Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11l05
         (380 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X59357-1|CAA42007.1|  128|Homo sapiens Epstein-Barr virus small ...    38   0.011
D17652-1|BAA04545.1|  128|Homo sapiens HBp15/L22 protein.              38   0.011
CR456873-1|CAG33154.1|  128|Homo sapiens RPL22 protein.                38   0.011
BC066314-1|AAH66314.1|  128|Homo sapiens ribosomal protein L22 p...    38   0.011
BC058887-1|AAH58887.1|  128|Homo sapiens ribosomal protein L22 p...    38   0.011
BC035566-1|AAH35566.1|  128|Homo sapiens ribosomal protein L22 p...    38   0.011
AL031847-9|CAI19448.1|  128|Homo sapiens ribosomal protein L22 p...    38   0.011
AF136171-1|AAP97261.1|  128|Homo sapiens heparin-binding protein...    38   0.011
AB061849-1|BAB79487.1|   39|Homo sapiens ribosomal protein L22 p...    37   0.025
BC107708-1|AAI07709.1|  122|Homo sapiens RPL22L1 protein protein.      28   8.7  
BC062731-1|AAH62731.1|  132|Homo sapiens RPL22L1 protein protein.      28   8.7  

>X59357-1|CAA42007.1|  128|Homo sapiens Epstein-Barr virus small RNA
            associated protein protein.
          Length = 128

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -3

Query: 216 LKFTIDCTHPAEDSILDTFLFQR 148
           LKFT+DCTHP ED I+D   F++
Sbjct: 19  LKFTLDCTHPVEDGIMDAANFEQ 41


>D17652-1|BAA04545.1|  128|Homo sapiens HBp15/L22 protein.
          Length = 128

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -3

Query: 216 LKFTIDCTHPAEDSILDTFLFQR 148
           LKFT+DCTHP ED I+D   F++
Sbjct: 19  LKFTLDCTHPVEDGIMDAANFEQ 41


>CR456873-1|CAG33154.1|  128|Homo sapiens RPL22 protein.
          Length = 128

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -3

Query: 216 LKFTIDCTHPAEDSILDTFLFQR 148
           LKFT+DCTHP ED I+D   F++
Sbjct: 19  LKFTLDCTHPVEDGIMDAANFEQ 41


>BC066314-1|AAH66314.1|  128|Homo sapiens ribosomal protein L22
           protein.
          Length = 128

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -3

Query: 216 LKFTIDCTHPAEDSILDTFLFQR 148
           LKFT+DCTHP ED I+D   F++
Sbjct: 19  LKFTLDCTHPVEDGIMDAANFEQ 41


>BC058887-1|AAH58887.1|  128|Homo sapiens ribosomal protein L22
           protein.
          Length = 128

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -3

Query: 216 LKFTIDCTHPAEDSILDTFLFQR 148
           LKFT+DCTHP ED I+D   F++
Sbjct: 19  LKFTLDCTHPVEDGIMDAANFEQ 41


>BC035566-1|AAH35566.1|  128|Homo sapiens ribosomal protein L22
           protein.
          Length = 128

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -3

Query: 216 LKFTIDCTHPAEDSILDTFLFQR 148
           LKFT+DCTHP ED I+D   F++
Sbjct: 19  LKFTLDCTHPVEDGIMDAANFEQ 41


>AL031847-9|CAI19448.1|  128|Homo sapiens ribosomal protein L22
           protein.
          Length = 128

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -3

Query: 216 LKFTIDCTHPAEDSILDTFLFQR 148
           LKFT+DCTHP ED I+D   F++
Sbjct: 19  LKFTLDCTHPVEDGIMDAANFEQ 41


>AF136171-1|AAP97261.1|  128|Homo sapiens heparin-binding protein
           HBp15 protein.
          Length = 128

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -3

Query: 216 LKFTIDCTHPAEDSILDTFLFQR 148
           LKFT+DCTHP ED I+D   F++
Sbjct: 19  LKFTLDCTHPVEDGIMDAANFEQ 41


>AB061849-1|BAB79487.1|   39|Homo sapiens ribosomal protein L22
           protein.
          Length = 39

 Score = 36.7 bits (81), Expect = 0.025
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -3

Query: 216 LKFTIDCTHPAEDSILDTFLF 154
           LKFT+DCTHP ED I+D   F
Sbjct: 19  LKFTLDCTHPVEDGIMDAANF 39


>BC107708-1|AAI07709.1|  122|Homo sapiens RPL22L1 protein protein.
          Length = 122

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 213 KFTIDCTHPAEDSILDTFLFQR 148
           +F +D THP ED I D+  F++
Sbjct: 15  RFNLDLTHPVEDGIFDSGNFEQ 36


>BC062731-1|AAH62731.1|  132|Homo sapiens RPL22L1 protein protein.
          Length = 132

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 213 KFTIDCTHPAEDSILDTFLFQR 148
           +F +D THP ED I D+  F++
Sbjct: 25  RFNLDLTHPVEDGIFDSGNFEQ 46


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,619,702
Number of Sequences: 237096
Number of extensions: 702140
Number of successful extensions: 1198
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)