Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11l10
(491 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015261-1|AAT94490.1| 1411|Drosophila melanogaster LD39963p pro... 29 3.4
AY118694-1|AAM50554.1| 360|Drosophila melanogaster AT18267p pro... 29 3.4
AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-P... 29 3.4
AE014298-2473|AAN09422.1| 388|Drosophila melanogaster CG32574-P... 29 3.4
AE014134-2036|AAF53075.1| 1411|Drosophila melanogaster CG4738-PA... 29 3.4
U88570-1|AAB53050.1| 3190|Drosophila melanogaster CREB-binding p... 28 6.0
AY058635-1|AAL13864.1| 748|Drosophila melanogaster LD33277p pro... 28 6.0
AE014298-1361|AAF46516.2| 3276|Drosophila melanogaster CG15319-P... 28 6.0
AE014134-2328|AAF53283.3| 708|Drosophila melanogaster CG16970-P... 28 6.0
U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade pro... 28 7.9
BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p pro... 28 7.9
AY052044-1|AAK93468.1| 581|Drosophila melanogaster LP06006p pro... 28 7.9
AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB... 28 7.9
>BT015261-1|AAT94490.1| 1411|Drosophila melanogaster LD39963p
protein.
Length = 1411
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 206 PPPYQYCITMGRGGEDCSVECGFALSP 126
PPP +YC+TM +G + C + P
Sbjct: 389 PPPDRYCLTMEQGVDPRETYCSYIFHP 415
>AY118694-1|AAM50554.1| 360|Drosophila melanogaster AT18267p
protein.
Length = 360
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 272 SMRGFDPTPHPPLGWGVLTRYSPPPYQ 192
S GF PTP+ +G+G L Y P YQ
Sbjct: 105 SFTGFGPTPN--IGFGALAGYQAPTYQ 129
>AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-PA
protein.
Length = 1895
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 168 PSPHRYTILIGGRTVAGKNTPSQRGVGGGVKAPHG 272
P PH + + G +A KN+P +GG V+ G
Sbjct: 727 PHPHPHPGMQAGNPMASKNSPQPHRLGGAVRFQDG 761
>AE014298-2473|AAN09422.1| 388|Drosophila melanogaster CG32574-PA
protein.
Length = 388
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 272 SMRGFDPTPHPPLGWGVLTRYSPPPYQ 192
S GF PTP+ +G+G L Y P YQ
Sbjct: 133 SFTGFGPTPN--IGFGALAGYQAPTYQ 157
>AE014134-2036|AAF53075.1| 1411|Drosophila melanogaster CG4738-PA
protein.
Length = 1411
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 206 PPPYQYCITMGRGGEDCSVECGFALSP 126
PPP +YC+TM +G + C + P
Sbjct: 389 PPPDRYCLTMEQGVDPRETYCSYIFHP 415
>U88570-1|AAB53050.1| 3190|Drosophila melanogaster CREB-binding
protein homolog protein.
Length = 3190
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +1
Query: 199 GGGL*RVRTPHPKGGWGVGSKPLMEIGCTYGVQPRSPYGGPAKXVXGVGLEADETXL 369
GGG V H G G+G+ P+ G GV+P GG G GL + L
Sbjct: 2763 GGGQMPVGGQHGGMGMGMGAPPMA--GTVGGVRPSPGAGGGGGSATGGGLNTQQLAL 2817
>AY058635-1|AAL13864.1| 748|Drosophila melanogaster LD33277p
protein.
Length = 748
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +1
Query: 199 GGGL*RVRTPHPKGGWGVGSKPLMEIGCTYGVQPRSPYGGPAKXVXGVGLEADETXL 369
GGG V H G G+G+ P+ G GV+P GG G GL + L
Sbjct: 235 GGGQMPVGGQHGGMGMGMGAPPMA--GTVGGVRPSPGAGGGGGSATGGGLNTQQLAL 289
>AE014298-1361|AAF46516.2| 3276|Drosophila melanogaster CG15319-PB
protein.
Length = 3276
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +1
Query: 199 GGGL*RVRTPHPKGGWGVGSKPLMEIGCTYGVQPRSPYGGPAKXVXGVGLEADETXL 369
GGG V H G G+G+ P+ G GV+P GG G GL + L
Sbjct: 2763 GGGQMPVGGQHGGMGMGMGAPPMA--GTVGGVRPSPGAGGGGGSATGGGLNTQQLAL 2817
>AE014134-2328|AAF53283.3| 708|Drosophila melanogaster CG16970-PA
protein.
Length = 708
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +3
Query: 123 YGGESESALHATVLSPSPHRYTILIGGRTVAGKNTPSQRGVGGG 254
YGG +LH+ +P H Y G G + G GGG
Sbjct: 424 YGGSGRDSLHSHK-TPPQHEYQTEHGSAAAGGAGSAGSDGRGGG 466
>U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade
protein.
Length = 1047
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 249 PPPPFGMGCSYPLQSSPLSILYN 181
PPPP G +YP Q+ P S + N
Sbjct: 591 PPPPIGPPQAYPPQTPPYSYMNN 613
>BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p
protein.
Length = 1047
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 249 PPPPFGMGCSYPLQSSPLSILYN 181
PPPP G +YP Q+ P S + N
Sbjct: 591 PPPPIGPPQAYPPQTPPYSYMNN 613
>AY052044-1|AAK93468.1| 581|Drosophila melanogaster LP06006p
protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 249 PPPPFGMGCSYPLQSSPLSILYN 181
PPPP G +YP Q+ P S + N
Sbjct: 125 PPPPIGPPQAYPPQTPPYSYMNN 147
>AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB
protein.
Length = 1047
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 249 PPPPFGMGCSYPLQSSPLSILYN 181
PPPP G +YP Q+ P S + N
Sbjct: 591 PPPPIGPPQAYPPQTPPYSYMNN 613
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,947,091
Number of Sequences: 53049
Number of extensions: 601424
Number of successful extensions: 1457
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1453
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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