLDEFSGANVD 569
+++ GA+ D
Sbjct: 107 EEVGRIVGADKD 118
>05_01_0489 -
4077365-4077502,4078105-4078227,4079019-4079135,
4079243-4079263
Length = 132
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = -1
Query: 781 DFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGK 602
+F A+WCGPC++I P E++ + +S ++I + PTF F+KN K
Sbjct: 50 NFSASWCGPCRVIAPIYAEMS-KTYPQLMFLTIDVDDLMDFSSSWDIRATPTFFFIKNEK 108
Query: 601 KLDEFSGAN 575
++D+ GAN
Sbjct: 109 QVDKLVGAN 117
>03_06_0330 -
33178114-33178206,33178317-33178382,33179704-33179826,
33179930-33180067
Length = 139
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
IDF ATWCGPC+ I P ++A +A ++ + +MPTFV +K G
Sbjct: 49 IDFSATWCGPCRFIEPAFKDMAGRF-ADAVFFKIDVDELSEVARQWKVEAMPTFVLIKGG 107
Query: 604 KK 599
K+
Sbjct: 108 KE 109
>04_04_1575 + 34548774-34549109,34549979-34550185
Length = 180
Score = 48.4 bits (110), Expect = 6e-06
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+DF+A WCGPC++I P +D A E + EY + +P+ + K+G
Sbjct: 90 VDFVADWCGPCRLIAPVVDWAAEEYEGRLKIVKIDHDANPQLIEEYKVYGLPSLILFKDG 149
Query: 604 KKL 596
K++
Sbjct: 150 KEV 152
>12_01_1027 + 10529545-10529777,10530269-10530668
Length = 210
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSM-PTFVFVKN 608
I+F A+WC P + I P E A E A Y++N + PTF FVK
Sbjct: 9 IEFGASWCEPSRRIAPVFAEYAKEFAGVVFLKFDIDELEEI-ADSYDVNGVVPTFTFVKA 67
Query: 607 GKKLDEFSGA 578
G+K+D GA
Sbjct: 68 GQKIDMIQGA 77
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIA-SEYNINSMPTFVFV-K 611
++F A WCG CK + P LDE A + SE+++ PT FV
Sbjct: 407 VEFYAPWCGHCKKLAPILDEAATTLKSDKDVVIAKMDATANDVPSEFDVQGYPTLYFVTP 466
Query: 610 NGKKLDEFSGANVD 569
+GK + SG D
Sbjct: 467 SGKMVPYESGRTAD 480
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXIASEYNINSMPTF- 623
++F A WCG CK + P+ ++ A E+ +A++Y I PT
Sbjct: 62 VEFYAPWCGHCKKLAPEYEKAAQELSKHDPPIVLAKVDANDEKNKPLATKYEIQGFPTLK 121
Query: 622 VFVKNGKKLDEFSG 581
+F GK + E+ G
Sbjct: 122 IFRNQGKNIQEYKG 135
>06_03_1048 +
27146475-27146652,27146739-27146804,27146880-27146975,
27147073-27147152,27148165-27148209,27148326-27148420,
27148623-27148632
Length = 189
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -1
Query: 778 FMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGK 602
+ A WCGPC+ + P + ++++ S+ I S+PTF F G+
Sbjct: 106 YTAVWCGPCRAMAPVISKLSSRYPKIPIYKVDIDMDGVGSKLSDLKIFSVPTFHFYYQGR 165
Query: 601 KLDEFSGAN 575
K E GAN
Sbjct: 166 KTGEVVGAN 174
>04_03_0988 -
21469811-21469831,21470823-21471047,21471327-21471634,
21471864-21472234,21472327-21472430,21473086-21473325
Length = 422
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIA---AEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFV 614
+DF A WCG CK + P+LDE A A + + S+Y ++ PT +
Sbjct: 64 VDFYAPWCGHCKRLAPELDEAAPVLAGLSEPIIVAKVNADKYRKLGSKYGVDGFPTLMLF 123
Query: 613 KNGKKLDEFSGA 578
+G + E++G+
Sbjct: 124 IHGVPI-EYTGS 134
>02_04_0182 +
20719782-20720033,20720502-20720605,20720693-20721066,
20721302-20721609,20721853-20722092
Length = 425
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIA---AEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFV 614
+DF A WCG CK + P+LDE A A + + S+Y ++ PT +
Sbjct: 68 VDFYAPWCGHCKRLAPQLDEAAPVLAGLSTPIVVAKVNADKYKKLGSKYGVDGFPTLMLF 127
Query: 613 KNGKKLDEFSGA 578
+G E++G+
Sbjct: 128 DHGTP-TEYTGS 138
>08_02_0497 -
17811413-17811529,17811644-17811724,17812693-17812815,
17812945-17813193
Length = 189
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+DF ATWCGPC ++ ++ +A E +A + + +PT F
Sbjct: 105 VDFYATWCGPCVLMAQDIEMLAVEYENNALFVKVDTDDEYELARDMQVRGLPTLYFFSPD 164
Query: 604 KKLD 593
+ D
Sbjct: 165 QSKD 168
>09_04_0345 +
16876489-16876614,16876718-16876876,16877989-16878102,
16878701-16878882,16879142-16879241,16879597-16879638,
16879818-16879994,16880084-16880175,16880633-16880779,
16880832-16881036
Length = 447
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
++F A WCG C+ + P ++ A + +A EY I PT G
Sbjct: 52 VEFFAPWCGHCQQLTPIWEKAAGVLKGVATVAALDADAHKELAQEYGIRGFPTIKVFVPG 111
Query: 604 KKLDEFSGA 578
K ++ GA
Sbjct: 112 KPPVDYQGA 120
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEM 710
++F A WCG CK + P+ + A +
Sbjct: 188 VEFFAPWCGHCKKLAPEWKKAAKNL 212
>12_01_1031 - 10605581-10606088,10606360-10606420,10606448-10606491,
10606664-10608382,10609848-10610791
Length = 1091
Score = 36.3 bits (80), Expect = 0.027
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASE-YNINSM-PTFVFVK 611
I F + C + I P E A E ++ Y+I + PTF FVK
Sbjct: 1001 IQFTTSRCPASRYIAPAFTEYAKEFAGAVFIKVNVDSDELESVTDWYDIEGIVPTFFFVK 1060
Query: 610 NGKKLDEFSGAN 575
+G+K+D+ GAN
Sbjct: 1061 DGEKIDKIPGAN 1072
>01_03_0161 +
13337265-13337297,13337880-13338017,13338211-13338308,
13338395-13338450,13338664-13338781,13338889-13338916,
13339021-13339112,13339321-13339477,13339569-13339693,
13339785-13339884,13339991-13340059
Length = 337
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAA--EMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVK 611
++F A WCG CK + P +++A+ ++ +A +Y ++ PT F
Sbjct: 142 VEFYAPWCGHCKHLAPIYEKLASVYKLDDGVVIANLDADKHKDLAEKYGVSGYPTLKFFP 201
Query: 610 NGKKLDE 590
G K E
Sbjct: 202 KGNKAGE 208
>10_08_0532 +
18580579-18580746,18581923-18581997,18582659-18583887,
18584853-18585013,18585272-18585279,18587737-18588768
Length = 890
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+ F A WC K + +A + + Y + ++P FVF+K G
Sbjct: 25 VHFWAAWCEASKQMDEVFAHLAVDFSHAVFLRVEAEEQPEI-SEAYGVTAVPYFVFLKEG 83
Query: 604 KKLDEFSGAN 575
K +D GAN
Sbjct: 84 KTVDTLEGAN 93
>05_01_0410 -
3234455-3234466,3234851-3234950,3235037-3235161,
3235244-3235400,3235644-3235735,3235828-3235855,
3235949-3236066,3236411-3236466,3236556-3236653,
3236864-3236948,3237428-3237600
Length = 347
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAA--EMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVK 611
++F A WCG CK + P +++A+ + +A +Y ++ PT F
Sbjct: 171 VEFYAPWCGHCKHLAPIYEKLASVYKQDEGVVIANLDADKHTALAEKYGVSGFPTLKFFP 230
Query: 610 NGKKLDE 590
G K E
Sbjct: 231 KGNKAGE 237
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIA--SEYNINSMPTFVFVK 611
++F A WCG CK + P+ +++ A + S+Y ++ PT +
Sbjct: 52 VEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEHKSVCSKYGVSGYPTIQWFP 111
Query: 610 NG 605
G
Sbjct: 112 KG 113
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 35.5 bits (78), Expect = 0.048
Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIA-SEYNINSMPTFVFVKN 608
++F A WCG C+ + P L+E+A + S++ + P+ F +
Sbjct: 393 LEFYAPWCGHCQKLAPILEEVAVSLKDDEDVVIAKMDGTANDVPSDFAVEGYPSMYFYSS 452
Query: 607 GKKLDEFSGANVD 569
G L + G +
Sbjct: 453 GGNLLPYDGRTAE 465
Score = 29.9 bits (64), Expect = 2.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEM 710
++F A WCG C + P+ + AA +
Sbjct: 47 VEFYAPWCGHCNQLAPEYEAAAAAL 71
>05_05_0229 -
23457438-23457629,23457706-23457828,23457913-23458026,
23462062-23462597,23463258-23464545
Length = 750
Score = 35.1 bits (77), Expect = 0.063
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIA------------AEMXXXXXXXXXXXXXXXXIASEYNI 641
+ F A WC PC+ P E++ + + ++Y++
Sbjct: 649 LKFSAIWCTPCRNAAPLFAELSLKYPDIVFVSVDVDEMPITKMNGIFTLIRQELVTQYDV 708
Query: 640 NSMPTFVFVKNGKKLDEFSGAN 575
+ PTF+F+KN +++D+ G N
Sbjct: 709 RATPTFIFMKNNEEIDKLVGGN 730
>04_04_0782 +
28038292-28038413,28038577-28038778,28039221-28039246,
28039750-28039969
Length = 189
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
I++ A+WC C I P + E + NI PTF F ++G
Sbjct: 111 INYGASWCRVCSQILPPFCRFSNEFKNLTFIYADIDECPE---TTQNIRYTPTFHFYRDG 167
Query: 604 KKLDEFSG 581
+K+DE G
Sbjct: 168 EKVDEMLG 175
>04_03_1011 -
21708503-21708544,21708689-21708898,21709000-21709112,
21709232-21709349,21709386-21709412,21709671-21709808,
21710069-21710194,21710279-21710467,21710598-21710885,
21710937-21711024,21711120-21711298
Length = 505
Score = 31.5 bits (68), Expect = 0.78
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKN 608
++F A WCG C+ L+EIA + I +++ + PT F +
Sbjct: 387 LEFYAPWCGHCRKFALILEEIAVSLQDDQDIVIAKMDGTVNDIPTDFTVEGYPTIYFYSS 446
Query: 607 GKKLDEFSGA 578
L + GA
Sbjct: 447 SGNLLSYDGA 456
Score = 28.3 bits (60), Expect = 7.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDE 725
+ F A WCG CK + P++ +
Sbjct: 54 VKFYAPWCGHCKQLAPEVTD 73
>05_02_0053 -
6152204-6152329,6152817-6152981,6154698-6154883,
6155055-6155078,6155649-6155822
Length = 224
Score = 31.1 bits (67), Expect = 1.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAE 713
++F TWCG C+ + P+L A E
Sbjct: 112 VEFYGTWCGSCRALFPRLCRTAVE 135
>04_04_1248 -
32051679-32052356,32053617-32053778,32054147-32054269,
32054686-32054793
Length = 356
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = -1
Query: 778 FMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKK 599
F A+WC + K +E+A + ++S+ + +MPTF +K+ +
Sbjct: 41 FGASWCVTSLSMNYKFEELA-QTHPEILFLYVDVDDVQSVSSKLGVKAMPTFFLIKDKEV 99
Query: 598 LDEFSGANVD 569
+++ GAN D
Sbjct: 100 VNKIVGANPD 109
>09_06_0265 + 21933913-21933993,21934108-21934404
Length = 125
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 778 FMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEY-NINSMPTFVFVKNGK 602
FMA W P K++ P ++++A+ + + ++PTFV VK +
Sbjct: 32 FMAPWSEPWKLMRPAVEKMASGLKSEEAEVCTISVDRFNTLGRLLRVEALPTFVLVKRHR 91
Query: 601 KLDEFSGANVD 569
+ G N D
Sbjct: 92 AVARVVGVNRD 102
>03_04_0013 +
16436438-16436536,16437257-16437742,16437791-16437826,
16437835-16438323,16438951-16439622
Length = 593
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 778 FMATWCGPCKMIGPKLDEIAAEM 710
F A+WC PC+ PKL E E+
Sbjct: 48 FSASWCPPCRRFTPKLIEAYNEL 70
>03_04_0011 +
16398093-16398170,16401321-16401806,16401892-16402380,
16402810-16403466
Length = 569
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 778 FMATWCGPCKMIGPKLDEIAAEM 710
F A+WC PC+ PKL E E+
Sbjct: 41 FSASWCPPCRRFTPKLIEAYNEL 63
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 778 FMATWCGPCKMIGPKL 731
F A WCGPC+ PKL
Sbjct: 366 FSAKWCGPCRAFLPKL 381
>09_06_0119 -
20969450-20969643,20969767-20970088,20970147-20970380,
20970659-20970789,20970874-20971147
Length = 384
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +1
Query: 391 LQTLKINIFKFITDVKNIFSSFIKNVYMFFFF 486
++ L+ +I ++ + N+ S F+KN++MF F
Sbjct: 190 VRPLQFDISSYVDFLANLASDFVKNLFMFSLF 221
>11_05_0081 -
18924353-18924462,18925068-18925187,18925569-18926086,
18927392-18927471,18927680-18927782,18928084-18928295,
18928392-18929210,18929331-18929444,18929935-18929983,
18930115-18930271,18930354-18930807,18930938-18931147
Length = 981
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 780 TSWRPGADRAR*SGLNWTRS 721
TSWRPG R R G W R+
Sbjct: 9 TSWRPGRRRRRRRGSGWCRT 28
>11_01_0787 + 6578158-6579287,6579439-6580870,6581087-6581097,
6581525-6582125,6583981-6585054,6585745-6585873,
6585925-6585963
Length = 1471
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 166 LSYTLISIGEIIHLSNSDKNKKKTTIHTLKFLSTPLINKK 285
L +I + ++HL K +KK +IH ++ + + NKK
Sbjct: 1119 LPIEVIKLPHLVHLFGKVKLRKKRSIHAVQVIDDIISNKK 1158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,511,364
Number of Sequences: 37544
Number of extensions: 273269
Number of successful extensions: 488
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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