Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11j07
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-2879|AAF48976.1| 724|Drosophila melanogaster CG14219-P... 33 0.55
EF114390-1|ABO27283.1| 567|Drosophila melanogaster CG5892 prote... 32 0.73
EF114389-1|ABO27281.1| 566|Drosophila melanogaster CG5892 prote... 32 0.73
EF114388-1|ABO27279.1| 566|Drosophila melanogaster CG5892 prote... 32 0.73
EF114387-1|ABO27277.1| 566|Drosophila melanogaster CG5892 prote... 32 0.73
EF114386-1|ABO27275.1| 567|Drosophila melanogaster CG5892 prote... 32 0.73
EF114385-1|ABO27273.1| 567|Drosophila melanogaster CG5892 prote... 32 0.73
EF114384-1|ABO27271.1| 567|Drosophila melanogaster CG5892 prote... 32 0.73
EF114382-1|ABO27267.1| 567|Drosophila melanogaster CG5892 prote... 32 0.73
EF114381-1|ABO27265.1| 566|Drosophila melanogaster CG5892 prote... 32 0.73
EF114380-1|ABO27263.1| 567|Drosophila melanogaster CG5892 prote... 32 0.73
EF114379-1|ABO27261.1| 566|Drosophila melanogaster CG5892 prote... 32 0.73
EF114378-1|ABO27259.1| 566|Drosophila melanogaster CG5892 prote... 32 0.73
EF114377-1|ABO27257.1| 567|Drosophila melanogaster CG5892 prote... 32 0.73
EF114376-1|ABO27255.1| 567|Drosophila melanogaster CG5892 prote... 32 0.73
EF114375-1|ABO27253.1| 567|Drosophila melanogaster CG5892 prote... 32 0.73
EF114374-1|ABO27251.1| 566|Drosophila melanogaster CG5892 prote... 32 0.73
EF114373-1|ABO27249.1| 566|Drosophila melanogaster CG5892 prote... 32 0.73
EF114372-1|ABO27247.1| 566|Drosophila melanogaster CG5892 prote... 32 0.73
EF114371-1|ABO27245.1| 566|Drosophila melanogaster CG5892 prote... 32 0.73
EF114370-1|ABO27242.1| 566|Drosophila melanogaster CG5892 prote... 32 0.73
AY119082-1|AAM50942.1| 566|Drosophila melanogaster LP10505p pro... 32 0.73
AY118440-1|AAM48469.1| 499|Drosophila melanogaster RH66493p pro... 32 0.73
AE014297-2962|AAF55871.2| 742|Drosophila melanogaster CG5892-PA... 32 0.73
AE013599-1412|AAF58562.1| 499|Drosophila melanogaster CG13176-P... 32 0.73
EF114383-1|ABO27269.1| 566|Drosophila melanogaster CG5892 prote... 31 1.7
AE014297-3343|AAS65196.1| 709|Drosophila melanogaster CG33337-P... 31 2.2
BT003480-1|AAO39483.1| 853|Drosophila melanogaster RE58242p pro... 30 3.9
AE014298-1852|AAF48232.2| 853|Drosophila melanogaster CG32645-P... 30 3.9
BT030144-1|ABN49283.1| 104|Drosophila melanogaster IP17595p pro... 29 6.8
BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p pro... 29 6.8
AE014298-2878|AAF48975.1| 743|Drosophila melanogaster CG14204-P... 29 6.8
AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC... 29 6.8
AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA... 29 6.8
AF217281-1|AAF27637.1| 1616|Drosophila melanogaster ecdysone-ind... 29 8.9
AE014296-1440|AAF50429.2| 1616|Drosophila melanogaster CG32356-P... 29 8.9
>AE014298-2879|AAF48976.1| 724|Drosophila melanogaster CG14219-PA
protein.
Length = 724
Score = 32.7 bits (71), Expect = 0.55
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Frame = -2
Query: 743 WIMSLSLLVT-------SSALPWLSQWWATAAVHVAWPMALLWPVLAC 621
W+++LSL+ + + LP + + + + +AWP+ L W V AC
Sbjct: 535 WLIALSLIASCLFSIYGQNTLPIVEEAFYVSLTRIAWPLGLCWVVFAC 582
>EF114390-1|ABO27283.1| 567|Drosophila melanogaster CG5892 protein
protein.
Length = 567
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114389-1|ABO27281.1| 566|Drosophila melanogaster CG5892 protein
protein.
Length = 566
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114388-1|ABO27279.1| 566|Drosophila melanogaster CG5892 protein
protein.
Length = 566
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114387-1|ABO27277.1| 566|Drosophila melanogaster CG5892 protein
protein.
Length = 566
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114386-1|ABO27275.1| 567|Drosophila melanogaster CG5892 protein
protein.
Length = 567
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114385-1|ABO27273.1| 567|Drosophila melanogaster CG5892 protein
protein.
Length = 567
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114384-1|ABO27271.1| 567|Drosophila melanogaster CG5892 protein
protein.
Length = 567
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114382-1|ABO27267.1| 567|Drosophila melanogaster CG5892 protein
protein.
Length = 567
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114381-1|ABO27265.1| 566|Drosophila melanogaster CG5892 protein
protein.
Length = 566
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114380-1|ABO27263.1| 567|Drosophila melanogaster CG5892 protein
protein.
Length = 567
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114379-1|ABO27261.1| 566|Drosophila melanogaster CG5892 protein
protein.
Length = 566
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114378-1|ABO27259.1| 566|Drosophila melanogaster CG5892 protein
protein.
Length = 566
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114377-1|ABO27257.1| 567|Drosophila melanogaster CG5892 protein
protein.
Length = 567
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114376-1|ABO27255.1| 567|Drosophila melanogaster CG5892 protein
protein.
Length = 567
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114375-1|ABO27253.1| 567|Drosophila melanogaster CG5892 protein
protein.
Length = 567
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114374-1|ABO27251.1| 566|Drosophila melanogaster CG5892 protein
protein.
Length = 566
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114373-1|ABO27249.1| 566|Drosophila melanogaster CG5892 protein
protein.
Length = 566
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114372-1|ABO27247.1| 566|Drosophila melanogaster CG5892 protein
protein.
Length = 566
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114371-1|ABO27245.1| 566|Drosophila melanogaster CG5892 protein
protein.
Length = 566
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>EF114370-1|ABO27242.1| 566|Drosophila melanogaster CG5892 protein
protein.
Length = 566
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>AY119082-1|AAM50942.1| 566|Drosophila melanogaster LP10505p
protein.
Length = 566
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>AY118440-1|AAM48469.1| 499|Drosophila melanogaster RH66493p
protein.
Length = 499
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 279 LSMVLRSSGDIHDGRLRSASVSPRDTVAHAAQK 377
L +R++G +H GRLRS + +P D V ++ K
Sbjct: 395 LMAAIRNAGGVHGGRLRSPAAAPLDVVDNSRSK 427
>AE014297-2962|AAF55871.2| 742|Drosophila melanogaster CG5892-PA
protein.
Length = 742
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
S LP L++ + + +AWP+ L W V AC Y
Sbjct: 558 SKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 592
>AE013599-1412|AAF58562.1| 499|Drosophila melanogaster CG13176-PA
protein.
Length = 499
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 279 LSMVLRSSGDIHDGRLRSASVSPRDTVAHAAQK 377
L +R++G +H GRLRS + +P D V ++ K
Sbjct: 395 LMAAIRNAGGVHGGRLRSPAAAPLDVVDNSRSK 427
>EF114383-1|ABO27269.1| 566|Drosophila melanogaster CG5892 protein
protein.
Length = 566
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 713 SSALPWLSQWWATAAVHVAWPMALLWPVLACATIY 609
+ LP L++ + + +AWP+ L W V AC Y
Sbjct: 382 TKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGY 416
>AE014297-3343|AAS65196.1| 709|Drosophila melanogaster CG33337-PA
protein.
Length = 709
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 13/58 (22%)
Frame = -2
Query: 743 WIMSLSLLVTS---------SALPWLSQWWATAAVH----VAWPMALLWPVLACATIY 609
WI+ L++L TS S PWL ++ + V WPMA+ W V AC Y
Sbjct: 521 WILCLAMLFTSIFALYPKLESGKPWLMTTLEVSSYYTLTRVGWPMAVGWVVFACMQGY 578
>BT003480-1|AAO39483.1| 853|Drosophila melanogaster RE58242p protein.
Length = 853
Score = 29.9 bits (64), Expect = 3.9
Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 3/129 (2%)
Frame = -2
Query: 746 LWIMSLSLLVTSSALPWLSQWWATA---AVHVAWPMALLWPVLACATIYAAPCXXXXXXX 576
L +++L +LV LSQ+ A A H AW ++L W +AC+T Y
Sbjct: 714 LAMLNLFVLVFGLYKADLSQFTAAAYSSLSHSAWALSLAWITIACSTGYGGYINSLLSAP 773
Query: 575 XXXXXXXLCPSXXXXXXXXXXXXXXXADSSVSSNATCVWTYFTAVSVLSMCASLVVSLLV 396
+ +D+ + + F ++V S S VVS+
Sbjct: 774 CLYPFSRVTYCAYLVHPIVIRSMALNSDAPLHLGGDLMVVMFFGLTVASYFLSFVVSMSF 833
Query: 395 EMPFCSLLR 369
E P ++L+
Sbjct: 834 EAPVITMLK 842
>AE014298-1852|AAF48232.2| 853|Drosophila melanogaster CG32645-PB
protein.
Length = 853
Score = 29.9 bits (64), Expect = 3.9
Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 3/129 (2%)
Frame = -2
Query: 746 LWIMSLSLLVTSSALPWLSQWWATA---AVHVAWPMALLWPVLACATIYAAPCXXXXXXX 576
L +++L +LV LSQ+ A A H AW ++L W +AC+T Y
Sbjct: 714 LAMLNLFVLVFGLYKADLSQFTAAAYSSLSHSAWALSLAWITIACSTGYGGYINSLLSAP 773
Query: 575 XXXXXXXLCPSXXXXXXXXXXXXXXXADSSVSSNATCVWTYFTAVSVLSMCASLVVSLLV 396
+ +D+ + + F ++V S S VVS+
Sbjct: 774 CLYPFSRVTYCAYLVHPIVIRSMALNSDAPLHLGGDLMVVMFFGLTVASYFLSFVVSMSF 833
Query: 395 EMPFCSLLR 369
E P ++L+
Sbjct: 834 EAPVVTMLK 842
>BT030144-1|ABN49283.1| 104|Drosophila melanogaster IP17595p
protein.
Length = 104
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3
Query: 385 SAVFCAACATVSRGDTDADRSLPSWMSPLERSTI 284
SA C AC+ S T A S+PS ++PL R T+
Sbjct: 6 SAACCWACSWPSAPPTMAKTSMPSPIAPLSRITL 39
>BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p protein.
Length = 1664
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 522 RGVHDQRARAQPADCRRVRTAQHAATWRCIYSGACKYRPQ*GHGPGHVHRCGR--PP 686
R V + + + A+C +R AQ W Y C Y Q H PGH CG+ PP
Sbjct: 1388 RAVEEAKRKQWCANC--MREAQLYCCWNTSY---CDYPCQQLHWPGHSATCGQSVPP 1439
>AE014298-2878|AAF48975.1| 743|Drosophila melanogaster CG14204-PA
protein.
Length = 743
Score = 29.1 bits (62), Expect = 6.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 668 VHVAWPMALLWPVLACATIYAA 603
V +AWP+ L W V AC Y +
Sbjct: 576 VRIAWPLGLCWVVFACMQGYGS 597
>AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC,
isoform C protein.
Length = 1664
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 522 RGVHDQRARAQPADCRRVRTAQHAATWRCIYSGACKYRPQ*GHGPGHVHRCGR--PP 686
R V + + + A+C +R AQ W Y C Y Q H PGH CG+ PP
Sbjct: 1388 RAVEEAKRKQWCANC--MREAQLYCCWNTSY---CDYPCQQLHWPGHSATCGQSVPP 1439
>AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA,
isoform A protein.
Length = 1674
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 522 RGVHDQRARAQPADCRRVRTAQHAATWRCIYSGACKYRPQ*GHGPGHVHRCGR--PP 686
R V + + + A+C +R AQ W Y C Y Q H PGH CG+ PP
Sbjct: 1398 RAVEEAKRKQWCANC--MREAQLYCCWNTSY---CDYPCQQLHWPGHSATCGQSVPP 1449
>AF217281-1|AAF27637.1| 1616|Drosophila melanogaster
ecdysone-inducible gene E1 protein.
Length = 1616
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 519 RRGVHDQRARAQPADCRRVRTAQHAATWRCIYSGAC 626
RRGV D A + + C RT T++C SG C
Sbjct: 1382 RRGVCDCAAGEEGSQCSAERTGCSPGTFQCRSSGVC 1417
>AE014296-1440|AAF50429.2| 1616|Drosophila melanogaster CG32356-PA,
isoform A protein.
Length = 1616
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 519 RRGVHDQRARAQPADCRRVRTAQHAATWRCIYSGAC 626
RRGV D A + + C RT T++C SG C
Sbjct: 1382 RRGVCDCAAGEEGSQCSAERTGCSPGTFQCRSSGVC 1417
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,480,499
Number of Sequences: 53049
Number of extensions: 552668
Number of successful extensions: 1755
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1753
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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