Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11l05
(380 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42587-1|AAB17433.1| 299|Drosophila melanogaster ribosomal prot... 34 0.054
BT025837-1|ABF85737.1| 299|Drosophila melanogaster IP11377p pro... 34 0.054
AY118961-1|AAM50821.1| 299|Drosophila melanogaster LD40873p pro... 34 0.054
AL132792-4|CAB60023.1| 299|Drosophila melanogaster EG:BACR19J1.... 34 0.054
AF080131-1|AAD19341.1| 312|Drosophila melanogaster ribosomal pr... 34 0.054
AE014298-104|AAF45546.1| 299|Drosophila melanogaster CG7434-PA ... 34 0.054
AE013599-1487|AAF58510.2| 246|Drosophila melanogaster CG13154-P... 30 0.88
AY119657-1|AAM50311.1| 825|Drosophila melanogaster SD04373p pro... 29 2.0
AF241795-1|AAF64049.1| 587|Drosophila melanogaster E protein tr... 29 2.0
AF241794-1|AAF64048.1| 698|Drosophila melanogaster E protein tr... 29 2.0
AE014298-2089|AAF48412.1| 700|Drosophila melanogaster CG32594-P... 29 2.0
AE014298-2088|AAF48413.2| 825|Drosophila melanogaster CG32594-P... 29 2.0
U46688-1|AAB02195.1| 754|Drosophila melanogaster D-stat protein... 27 8.2
U40070-1|AAC46984.1| 761|Drosophila melanogaster stat protein. 27 8.2
BT021314-1|AAX33462.1| 761|Drosophila melanogaster RE13194p pro... 27 8.2
AY094839-1|AAM11192.1| 466|Drosophila melanogaster LP05693p pro... 27 8.2
AE014297-2803|AAX52969.1| 635|Drosophila melanogaster CG4257-PG... 27 8.2
AE014297-2802|AAN14351.2| 628|Drosophila melanogaster CG4257-PB... 27 8.2
AE014297-2801|AAS65180.1| 761|Drosophila melanogaster CG4257-PF... 27 8.2
AE014297-2800|AAF55773.2| 754|Drosophila melanogaster CG4257-PE... 27 8.2
AE014297-2799|AAN14350.2| 754|Drosophila melanogaster CG4257-PC... 27 8.2
>U42587-1|AAB17433.1| 299|Drosophila melanogaster ribosomal protein
Rpl22 protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.054
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = -3
Query: 219 NLKFTIDCTHPAEDSILDTFLFQR 148
+L+FTIDCT+ AEDSI+D F++
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEK 213
>BT025837-1|ABF85737.1| 299|Drosophila melanogaster IP11377p
protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.054
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = -3
Query: 219 NLKFTIDCTHPAEDSILDTFLFQR 148
+L+FTIDCT+ AEDSI+D F++
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEK 213
>AY118961-1|AAM50821.1| 299|Drosophila melanogaster LD40873p
protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.054
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = -3
Query: 219 NLKFTIDCTHPAEDSILDTFLFQR 148
+L+FTIDCT+ AEDSI+D F++
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEK 213
>AL132792-4|CAB60023.1| 299|Drosophila melanogaster
EG:BACR19J1.4,FBgn0015288;RpL22 protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.054
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = -3
Query: 219 NLKFTIDCTHPAEDSILDTFLFQR 148
+L+FTIDCT+ AEDSI+D F++
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEK 213
>AF080131-1|AAD19341.1| 312|Drosophila melanogaster ribosomal
protein L22 protein.
Length = 312
Score = 34.3 bits (75), Expect = 0.054
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = -3
Query: 219 NLKFTIDCTHPAEDSILDTFLFQR 148
+L+FTIDCT+ AEDSI+D F++
Sbjct: 203 SLRFTIDCTNIAEDSIMDVADFEK 226
>AE014298-104|AAF45546.1| 299|Drosophila melanogaster CG7434-PA
protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.054
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = -3
Query: 219 NLKFTIDCTHPAEDSILDTFLFQR 148
+L+FTIDCT+ AEDSI+D F++
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEK 213
>AE013599-1487|AAF58510.2| 246|Drosophila melanogaster CG13154-PA
protein.
Length = 246
Score = 30.3 bits (65), Expect = 0.88
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 357 LLYTCSFATMAVTKKPVAKKAQLH 286
+L+ C+F V K P A++AQLH
Sbjct: 12 VLFLCAFCCSVVAKPPTARRAQLH 35
>AY119657-1|AAM50311.1| 825|Drosophila melanogaster SD04373p
protein.
Length = 825
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 19 LSLSAXD-VEVAQXRKRHERRPPLEASHANCSS*GNVLLNTSGTSLKKEC 165
LS+S D VE+A R R L +NCS N+L N SL C
Sbjct: 352 LSVSQADQVEIANNRFEDYGRCELNIGSSNCSFRNNILQNPQSGSLNFTC 401
>AF241795-1|AAF64049.1| 587|Drosophila melanogaster E protein
transcript A protein.
Length = 587
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 19 LSLSAXD-VEVAQXRKRHERRPPLEASHANCSS*GNVLLNTSGTSLKKEC 165
LS+S D VE+A R R L +NCS N+L N SL C
Sbjct: 239 LSVSQADQVEIANNRFEDYGRCELNIGSSNCSFRNNILQNPQSGSLNFTC 288
>AF241794-1|AAF64048.1| 698|Drosophila melanogaster E protein
transcript B protein.
Length = 698
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 19 LSLSAXD-VEVAQXRKRHERRPPLEASHANCSS*GNVLLNTSGTSLKKEC 165
LS+S D VE+A R R L +NCS N+L N SL C
Sbjct: 239 LSVSQADQVEIANNRFEDYGRCELNIGSSNCSFRNNILQNPQSGSLNFTC 288
>AE014298-2089|AAF48412.1| 700|Drosophila melanogaster CG32594-PB,
isoform B protein.
Length = 700
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 19 LSLSAXD-VEVAQXRKRHERRPPLEASHANCSS*GNVLLNTSGTSLKKEC 165
LS+S D VE+A R R L +NCS N+L N SL C
Sbjct: 352 LSVSQADQVEIANNRFEDYGRCELNIGSSNCSFRNNILQNPQSGSLNFTC 401
>AE014298-2088|AAF48413.2| 825|Drosophila melanogaster CG32594-PC,
isoform C protein.
Length = 825
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 19 LSLSAXD-VEVAQXRKRHERRPPLEASHANCSS*GNVLLNTSGTSLKKEC 165
LS+S D VE+A R R L +NCS N+L N SL C
Sbjct: 352 LSVSQADQVEIANNRFEDYGRCELNIGSSNCSFRNNILQNPQSGSLNFTC 401
>U46688-1|AAB02195.1| 754|Drosophila melanogaster D-stat protein
short form protein.
Length = 754
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 367 FTVTALHVFVCHNGSNKETGG 305
+ + LHV VC NG N T G
Sbjct: 704 YVKSTLHVHVCRNGENGSTSG 724
>U40070-1|AAC46984.1| 761|Drosophila melanogaster stat protein.
Length = 761
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 367 FTVTALHVFVCHNGSNKETGG 305
+ + LHV VC NG N T G
Sbjct: 711 YVKSTLHVHVCRNGENGSTSG 731
>BT021314-1|AAX33462.1| 761|Drosophila melanogaster RE13194p
protein.
Length = 761
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 367 FTVTALHVFVCHNGSNKETGG 305
+ + LHV VC NG N T G
Sbjct: 711 YVKSTLHVHVCRNGENGSTSG 731
>AY094839-1|AAM11192.1| 466|Drosophila melanogaster LP05693p
protein.
Length = 466
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 367 FTVTALHVFVCHNGSNKETGG 305
+ + LHV VC NG N T G
Sbjct: 416 YVKSTLHVHVCRNGENGSTSG 436
>AE014297-2803|AAX52969.1| 635|Drosophila melanogaster CG4257-PG,
isoform G protein.
Length = 635
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 367 FTVTALHVFVCHNGSNKETGG 305
+ + LHV VC NG N T G
Sbjct: 585 YVKSTLHVHVCRNGENGSTSG 605
>AE014297-2802|AAN14351.2| 628|Drosophila melanogaster CG4257-PB,
isoform B protein.
Length = 628
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 367 FTVTALHVFVCHNGSNKETGG 305
+ + LHV VC NG N T G
Sbjct: 578 YVKSTLHVHVCRNGENGSTSG 598
>AE014297-2801|AAS65180.1| 761|Drosophila melanogaster CG4257-PF,
isoform F protein.
Length = 761
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 367 FTVTALHVFVCHNGSNKETGG 305
+ + LHV VC NG N T G
Sbjct: 711 YVKSTLHVHVCRNGENGSTSG 731
>AE014297-2800|AAF55773.2| 754|Drosophila melanogaster CG4257-PE,
isoform E protein.
Length = 754
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 367 FTVTALHVFVCHNGSNKETGG 305
+ + LHV VC NG N T G
Sbjct: 704 YVKSTLHVHVCRNGENGSTSG 724
>AE014297-2799|AAN14350.2| 754|Drosophila melanogaster CG4257-PC,
isoform C protein.
Length = 754
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 367 FTVTALHVFVCHNGSNKETGG 305
+ + LHV VC NG N T G
Sbjct: 704 YVKSTLHVHVCRNGENGSTSG 724
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,179,325
Number of Sequences: 53049
Number of extensions: 224136
Number of successful extensions: 466
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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