Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11l03
         (603 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69392-1|CAA49189.1|  145|Homo sapiens ribosomal protein L26 pro...   235   1e-61
CR456828-1|CAG33109.1|  145|Homo sapiens RPL26 protein.               235   1e-61
BC071664-1|AAH71664.1|  145|Homo sapiens RPL26 protein protein.       235   1e-61
AB061829-1|BAB79467.1|  145|Homo sapiens ribosomal protein L26 p...   235   1e-61
L07287-1|AAA60279.1|  145|Homo sapiens ribosomal protein L26 pro...   232   6e-61
BC070192-1|AAH70192.1|  145|Homo sapiens ribosomal protein L26-l...   232   8e-61
BC017360-1|AAH17360.1|  145|Homo sapiens ribosomal protein L26-l...   232   8e-61

>X69392-1|CAA49189.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  235 bits (574), Expect = 1e-61
 Identities = 110/146 (75%), Positives = 128/146 (87%)
 Frame = -3

Query: 445 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 266
           MKFN  VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 265 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 86
           HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 85  RRAKGRLAALGKDKGKYTEETATAME 8
           R+AK R   +GK+KGKY EET   M+
Sbjct: 121 RKAKSR--QVGKEKGKYKEETIEKMQ 144


>CR456828-1|CAG33109.1|  145|Homo sapiens RPL26 protein.
          Length = 145

 Score =  235 bits (574), Expect = 1e-61
 Identities = 110/146 (75%), Positives = 128/146 (87%)
 Frame = -3

Query: 445 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 266
           MKFN  VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 265 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 86
           HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 85  RRAKGRLAALGKDKGKYTEETATAME 8
           R+AK R   +GK+KGKY EET   M+
Sbjct: 121 RKAKSR--QVGKEKGKYKEETIEKMQ 144


>BC071664-1|AAH71664.1|  145|Homo sapiens RPL26 protein protein.
          Length = 145

 Score =  235 bits (574), Expect = 1e-61
 Identities = 110/146 (75%), Positives = 128/146 (87%)
 Frame = -3

Query: 445 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 266
           MKFN  VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 265 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 86
           HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 85  RRAKGRLAALGKDKGKYTEETATAME 8
           R+AK R   +GK+KGKY EET   M+
Sbjct: 121 RKAKSR--QVGKEKGKYKEETIEKMQ 144


>AB061829-1|BAB79467.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  235 bits (574), Expect = 1e-61
 Identities = 110/146 (75%), Positives = 128/146 (87%)
 Frame = -3

Query: 445 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 266
           MKFN  VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 265 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 86
           HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 85  RRAKGRLAALGKDKGKYTEETATAME 8
           R+AK R   +GK+KGKY EET   M+
Sbjct: 121 RKAKSR--QVGKEKGKYKEETIEKMQ 144


>L07287-1|AAA60279.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  232 bits (568), Expect = 6e-61
 Identities = 109/146 (74%), Positives = 127/146 (86%)
 Frame = -3

Query: 445 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 266
           MKFN  VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 265 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 86
           HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 85  RRAKGRLAALGKDKGKYTEETATAME 8
           R+AK R   +GK+K KY EET   M+
Sbjct: 121 RKAKSR--QVGKEKSKYKEETIEKMQ 144


>BC070192-1|AAH70192.1|  145|Homo sapiens ribosomal protein L26-like
           1 protein.
          Length = 145

 Score =  232 bits (567), Expect = 8e-61
 Identities = 108/146 (73%), Positives = 127/146 (86%)
 Frame = -3

Query: 445 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 266
           MKFN  VTS R KNRKRHF+APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 265 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 86
           HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 85  RRAKGRLAALGKDKGKYTEETATAME 8
           R+AK R   +GK+KGKY EE    M+
Sbjct: 121 RKAKSR--QVGKEKGKYKEELIEKMQ 144


>BC017360-1|AAH17360.1|  145|Homo sapiens ribosomal protein L26-like
           1 protein.
          Length = 145

 Score =  232 bits (567), Expect = 8e-61
 Identities = 108/146 (73%), Positives = 127/146 (86%)
 Frame = -3

Query: 445 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 266
           MKFN  VTS R KNRKRHF+APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 265 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 86
           HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 85  RRAKGRLAALGKDKGKYTEETATAME 8
           R+AK R   +GK+KGKY EE    M+
Sbjct: 121 RKAKSR--QVGKEKGKYKEELIEKMQ 144


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,012,058
Number of Sequences: 237096
Number of extensions: 1785933
Number of successful extensions: 4822
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4806
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)