Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11k06
(620 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029690-1|ABL75747.1| 145|Drosophila melanogaster IP17407p pro... 31 0.95
BT029644-1|ABL75703.1| 145|Drosophila melanogaster IP17207p pro... 31 0.95
AY226547-1|AAO47373.1| 511|Drosophila melanogaster pickpocket 1... 30 2.2
AE014297-4408|AAF56913.2| 511|Drosophila melanogaster CG18287-P... 30 2.2
BT021312-1|AAX33460.1| 1215|Drosophila melanogaster RE14947p pro... 30 2.9
AE014134-2679|AAN10933.1| 1170|Drosophila melanogaster CG12455-P... 30 2.9
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P... 30 2.9
AE014296-583|AAF47729.2| 1427|Drosophila melanogaster CG14964-PA... 29 3.8
K02623-1|AAA28971.1| 284|Drosophila melanogaster protein ( D.me... 29 6.7
K02622-1|AAA28970.1| 257|Drosophila melanogaster protein ( D.me... 29 6.7
AE013599-3867|AAM68313.1| 670|Drosophila melanogaster CG30164-P... 29 6.7
BT014926-1|AAT47777.1| 742|Drosophila melanogaster AT12465p pro... 28 8.9
BT011397-1|AAR96189.1| 998|Drosophila melanogaster AT24804p pro... 28 8.9
AY119510-1|AAM50164.1| 998|Drosophila melanogaster GH12664p pro... 28 8.9
AY094744-1|AAM11097.1| 790|Drosophila melanogaster GM01751p pro... 28 8.9
AE014297-4541|AAN14216.1| 742|Drosophila melanogaster CG31025-P... 28 8.9
AE014297-4540|AAF57010.4| 998|Drosophila melanogaster CG31025-P... 28 8.9
AE013599-3404|AAF46853.2| 2733|Drosophila melanogaster CG4554-PA... 28 8.9
>BT029690-1|ABL75747.1| 145|Drosophila melanogaster IP17407p
protein.
Length = 145
Score = 31.5 bits (68), Expect = 0.95
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -2
Query: 484 AFASESLAEANEKIIHFANALVTANAGLVQANTMLNEARRETAQLANRMADI 329
AF + A+++++ L+ + L A+T L +A++ L NR+AD+
Sbjct: 79 AFTRSFVLSASKQLVTTDQMLIKSQHSLQSAHTSLQQAQKNAQDLQNRVADV 130
>BT029644-1|ABL75703.1| 145|Drosophila melanogaster IP17207p
protein.
Length = 145
Score = 31.5 bits (68), Expect = 0.95
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -2
Query: 484 AFASESLAEANEKIIHFANALVTANAGLVQANTMLNEARRETAQLANRMADI 329
AF + A+++++ L+ + L A+T L +A++ L NR+AD+
Sbjct: 79 AFTRSFVLSASKQLVTTDQMLIKSQHSLQSAHTSLQQAQKNAQDLQNRVADV 130
>AY226547-1|AAO47373.1| 511|Drosophila melanogaster pickpocket 19
protein.
Length = 511
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 8 CNLTFRHARLHGIDELFSSQVLQQRDL---VVLGFVLVSRQRFFNFVKHVH 151
CN +F H+ +HG+ +F Q L QR L +VLG V+ + + H H
Sbjct: 34 CN-SFAHSNIHGMQHVFGEQHLWQRCLWLAIVLGAVITGFS-LYTVLMHRH 82
>AE014297-4408|AAF56913.2| 511|Drosophila melanogaster CG18287-PA
protein.
Length = 511
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 8 CNLTFRHARLHGIDELFSSQVLQQRDL---VVLGFVLVSRQRFFNFVKHVH 151
CN +F H+ +HG+ +F Q L QR L +VLG V+ + + H H
Sbjct: 34 CN-SFAHSNIHGMQHVFGEQHLWQRCLWLAIVLGAVITGFS-LYTVLMHRH 82
>BT021312-1|AAX33460.1| 1215|Drosophila melanogaster RE14947p
protein.
Length = 1215
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 532 KMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANA 407
KM+ NY I+ + F +S E E I+H NA+V A
Sbjct: 586 KMNPNYNSIDFTEVEHLFEDQSPREPGESILHIRNAMVRHEA 627
>AE014134-2679|AAN10933.1| 1170|Drosophila melanogaster CG12455-PB,
isoform B protein.
Length = 1170
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 532 KMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANA 407
KM+ NY I+ + F +S E E I+H NA+V A
Sbjct: 541 KMNPNYNSIDFTEVEHLFEDQSPREPGESILHIRNAMVRHEA 582
>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
isoform A protein.
Length = 2190
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 532 KMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANA 407
KM+ NY I+ + F +S E E I+H NA+V A
Sbjct: 548 KMNPNYNSIDFTEVEHLFEDQSPREPGESILHIRNAMVRHEA 589
>AE014296-583|AAF47729.2| 1427|Drosophila melanogaster CG14964-PA
protein.
Length = 1427
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = -2
Query: 577 VIPQVLCTGKYAPA-VKMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANAGL 401
++P P+ +KMD G+ ++ A+E EANE+I +N L NA
Sbjct: 1050 IVPPTATVANSNPSTLKMDLAKGIKSFFSRDKRSATEKNTEANEEI---SNPLERTNAAA 1106
Query: 400 VQANTMLNEARRETAQLANR 341
+ A+ + +E +L +
Sbjct: 1107 IAADLEVKRKAKEEEELRRK 1126
>K02623-1|AAA28971.1| 284|Drosophila melanogaster protein (
D.melanogaster tropomyosinisoform 127 gene, exon 3. ).
Length = 284
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = -2
Query: 532 KMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANAGLVQANTMLNEARRETAQ 353
K DT ++ N + +E + + +K + LVTA L +ANT L E +
Sbjct: 21 KADTCENQAKDANSRADKLNEEVRDLEKKFVQVEIDLVTAKEQLEKANTELEEKEKLLTA 80
Query: 352 LANRMADIAQDV 317
+ +A + + V
Sbjct: 81 TESEVATLNRKV 92
>K02622-1|AAA28970.1| 257|Drosophila melanogaster protein (
D.melanogaster genefor tropomyosin isoforms 127 and 129,
exons 1 and 2. ).
Length = 257
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = -2
Query: 532 KMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANAGLVQANTMLNEARRETAQ 353
K DT ++ N + +E + + +K + LVTA L +ANT L E +
Sbjct: 21 KADTCENQAKDANSRADKLNEEVRDLEKKFVQVEIDLVTAKEQLEKANTELEEKEKLLTA 80
Query: 352 LANRMADIAQDV 317
+ +A + + V
Sbjct: 81 TESEVATLNRKV 92
>AE013599-3867|AAM68313.1| 670|Drosophila melanogaster CG30164-PA
protein.
Length = 670
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 232 ARAETHTFLRLTHTRPTNVAVGDC*VWLSRLAQCPPCGWP 351
A HT L L + T +++G+ WLS +CP WP
Sbjct: 179 AEISAHTGLELAYDSLTTLSLGEY-GWLSAPMRCPAKRWP 217
>BT014926-1|AAT47777.1| 742|Drosophila melanogaster AT12465p
protein.
Length = 742
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 256 LRLTHTRPTNVAVGDC*VWLSRLAQCPPCGW-PAAPFRGAP 375
+ +++TR V G+ WL ++A CP CG+ P F+ P
Sbjct: 114 MHISNTRSC-VLCGEDVSWLPKVAACPCCGYKPVPEFKERP 153
>BT011397-1|AAR96189.1| 998|Drosophila melanogaster AT24804p
protein.
Length = 998
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 256 LRLTHTRPTNVAVGDC*VWLSRLAQCPPCGW-PAAPFRGAP 375
+ +++TR V G+ WL ++A CP CG+ P F+ P
Sbjct: 370 MHISNTRSC-VLCGEDVSWLPKVAACPCCGYKPVPEFKERP 409
>AY119510-1|AAM50164.1| 998|Drosophila melanogaster GH12664p
protein.
Length = 998
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 256 LRLTHTRPTNVAVGDC*VWLSRLAQCPPCGW-PAAPFRGAP 375
+ +++TR V G+ WL ++A CP CG+ P F+ P
Sbjct: 370 MHISNTRSC-VLCGEDVSWLPKVAACPCCGYKPVPEFKERP 409
>AY094744-1|AAM11097.1| 790|Drosophila melanogaster GM01751p
protein.
Length = 790
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 238 RAQKRSLNRSIKRLGSSDVVFSSDYV 161
+ RSL+ +KRLG ++ SSDYV
Sbjct: 218 KVDSRSLHDLMKRLGDLSIISSSDYV 243
>AE014297-4541|AAN14216.1| 742|Drosophila melanogaster CG31025-PB,
isoform B protein.
Length = 742
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 256 LRLTHTRPTNVAVGDC*VWLSRLAQCPPCGW-PAAPFRGAP 375
+ +++TR V G+ WL ++A CP CG+ P F+ P
Sbjct: 114 MHISNTRSC-VLCGEDVSWLPKVAACPCCGYKPVPEFKERP 153
>AE014297-4540|AAF57010.4| 998|Drosophila melanogaster CG31025-PA,
isoform A protein.
Length = 998
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 256 LRLTHTRPTNVAVGDC*VWLSRLAQCPPCGW-PAAPFRGAP 375
+ +++TR V G+ WL ++A CP CG+ P F+ P
Sbjct: 370 MHISNTRSC-VLCGEDVSWLPKVAACPCCGYKPVPEFKERP 409
>AE013599-3404|AAF46853.2| 2733|Drosophila melanogaster CG4554-PA
protein.
Length = 2733
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 238 RAQKRSLNRSIKRLGSSDVVFSSDYV 161
+ RSL+ +KRLG ++ SSDYV
Sbjct: 2161 KVDSRSLHDLMKRLGDLSIISSSDYV 2186
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,223,425
Number of Sequences: 53049
Number of extensions: 560439
Number of successful extensions: 1782
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1778
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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