Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11l06
(785 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022529-1|AAY54945.1| 255|Drosophila melanogaster IP06473p pro... 76 6e-14
AE014296-2036|AAF50005.2| 255|Drosophila melanogaster CG14130-P... 76 6e-14
AY058549-1|AAL13778.1| 738|Drosophila melanogaster LD24661p pro... 33 0.58
AE013599-2731|AAF57664.2| 738|Drosophila melanogaster CG5341-PA... 33 0.58
AY071524-1|AAL49146.1| 160|Drosophila melanogaster RE57135p pro... 32 1.0
AE014298-248|AAF45660.2| 160|Drosophila melanogaster CG14798-PA... 32 1.0
AE014298-247|AAN09055.1| 237|Drosophila melanogaster CG14798-PB... 32 1.0
BT003536-1|AAO39540.1| 290|Drosophila melanogaster RE08706p pro... 29 5.4
AY060472-1|AAL25511.1| 411|Drosophila melanogaster SD06439p pro... 29 5.4
AY043264-1|AAK85311.1| 411|Drosophila melanogaster MKP-3-like p... 29 5.4
AE014296-3102|AAF49192.2| 411|Drosophila melanogaster CG14080-P... 29 5.4
>BT022529-1|AAY54945.1| 255|Drosophila melanogaster IP06473p
protein.
Length = 255
Score = 75.8 bits (178), Expect = 6e-14
Identities = 31/60 (51%), Positives = 46/60 (76%)
Frame = -2
Query: 781 PENQVILDRVKALAFTTDTLPHVHVLDLAAAGFIKPHIDAVRFCGDVIAGVCLCSSAVMR 602
P+N+ IL+RV+ +AF +P+VH+LDLA G IKPH+D+ R+CG+ I+G+ L S +VMR
Sbjct: 100 PKNREILERVRQVAFDGAVMPYVHILDLAPDGVIKPHVDSTRYCGNTISGISLLSDSVMR 159
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 541 YVMKGVARYEFTHAVLGGERSQW 473
Y+M ARY+FTH +L E SQ+
Sbjct: 214 YIMSHTARYKFTHEILAKEHSQF 236
>AE014296-2036|AAF50005.2| 255|Drosophila melanogaster CG14130-PA
protein.
Length = 255
Score = 75.8 bits (178), Expect = 6e-14
Identities = 31/60 (51%), Positives = 46/60 (76%)
Frame = -2
Query: 781 PENQVILDRVKALAFTTDTLPHVHVLDLAAAGFIKPHIDAVRFCGDVIAGVCLCSSAVMR 602
P+N+ IL+RV+ +AF +P+VH+LDLA G IKPH+D+ R+CG+ I+G+ L S +VMR
Sbjct: 100 PKNREILERVRQVAFDGAVMPYVHILDLAPDGVIKPHVDSTRYCGNTISGISLLSDSVMR 159
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 541 YVMKGVARYEFTHAVLGGERSQW 473
Y+M ARY+FTH +L E SQ+
Sbjct: 214 YIMSHTARYKFTHEILAKEHSQF 236
>AY058549-1|AAL13778.1| 738|Drosophila melanogaster LD24661p
protein.
Length = 738
Score = 32.7 bits (71), Expect = 0.58
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 171 KARILIPVSAHPVRKKPTKIIILVHYLRT*LKNLYFKNEQQKTLGY*P 314
K R+++ + + +RKKPT I+ + + KN F +QQK G+ P
Sbjct: 192 KLRLILSRTLNTLRKKPTIIVTALRIIEREEKNDQFALQQQKVTGFLP 239
>AE013599-2731|AAF57664.2| 738|Drosophila melanogaster CG5341-PA
protein.
Length = 738
Score = 32.7 bits (71), Expect = 0.58
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 171 KARILIPVSAHPVRKKPTKIIILVHYLRT*LKNLYFKNEQQKTLGY*P 314
K R+++ + + +RKKPT I+ + + KN F +QQK G+ P
Sbjct: 192 KLRLILSRTLNTLRKKPTIIVTALRIIEREEKNDQFALQQQKVTGFLP 239
>AY071524-1|AAL49146.1| 160|Drosophila melanogaster RE57135p
protein.
Length = 160
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 777 RTKSYWTALKR*PSQXTHYRTCTSWTWPPLGS*SRILTLSD 655
+T+ W + PS +CTSWTW L SR T D
Sbjct: 17 KTRPRWITSREFPSVSRSCPSCTSWTWLTLARSSRTWTTLD 57
Score = 28.7 bits (61), Expect = 9.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 541 YVMKGVARYEFTHAVLGGERS 479
Y+ +ARYEFTH +L ++S
Sbjct: 96 YIKSALARYEFTHEILARDQS 116
>AE014298-248|AAF45660.2| 160|Drosophila melanogaster CG14798-PA,
isoform A protein.
Length = 160
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 777 RTKSYWTALKR*PSQXTHYRTCTSWTWPPLGS*SRILTLSD 655
+T+ W + PS +CTSWTW L SR T D
Sbjct: 17 KTRPRWITSREFPSVSRSCPSCTSWTWLTLARSSRTWTTLD 57
Score = 28.7 bits (61), Expect = 9.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 541 YVMKGVARYEFTHAVLGGERS 479
Y+ +ARYEFTH +L ++S
Sbjct: 96 YIKSALARYEFTHEILARDQS 116
>AE014298-247|AAN09055.1| 237|Drosophila melanogaster CG14798-PB,
isoform B protein.
Length = 237
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 777 RTKSYWTALKR*PSQXTHYRTCTSWTWPPLGS*SRILTLSD 655
+T+ W + PS +CTSWTW L SR T D
Sbjct: 94 KTRPRWITSREFPSVSRSCPSCTSWTWLTLARSSRTWTTLD 134
Score = 28.7 bits (61), Expect = 9.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 541 YVMKGVARYEFTHAVLGGERS 479
Y+ +ARYEFTH +L ++S
Sbjct: 173 YIKSALARYEFTHEILARDQS 193
>BT003536-1|AAO39540.1| 290|Drosophila melanogaster RE08706p
protein.
Length = 290
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 236 YNNFRWLFPDWVCRDRNQYSS 174
+NNFR FP+W C D NQ S
Sbjct: 16 FNNFRQAFPEW-CEDDNQTHS 35
>AY060472-1|AAL25511.1| 411|Drosophila melanogaster SD06439p
protein.
Length = 411
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 236 YNNFRWLFPDWVCRDRNQYSS 174
+NNFR FP+W C D NQ S
Sbjct: 137 FNNFRQAFPEW-CEDDNQTHS 156
>AY043264-1|AAK85311.1| 411|Drosophila melanogaster MKP-3-like
protein protein.
Length = 411
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 236 YNNFRWLFPDWVCRDRNQYSS 174
+NNFR FP+W C D NQ S
Sbjct: 137 FNNFRQAFPEW-CEDDNQTHS 156
>AE014296-3102|AAF49192.2| 411|Drosophila melanogaster CG14080-PB,
isoform B protein.
Length = 411
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 236 YNNFRWLFPDWVCRDRNQYSS 174
+NNFR FP+W C D NQ S
Sbjct: 137 FNNFRQAFPEW-CEDDNQTHS 156
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,393,921
Number of Sequences: 53049
Number of extensions: 444585
Number of successful extensions: 979
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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