Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11l17
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 71 1e-12
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 62 3e-10
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 62 3e-10
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 56 3e-08
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 56 3e-08
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 56 3e-08
Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical pr... 55 7e-08
AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 54 2e-07
AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 54 2e-07
AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 54 2e-07
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 50 1e-06
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 42 7e-04
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 42 7e-04
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 37 0.014
U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily ass... 37 0.014
AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein. 37 0.014
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 37 0.014
Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical pr... 37 0.019
U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulph... 37 0.019
AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical... 37 0.019
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 37 0.019
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 36 0.025
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 36 0.025
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 36 0.025
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 36 0.043
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 34 0.100
AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical ... 33 0.30
AC024806-1|AAF59524.1| 149|Caenorhabditis elegans Hypothetical ... 31 1.2
U70853-9|AAB09142.2| 158|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF043704-4|AAK21479.1| 109|Caenorhabditis elegans Hypothetical ... 29 2.8
Z48795-2|CAA88726.1| 149|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF068720-8|AAM15583.1| 142|Caenorhabditis elegans Hypothetical ... 29 5.0
Z81044-3|CAB02808.1| 178|Caenorhabditis elegans Hypothetical pr... 28 6.6
U70849-4|AAK67231.1| 179|Caenorhabditis elegans Hypothetical pr... 28 6.6
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 70.5 bits (165), Expect = 1e-12
Identities = 31/68 (45%), Positives = 42/68 (61%)
Frame = -1
Query: 778 FMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKK 599
F A+WCGPC+MI P+++E+AAE + EY INSMPTF+ + +G K
Sbjct: 27 FTASWCGPCQMIKPRVEELAAEHKDRLSILKIDVDECDGVGEEYEINSMPTFLLIVDGIK 86
Query: 598 LDEFSGAN 575
D+FSGAN
Sbjct: 87 KDQFSGAN 94
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/70 (41%), Positives = 40/70 (57%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
IDF A WCGPC+MI P ++ +AE I YNI++MPTF+F+KN
Sbjct: 27 IDFFANWCGPCRMISPIFEQFSAE-YGNATFLKVNCDVARDIVQRYNISAMPTFIFLKNR 85
Query: 604 KKLDEFSGAN 575
+++D GAN
Sbjct: 86 QQVDMVRGAN 95
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/70 (41%), Positives = 40/70 (57%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
IDF A WCGPC+MI P ++ +AE I YNI++MPTF+F+KN
Sbjct: 27 IDFFANWCGPCRMISPIFEQFSAE-YGNATFLKVNCDVARDIVQRYNISAMPTFIFLKNR 85
Query: 604 KKLDEFSGAN 575
+++D GAN
Sbjct: 86 QQVDMVRGAN 95
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/72 (36%), Positives = 35/72 (48%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+DF ATWCGPCK I P E+A + S+Y++ MPTF+F KNG
Sbjct: 32 LDFYATWCGPCKAIAPLYKELAT-THKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNG 90
Query: 604 KKLDEFSGANVD 569
++ G D
Sbjct: 91 DAIEALEGCVED 102
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/72 (36%), Positives = 35/72 (48%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+DF ATWCGPCK I P E+A + S+Y++ MPTF+F KNG
Sbjct: 31 LDFYATWCGPCKAIAPLYKELAT-THKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNG 89
Query: 604 KKLDEFSGANVD 569
++ G D
Sbjct: 90 DAIEALEGCVED 101
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/72 (36%), Positives = 35/72 (48%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+DF ATWCGPCK I P E+A + S+Y++ MPTF+F KNG
Sbjct: 31 LDFYATWCGPCKAIAPLYKELAT-THKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNG 89
Query: 604 KKLDEFSGANVD 569
++ G D
Sbjct: 90 DAIEALEGCVED 101
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/72 (36%), Positives = 35/72 (48%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+DF ATWCGPCK I P E+A + S+Y++ MPTF+F KNG
Sbjct: 32 LDFYATWCGPCKAIAPLYKELAT-THKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNG 90
Query: 604 KKLDEFSGANVD 569
++ G D
Sbjct: 91 DAIEALEGCVED 102
>Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical
protein B0024.9 protein.
Length = 119
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+DF A WCGPC+ +GP+L+E +A +Y I+++PT KNG
Sbjct: 35 VDFHAEWCGPCQALGPRLEEKVNGRQGSVLLAKINVDHAGELAMDYGISAVPTVFAFKNG 94
Query: 604 KKLDEFSG 581
+K+ FSG
Sbjct: 95 EKISGFSG 102
>AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like
protein protein.
Length = 284
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+DF A WCGPCKMI P E + +SE +NSMPTF+ ++G
Sbjct: 26 VDFTAVWCGPCKMIAPTF-EALSNQYLGAVFLKVDVEICEKTSSENGVNSMPTFMVFQSG 84
Query: 604 KKLDEFSGAN 575
++++ GA+
Sbjct: 85 VRVEQMKGAD 94
>AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like
protein TXL protein.
Length = 284
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+DF A WCGPCKMI P E + +SE +NSMPTF+ ++G
Sbjct: 26 VDFTAVWCGPCKMIAPTF-EALSNQYLGAVFLKVDVEICEKTSSENGVNSMPTFMVFQSG 84
Query: 604 KKLDEFSGAN 575
++++ GA+
Sbjct: 85 VRVEQMKGAD 94
>AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical
protein Y54E10A.3 protein.
Length = 284
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+DF A WCGPCKMI P E + +SE +NSMPTF+ ++G
Sbjct: 26 VDFTAVWCGPCKMIAPTF-EALSNQYLGAVFLKVDVEICEKTSSENGVNSMPTFMVFQSG 84
Query: 604 KKLDEFSGAN 575
++++ GA+
Sbjct: 85 VRVEQMKGAD 94
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+DF A+WCGPC+ I P ++ A A+ Y +N+MPTF+ NG
Sbjct: 26 VDFTASWCGPCQYIAPIFSDL-ANQYKGSVFLKVDVDECRGTAATYGVNAMPTFIAFVNG 84
Query: 604 KKLDEFSGAN 575
+K GA+
Sbjct: 85 QKKATIQGAD 94
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+ F A+W C+ + LD++ AE+ I+ + I + PT VF NG
Sbjct: 24 LHFYASWAPSCEQVNQLLDDLLAEIALPLRAAFIDAEALPGISLNFKITAAPTLVFFSNG 83
Query: 604 KKLDEFSG 581
K++D G
Sbjct: 84 KEVDRIDG 91
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+ F A+W C+ + LD++ AE+ I+ + I + PT VF NG
Sbjct: 24 LHFYASWAPSCEQVNQLLDDLLAEIALPLRAAFIDAEALPGISLNFKITAAPTLVFFSNG 83
Query: 604 KKLDEFSG 581
K++D G
Sbjct: 84 KEVDRIDG 91
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEM---XXXXXXXXXXXXXXXXIASEYNINSMPTFVFV 614
++F A WCG CK + P+ ++ A ++ + ++Y ++ PT +
Sbjct: 169 VEFYAPWCGHCKKLAPEYEKAAQKLKAQGSKVKLGKVDATIEKDLGTKYGVSGYPTMKII 228
Query: 613 KNGKKLD 593
+NG++ D
Sbjct: 229 RNGRRFD 235
Score = 34.7 bits (76), Expect = 0.075
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
+ F A WCG CK + P+ ++ ++++ + + I PT F K+G
Sbjct: 58 VKFYAPWCGHCKHLAPEYEKASSKV--SIPLAKVDATVETELGKRFEIQGYPTLKFWKDG 115
Query: 604 KKLDEFSG 581
K +++ G
Sbjct: 116 KGPNDYDG 123
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEM--XXXXXXXXXXXXXXXXIASEYNINSMPTFVFVK 611
I+F A WCG CK K E+A + S++ + PT F
Sbjct: 522 IEFYAPWCGHCKSFESKYVELAQALKKTQPNVVLAKMDATINDAPSQFAVEGFPTIYFAP 581
Query: 610 NGKKLD--EFSG 581
GKK + ++SG
Sbjct: 582 AGKKSEPIKYSG 593
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPT-FVFVKN 608
I+F A WCG CK + PK +E+A ++ + + + PT F KN
Sbjct: 385 IEFYAPWCGHCKSLAPKYEELAEKLNKEDVIIAKMDATANDVPPMFEVRGFPTLFWLPKN 444
Query: 607 GK 602
K
Sbjct: 445 AK 446
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIA---AEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFV 614
+ F A WCG CK I P+ + A A + ++ + PT
Sbjct: 42 VKFYAPWCGHCKKIAPEYERAAPKLASNDPPVALVKVDCTTEKTVCDKFGVKGFPTLKIF 101
Query: 613 KNGKKLDEFSG 581
+NG ++ G
Sbjct: 102 RNGVPAQDYDG 112
>U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily
assigned gene nameprotein 320 protein.
Length = 440
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTF-VFVKN 608
++F A WCG CK + P+ + A+ + + YN+ PT +F +
Sbjct: 47 VEFYAPWCGHCKSLVPEYKKAASALKGVAKVGAVDMTQHQSVGGPYNVQGFPTLKIFGAD 106
Query: 607 GKKLDEFSG 581
KK +++G
Sbjct: 107 KKKPTDYNG 115
Score = 35.1 bits (77), Expect = 0.057
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
++F A WCG CK + P+ A+E+ +A+++ I PT + G
Sbjct: 187 VEFFAPWCGHCKSLEPQWKAAASELKGKVRLGALDATVHTVVANKFAIRGFPTIKYFAPG 246
Query: 604 KKLDE 590
+ +
Sbjct: 247 SDVSD 251
>AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein.
Length = 542
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = -1
Query: 649 YNINSMPTFVFVKNGKKLDEFSGAN 575
YNI++MPTF+F+KN +++D GAN
Sbjct: 7 YNISAMPTFIFLKNRQQVDMVRGAN 31
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein.
Length = 488
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPT-FVFVKN 608
I+F A WCG CK + PK +E+A ++ + + + PT F KN
Sbjct: 385 IEFYAPWCGHCKSLAPKYEELAEKLNKEDVIIAKMDATANDVPPMFEVRGFPTLFWLPKN 444
Query: 607 GK 602
K
Sbjct: 445 AK 446
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIA---AEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFV 614
+ F A WCG CK I P+ + A A + ++ + PT
Sbjct: 42 VKFYAPWCGHCKKIAPEYERAAPKLASNDPPVALVKVDCTTEKTVCDKFGVKGFPTLKIF 101
Query: 613 KNGKKLDEFSG 581
+NG ++ G
Sbjct: 102 RNGVPAQDYDG 112
>Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical
protein C14B1.1 protein.
Length = 485
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIA---AEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFV 614
+ F A WC CK + PK DE A E +AS++ + PT ++
Sbjct: 45 VKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQALASKFEVRGYPTILYF 104
Query: 613 KNGK 602
K+GK
Sbjct: 105 KSGK 108
Score = 34.3 bits (75), Expect = 0.100
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPT 626
+ F A WCG CK + P DE+A + ++ +NS PT
Sbjct: 386 VKFYAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATLNELADVKVNSFPT 438
>U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulphide
isomerase isoformI protein.
Length = 485
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIA---AEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFV 614
+ F A WC CK + PK DE A E +AS++ + PT ++
Sbjct: 45 VKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQALASKFEVRGYPTILYF 104
Query: 613 KNGK 602
K+GK
Sbjct: 105 KSGK 108
Score = 34.3 bits (75), Expect = 0.100
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPT 626
+ F A WCG CK + P DE+A + ++ +NS PT
Sbjct: 386 VKFYAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATLNELADVKVNSFPT 438
>AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical
protein Y47H9C.5b protein.
Length = 318
Score = 36.7 bits (81), Expect = 0.019
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEM 710
+DF A WCGPC+ + P+L + A ++
Sbjct: 104 VDFFAPWCGPCQQLAPELQKAARQI 128
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEM 710
+DF A WCG C P D+IA E+
Sbjct: 222 VDFFAPWCGHCIQFAPIYDQIAKEL 246
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 36.7 bits (81), Expect = 0.019
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEM 710
+DF A WCGPC+ + P+L + A ++
Sbjct: 574 VDFFAPWCGPCQQLAPELQKAARQI 598
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEM 710
+DF A WCG C P D+IA E+
Sbjct: 692 VDFFAPWCGHCIQFAPIYDQIAKEL 716
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
++F A WCG CK + P D++ + + I S PT F G
Sbjct: 330 VEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDSTLNEVEDVKIQSFPTIKFFPAG 389
Query: 604 -KKLDEFSG 581
K+ +++G
Sbjct: 390 SNKVVDYTG 398
Score = 34.3 bits (75), Expect = 0.100
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXI---ASEYNINSMPTFVFV 614
++F A WCG CK + P+ + A ++ +S++ + PT
Sbjct: 45 VEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTLKLF 104
Query: 613 KNGKKLDEFSG 581
+NGK E++G
Sbjct: 105 RNGKP-QEYNG 114
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform c protein.
Length = 371
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
++F A WCG CK + P D++ + + I S PT F G
Sbjct: 264 VEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDSTLNEVEDVKIQSFPTIKFFPAG 323
Query: 604 -KKLDEFSG 581
K+ +++G
Sbjct: 324 SNKVVDYTG 332
Score = 34.3 bits (75), Expect = 0.100
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXI---ASEYNINSMPTFVFV 614
++F A WCG CK + P+ + A ++ +S++ + PT
Sbjct: 45 VEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTLKLF 104
Query: 613 KNGKKLDEFSG 581
+NGK E++G
Sbjct: 105 RNGKP-QEYNG 114
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
++F A WCG CK + P D++ + + I S PT F G
Sbjct: 386 VEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDSTLNEVEDVKIQSFPTIKFFPAG 445
Query: 604 -KKLDEFSG 581
K+ +++G
Sbjct: 446 SNKVVDYTG 454
Score = 34.3 bits (75), Expect = 0.100
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXI---ASEYNINSMPTFVFV 614
++F A WCG CK + P+ + A ++ +S++ + PT
Sbjct: 45 VEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTLKLF 104
Query: 613 KNGKKLDEFSG 581
+NGK E++G
Sbjct: 105 RNGKP-QEYNG 114
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 35.5 bits (78), Expect = 0.043
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNG 605
++F A WCG C+ + P+ + A EM IA ++ I PT F G
Sbjct: 177 VEFFAPWCGHCQKLEPEWKKAAEEMGGRVKFGALDATAHESIAQKFGIRGFPTIKFFAPG 236
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 34.3 bits (75), Expect = 0.100
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIA---AEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFV 614
++F A WC CK + P D++ ++ +A++ +I PT +F
Sbjct: 48 VEFYAPWCAHCKRLHPVWDQVGHTLSDSNLPIRVGKLDCTRFPAVANKLSIQGYPTILFF 107
Query: 613 KNGKKLDEFSG 581
+NG +D G
Sbjct: 108 RNGHVIDYRGG 118
>AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical
protein Y73B6BL.12 protein.
Length = 228
Score = 32.7 bits (71), Expect = 0.30
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEM 710
+DF A WCG C P D IA E+
Sbjct: 132 VDFFAPWCGHCIQFAPIYDRIAKEL 156
>AC024806-1|AAF59524.1| 149|Caenorhabditis elegans Hypothetical
protein Y52E8A.3 protein.
Length = 149
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 778 FMATWCGPCKMIGPKLDEIAAEM 710
F A+WC PC+ PKL E E+
Sbjct: 33 FSASWCPPCRAFTPKLKEFFEEI 55
>U70853-9|AAB09142.2| 158|Caenorhabditis elegans Hypothetical
protein M01H9.1 protein.
Length = 158
Score = 29.9 bits (64), Expect = 2.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 778 FMATWCGPCKMIGPKLDEI 722
F A+WCGPC+ P + E+
Sbjct: 34 FSASWCGPCRQFTPIMKEL 52
>AF043704-4|AAK21479.1| 109|Caenorhabditis elegans Hypothetical
protein W01B11.6a protein.
Length = 109
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 778 FMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASE-YNINSMPTFVFVKNGK 602
F C C+ I P D++ + + + + +N++PTFV + NG+
Sbjct: 28 FYGERCPSCESIKPLFDDLCKKYEKTALVYTYPCYNDDQLTGDAFAVNAVPTFVVMNNGE 87
Query: 601 KLDEFSGANVD 569
++ GA +
Sbjct: 88 EVTRHVGAEAE 98
>Z48795-2|CAA88726.1| 149|Caenorhabditis elegans Hypothetical
protein R05H5.3 protein.
Length = 149
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 778 FMATWCGPCKMIGPKLDEIAAEM 710
F A+WC PC+ PKL E+
Sbjct: 33 FSASWCPPCRQFTPKLTRFFDEI 55
>AF068720-8|AAM15583.1| 142|Caenorhabditis elegans Hypothetical
protein K02H11.6 protein.
Length = 142
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 784 IDFMATWCGPCKMIGPKLDEIAAEM 710
I F A WCGPC+ P L + E+
Sbjct: 30 IYFSAHWCGPCRNFTPVLKDFYEEV 54
>Z81044-3|CAB02808.1| 178|Caenorhabditis elegans Hypothetical
protein C30H6.8 protein.
Length = 178
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 778 FMATWCGPCKMIGPKL 731
F A WCG CK + PK+
Sbjct: 58 FSAGWCGSCKFLTPKI 73
>U70849-4|AAK67231.1| 179|Caenorhabditis elegans Hypothetical
protein F29B9.5 protein.
Length = 179
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 778 FMATWCGPCKMIGPKL 731
F A WC PCK PKL
Sbjct: 61 FSAGWCPPCKQFTPKL 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,164,640
Number of Sequences: 27780
Number of extensions: 287780
Number of successful extensions: 689
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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