Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11j02
(819 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 27 0.16
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 27 0.21
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 27 0.21
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 27 0.21
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 27 0.21
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 27 0.21
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 27 0.21
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 27 0.21
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 27 0.21
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 27 0.21
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 27 0.21
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 27 0.21
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 26 0.48
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 25 0.84
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 25 0.84
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 25 0.84
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 25 1.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 25 1.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 25 1.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 25 1.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 25 1.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 25 1.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 25 1.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 24 1.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 1.9
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 24 1.9
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 1.9
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 2.6
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 3.4
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 3.4
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 3.4
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 3.4
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 3.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 4.5
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 5.9
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 5.9
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 22 5.9
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 5.9
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 27.5 bits (58), Expect = 0.16
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 491 KYSSVANLLFNNYKY--HDNIASNNNAENLKKV 399
K + + L NNY Y ++N +NNN N KK+
Sbjct: 77 KEPKIVSSLSNNYNYSNYNNYNNNNNYNNYKKL 109
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 27.1 bits (57), Expect = 0.21
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 515 NKKSTLTYKYSSVANLLFNNYKYHD-NIASNNNAENLKKVKKEDGSMHIVEQ 363
++K K + + L NNYKY + N +NNN N K + +++ +EQ
Sbjct: 69 DRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQ 120
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 27.1 bits (57), Expect = 0.21
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 515 NKKSTLTYKYSSVANLLFNNYKYHD-NIASNNNAENLKKVKKEDGSMHIVEQ 363
++K K + + L NNYKY + N +NNN N K + +++ +EQ
Sbjct: 69 DRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQ 120
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 27.1 bits (57), Expect = 0.21
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 515 NKKSTLTYKYSSVANLLFNNYKYHD-NIASNNNAENLKKVKKEDGSMHIVEQ 363
++K K + + L NNYKY + N +NNN N K + +++ +EQ
Sbjct: 69 DRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQ 120
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 27.1 bits (57), Expect = 0.21
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 515 NKKSTLTYKYSSVANLLFNNYKYHD-NIASNNNAENLKKVKKEDGSMHIVEQ 363
++K K + + L NNYKY + N +NNN N K + +++ +EQ
Sbjct: 69 DRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQ 120
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 27.1 bits (57), Expect = 0.21
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 491 KYSSVANLLFNNYKY--HDNIASNNNAENLKKV 399
K + + L NNY Y ++N +NNN N KK+
Sbjct: 77 KEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKL 109
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 27.1 bits (57), Expect = 0.21
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 491 KYSSVANLLFNNYKY--HDNIASNNNAENLKKV 399
K + + L NNY Y ++N +NNN N KK+
Sbjct: 77 KEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKL 109
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 27.1 bits (57), Expect = 0.21
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 491 KYSSVANLLFNNYKY--HDNIASNNNAENLKKV 399
K + + L NNY Y ++N +NNN N KK+
Sbjct: 77 KEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKL 109
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 27.1 bits (57), Expect = 0.21
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 491 KYSSVANLLFNNYKY--HDNIASNNNAENLKKV 399
K + + L NNY Y ++N +NNN N KK+
Sbjct: 77 KEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKL 109
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 27.1 bits (57), Expect = 0.21
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 491 KYSSVANLLFNNYKY--HDNIASNNNAENLKKV 399
K + + L NNY Y ++N +NNN N KK+
Sbjct: 77 KEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKL 109
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 27.1 bits (57), Expect = 0.21
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 491 KYSSVANLLFNNYKY--HDNIASNNNAENLKKV 399
K + + L NNY Y ++N +NNN N KK+
Sbjct: 77 KEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKL 109
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 27.1 bits (57), Expect = 0.21
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 491 KYSSVANLLFNNYKY--HDNIASNNNAENLKKV 399
K + + L NNY Y ++N +NNN N KK+
Sbjct: 77 KEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKL 109
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.48
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 491 KYSSVANLLFNNYKYHDNIASNNNAENLKKVKKEDGSMHIVEQ 363
K S N L NNY Y++N + NN N K + ++ +EQ
Sbjct: 80 KIISNNNSLSNNYNYNNNYNNYNNNYNTNYKKLQYYNIINIEQ 122
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.0 bits (52), Expect = 0.84
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 497 TYKYSSVANLLFNNYKYHDNIASNNNAEN 411
T K + + L NNYKY + NNN N
Sbjct: 75 TSKEPKIISSLSNNYKYSNYNNYNNNYNN 103
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.0 bits (52), Expect = 0.84
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 497 TYKYSSVANLLFNNYKYHDNIASNNNAEN 411
T K + + L NNYKY + NNN N
Sbjct: 75 TSKEPKIISSLSNNYKYSNYNNYNNNYNN 103
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 25.0 bits (52), Expect = 0.84
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -2
Query: 683 TLPIMLSRKESNEIETASNNFFVSPYVSQILKYSESVKFPDNPPNKYVVDNLNLIVNKKS 504
TLP + RK N F V+ LK + +F DN ++ N + + K+
Sbjct: 72 TLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVTRLYEFSDNELLVHISTNKS---DVKA 128
Query: 503 TLTYK 489
T YK
Sbjct: 129 TRVYK 133
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 491 KYSSVANLLFNNYKYHD-NIASNNNAENLKKVK 396
K + + L NNYKY + N +NN N KK++
Sbjct: 77 KEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQ 109
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 491 KYSSVANLLFNNYKYHD-NIASNNNAENLKKVK 396
K + + L NNYKY + N +NN N KK++
Sbjct: 77 KEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQ 109
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 491 KYSSVANLLFNNYKYHD-NIASNNNAENLKKVK 396
K + + L NNYKY + N +NN N KK++
Sbjct: 77 KEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQ 109
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 491 KYSSVANLLFNNYKYHD-NIASNNNAENLKKVK 396
K + + L NNYKY + N +NN N KK++
Sbjct: 77 KEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQ 109
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 491 KYSSVANLLFNNYKYHD-NIASNNNAENLKKVK 396
K + + L NNYKY + N +NN N KK++
Sbjct: 77 KEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQ 109
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 491 KYSSVANLLFNNYKYHD-NIASNNNAENLKKVK 396
K + + L NNYKY + N +NN N KK++
Sbjct: 77 KEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQ 109
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 491 KYSSVANLLFNNYKYHD-NIASNNNAENLKKVK 396
K + + L NNYKY + N +NN N KK++
Sbjct: 77 KEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQ 109
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 24.2 bits (50), Expect = 1.5
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -2
Query: 563 DNPPNKYVVDNLNLIVNKKSTLTYKYSSVANLLFNNYKYHD----NIASNNNAENLKK 402
+N KY + ++K K + + L NNYKY + N +NNN N K
Sbjct: 286 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNYNNNNYNNYNK 343
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 521 IVNKKSTLTYKYSSVANLLFNNYKYHDNIASNNNAENLKKV 399
I++ S T ++ +NN Y++N +NN N KK+
Sbjct: 314 IISSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNNCKKL 354
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 461 NNYKYHDNIASNNNAENLKKV 399
NNY + N +NNN N KK+
Sbjct: 332 NNYNNNYNNYNNNNYNNYKKL 352
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 491 KYSSVANLLFNNYKYHDNIASNNNAEN 411
K + + L NNYKY + NNN N
Sbjct: 310 KEPKIISSLSNNYKYSNYNNYNNNYNN 336
Score = 22.2 bits (45), Expect = 5.9
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 659 KESNEIETASNNFFVSPYVSQILKYSESVKFPDNPPNKY--VVDNLNLI 519
KE I + SNN+ S Y + Y+ + +N N Y + N+N I
Sbjct: 310 KEPKIISSLSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNINYI 358
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 1.9
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -2
Query: 641 ETASNNFFVSPYVSQILKYSESVKFPDNPPNKYVVDN 531
E++S++F Y S + K SES PD P +Y++++
Sbjct: 952 ESSSSSF----YSSFLYKSSESSCNPDQKPTEYLLED 984
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 464 FNNYKYHDNIASNNNAENLKKV 399
+NN Y++ +NNN N KK+
Sbjct: 96 YNNNNYNNYNYNNNNYNNYKKL 117
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 3.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 461 NNYKYHDNIASNNNAENLKK 402
NNYKY+ N N N N K
Sbjct: 94 NNYKYNYNNKYNYNNNNYNK 113
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.0 bits (47), Expect = 3.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 461 NNYKYHDNIASNNNAENLKKV 399
NNYKY+ N +NN N KK+
Sbjct: 94 NNYKYNYN--NNNYNNNCKKL 112
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 3.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 461 NNYKYHDNIASNNNAENLKKV 399
NNYKY+ N +NN N KK+
Sbjct: 94 NNYKYNYN--NNNYNNNCKKL 112
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 3.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 461 NNYKYHDNIASNNNAENLKKV 399
NNYKY+ N +NN N KK+
Sbjct: 94 NNYKYNYN--NNNYNNNCKKL 112
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 3.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 461 NNYKYHDNIASNNNAENLKKV 399
NNYKY+ N +NN N KK+
Sbjct: 94 NNYKYNYN--NNNYNNNCKKL 112
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 4.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 479 VANLLFNNYKYHDNIASNNNAENLKK 402
+ + L NNY Y + NNN N K
Sbjct: 81 IISSLSNNYNYSNYNNYNNNYNNYNK 106
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 461 NNYKYHDNIASNNNAENLKKV 399
NNYKY+ N + NN KK+
Sbjct: 92 NNYKYNYNNNNYNNNNYNKKL 112
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 461 NNYKYHDNIASNNNAENLKKV 399
NNYKY+ N + NN KK+
Sbjct: 92 NNYKYNYNNNNYNNNNYNKKL 112
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 22.2 bits (45), Expect = 5.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 276 LSYSQPLFVFERQYYKIVTFYIIHILS 356
+S+ PLFV YYKI +I S
Sbjct: 213 ISFYLPLFVMVFTYYKIYRAAVIQTKS 239
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 22.2 bits (45), Expect = 5.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 632 SNNFFVSPYVSQILKYSESVKFPDNPPNKYVVDNLNLIVNKKSTLTYKYS 483
SN F + + ++ + E F + + VDN + + LTYKYS
Sbjct: 274 SNAFRGNNNLKWLVNWGEQWGFLPSKDSLVFVDNHDTQRDNPQILTYKYS 323
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,230
Number of Sequences: 438
Number of extensions: 4207
Number of successful extensions: 52
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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