Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11j06
(848 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024459-1|ABC86521.1| 882|Drosophila melanogaster AT20596p pro... 215 6e-56
BT003798-1|AAO41481.1| 927|Drosophila melanogaster AT25231p pro... 215 6e-56
AE014296-640|AAF47760.1| 882|Drosophila melanogaster CG11526-PA... 215 6e-56
AE014296-639|AAN11560.2| 927|Drosophila melanogaster CG11526-PB... 215 6e-56
BT010077-1|AAQ22546.1| 924|Drosophila melanogaster LD09801p pro... 31 1.5
AE013599-1997|AAM68542.1| 924|Drosophila melanogaster CG12424-P... 31 1.5
AE013599-1996|AAM68541.1| 924|Drosophila melanogaster CG12424-P... 31 1.5
AE013599-1995|AAF58176.1| 924|Drosophila melanogaster CG12424-P... 31 1.5
AY070604-1|AAL48075.1| 392|Drosophila melanogaster RE70771p pro... 29 6.1
>BT024459-1|ABC86521.1| 882|Drosophila melanogaster AT20596p protein.
Length = 882
Score = 215 bits (525), Expect = 6e-56
Identities = 96/119 (80%), Positives = 110/119 (92%)
Frame = -1
Query: 785 LLRILNKLTKWKNARIMMLVVFKSAPILKRTLKVRHALMQFYVLKLLKMQTKYLGRQWRK 606
LLRILNKL KWK++R+MMLVVFKSAPILK+TLKVRHA+MQ YVLKLLKMQTKYLGRQWRK
Sbjct: 651 LLRILNKLIKWKHSRVMMLVVFKSAPILKKTLKVRHAMMQLYVLKLLKMQTKYLGRQWRK 710
Query: 605 TNMKTISAIYSKVRHRLNDDWAFGNDVDARPWDFQSEECALRISVDRFNHRRYGTGTEQ 429
+NMKT+SAIY+KVRHRLNDDWAFGND+++RPWDFQ+EEC LR VDRFN RRY T++
Sbjct: 711 SNMKTMSAIYAKVRHRLNDDWAFGNDLESRPWDFQAEECTLRACVDRFNLRRYPEATQK 769
Score = 45.6 bits (103), Expect = 9e-05
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -1
Query: 383 ESNIELDEEFKENYELWLEQEVYNNEINWDVL 288
+ +EL + FK NY +WLE+EVYN++ +WD L
Sbjct: 851 DRKVELTDYFKANYAVWLEEEVYNSQTDWDAL 882
Score = 31.1 bits (67), Expect = 2.0
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 831 SSVPYSWRNVFSCIN 787
S YSWRNVFSCIN
Sbjct: 636 SDKSYSWRNVFSCIN 650
>BT003798-1|AAO41481.1| 927|Drosophila melanogaster AT25231p protein.
Length = 927
Score = 215 bits (525), Expect = 6e-56
Identities = 96/119 (80%), Positives = 110/119 (92%)
Frame = -1
Query: 785 LLRILNKLTKWKNARIMMLVVFKSAPILKRTLKVRHALMQFYVLKLLKMQTKYLGRQWRK 606
LLRILNKL KWK++R+MMLVVFKSAPILK+TLKVRHA+MQ YVLKLLKMQTKYLGRQWRK
Sbjct: 696 LLRILNKLIKWKHSRVMMLVVFKSAPILKKTLKVRHAMMQLYVLKLLKMQTKYLGRQWRK 755
Query: 605 TNMKTISAIYSKVRHRLNDDWAFGNDVDARPWDFQSEECALRISVDRFNHRRYGTGTEQ 429
+NMKT+SAIY+KVRHRLNDDWAFGND+++RPWDFQ+EEC LR VDRFN RRY T++
Sbjct: 756 SNMKTMSAIYAKVRHRLNDDWAFGNDLESRPWDFQAEECTLRACVDRFNLRRYPEATQK 814
Score = 45.6 bits (103), Expect = 9e-05
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -1
Query: 383 ESNIELDEEFKENYELWLEQEVYNNEINWDVL 288
+ +EL + FK NY +WLE+EVYN++ +WD L
Sbjct: 896 DRKVELTDYFKANYAVWLEEEVYNSQTDWDAL 927
Score = 31.1 bits (67), Expect = 2.0
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 831 SSVPYSWRNVFSCIN 787
S YSWRNVFSCIN
Sbjct: 681 SDKSYSWRNVFSCIN 695
>AE014296-640|AAF47760.1| 882|Drosophila melanogaster CG11526-PA,
isoform A protein.
Length = 882
Score = 215 bits (525), Expect = 6e-56
Identities = 96/119 (80%), Positives = 110/119 (92%)
Frame = -1
Query: 785 LLRILNKLTKWKNARIMMLVVFKSAPILKRTLKVRHALMQFYVLKLLKMQTKYLGRQWRK 606
LLRILNKL KWK++R+MMLVVFKSAPILK+TLKVRHA+MQ YVLKLLKMQTKYLGRQWRK
Sbjct: 651 LLRILNKLIKWKHSRVMMLVVFKSAPILKKTLKVRHAMMQLYVLKLLKMQTKYLGRQWRK 710
Query: 605 TNMKTISAIYSKVRHRLNDDWAFGNDVDARPWDFQSEECALRISVDRFNHRRYGTGTEQ 429
+NMKT+SAIY+KVRHRLNDDWAFGND+++RPWDFQ+EEC LR VDRFN RRY T++
Sbjct: 711 SNMKTMSAIYAKVRHRLNDDWAFGNDLESRPWDFQAEECTLRACVDRFNLRRYPEATQK 769
Score = 45.6 bits (103), Expect = 9e-05
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -1
Query: 383 ESNIELDEEFKENYELWLEQEVYNNEINWDVL 288
+ +EL + FK NY +WLE+EVYN++ +WD L
Sbjct: 851 DRKVELTDYFKANYAVWLEEEVYNSQTDWDAL 882
Score = 31.1 bits (67), Expect = 2.0
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 831 SSVPYSWRNVFSCIN 787
S YSWRNVFSCIN
Sbjct: 636 SDKSYSWRNVFSCIN 650
>AE014296-639|AAN11560.2| 927|Drosophila melanogaster CG11526-PB,
isoform B protein.
Length = 927
Score = 215 bits (525), Expect = 6e-56
Identities = 96/119 (80%), Positives = 110/119 (92%)
Frame = -1
Query: 785 LLRILNKLTKWKNARIMMLVVFKSAPILKRTLKVRHALMQFYVLKLLKMQTKYLGRQWRK 606
LLRILNKL KWK++R+MMLVVFKSAPILK+TLKVRHA+MQ YVLKLLKMQTKYLGRQWRK
Sbjct: 696 LLRILNKLIKWKHSRVMMLVVFKSAPILKKTLKVRHAMMQLYVLKLLKMQTKYLGRQWRK 755
Query: 605 TNMKTISAIYSKVRHRLNDDWAFGNDVDARPWDFQSEECALRISVDRFNHRRYGTGTEQ 429
+NMKT+SAIY+KVRHRLNDDWAFGND+++RPWDFQ+EEC LR VDRFN RRY T++
Sbjct: 756 SNMKTMSAIYAKVRHRLNDDWAFGNDLESRPWDFQAEECTLRACVDRFNLRRYPEATQK 814
Score = 45.6 bits (103), Expect = 9e-05
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -1
Query: 383 ESNIELDEEFKENYELWLEQEVYNNEINWDVL 288
+ +EL + FK NY +WLE+EVYN++ +WD L
Sbjct: 896 DRKVELTDYFKANYAVWLEEEVYNSQTDWDAL 927
Score = 31.1 bits (67), Expect = 2.0
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 831 SSVPYSWRNVFSCIN 787
S YSWRNVFSCIN
Sbjct: 681 SDKSYSWRNVFSCIN 695
>BT010077-1|AAQ22546.1| 924|Drosophila melanogaster LD09801p
protein.
Length = 924
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 494 LH-FESPRVLHLHHFQMPNHH 553
LH ++ P+ LH HH Q PNHH
Sbjct: 30 LHLYQQPQQLHHHHHQHPNHH 50
>AE013599-1997|AAM68542.1| 924|Drosophila melanogaster CG12424-PC,
isoform C protein.
Length = 924
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 494 LH-FESPRVLHLHHFQMPNHH 553
LH ++ P+ LH HH Q PNHH
Sbjct: 30 LHLYQQPQQLHHHHHQHPNHH 50
>AE013599-1996|AAM68541.1| 924|Drosophila melanogaster CG12424-PB,
isoform B protein.
Length = 924
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 494 LH-FESPRVLHLHHFQMPNHH 553
LH ++ P+ LH HH Q PNHH
Sbjct: 30 LHLYQQPQQLHHHHHQHPNHH 50
>AE013599-1995|AAF58176.1| 924|Drosophila melanogaster CG12424-PA,
isoform A protein.
Length = 924
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 494 LH-FESPRVLHLHHFQMPNHH 553
LH ++ P+ LH HH Q PNHH
Sbjct: 30 LHLYQQPQQLHHHHHQHPNHH 50
>AY070604-1|AAL48075.1| 392|Drosophila melanogaster RE70771p
protein.
Length = 392
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -3
Query: 666 VLCTEITKNANKIFRKTVAKNQHENNKRNIF 574
+L +ITK N+I R+TV + EN +RN F
Sbjct: 236 ILHPDITKFFNRIVRETVELRERENIRRNDF 266
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,353,798
Number of Sequences: 53049
Number of extensions: 678058
Number of successful extensions: 1855
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1855
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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