Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11j12
         (230 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023549-1|AAY84949.1|  277|Drosophila melanogaster IP09792p pro...    26   8.1  
AE014134-622|AAN10373.1|  277|Drosophila melanogaster CG31954-PA...    26   8.1  

>BT023549-1|AAY84949.1|  277|Drosophila melanogaster IP09792p
           protein.
          Length = 277

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 199 SPRLDGYVLASSPIPHTDWNEELKLYAQSH 110
           SPRLDG ++    I  TD   ++ L   SH
Sbjct: 44  SPRLDGRIVGGHRINITDAPHQVSLQTSSH 73


>AE014134-622|AAN10373.1|  277|Drosophila melanogaster CG31954-PA
           protein.
          Length = 277

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 199 SPRLDGYVLASSPIPHTDWNEELKLYAQSH 110
           SPRLDG ++    I  TD   ++ L   SH
Sbjct: 44  SPRLDGRIVGGHRINITDAPHQVSLQTSSH 73


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,028,843
Number of Sequences: 53049
Number of extensions: 104714
Number of successful extensions: 356
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 24,988,368
effective HSP length: 56
effective length of database: 22,017,624
effective search space used: 440352480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)