Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11i24
(878 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 298 4e-81
10_08_0620 - 19321612-19323237 296 2e-80
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 124 7e-29
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 102 4e-22
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 100 3e-21
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 99 5e-21
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 72 7e-13
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 58 9e-09
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 52 6e-07
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 43 3e-04
02_04_0615 - 24410124-24410290,24410592-24410623,24410717-244108... 40 0.003
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592... 38 0.008
06_01_1053 - 8328902-8329156,8330538-8330804,8330895-8332343,833... 37 0.024
08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-24... 32 0.70
09_04_0527 - 18337968-18338077,18338440-18341212 31 1.6
01_06_0768 - 31829753-31829851,31830454-31830593,31830729-318308... 31 1.6
12_02_0335 - 17669232-17670063,17670619-17672150 30 2.8
06_03_0924 - 25976629-25976979,25977471-25978424,25978512-259785... 30 2.8
03_06_0313 + 33073542-33074464,33074901-33075069 29 3.7
10_08_0731 + 20161962-20163628,20163721-20163862,20164181-201644... 28 8.6
10_07_0150 - 13422497-13422575,13423360-13423433,13423948-134241... 28 8.6
01_01_0967 - 7604362-7604589,7604866-7605012,7605351-7605545 28 8.6
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 298 bits (731), Expect = 4e-81
Identities = 139/271 (51%), Positives = 209/271 (77%), Gaps = 1/271 (0%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAA 665
VVV+AG+LL A+ LL G HPT +D + A++V+ M+ P++L++ D+L+K+A+
Sbjct: 103 VVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAVEVLHAMAIPIELSDRDSLVKSAS 162
Query: 664 TSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELIQ 485
T+LNSKVVSQ+S++L+P+AV A +V++P + +DLRD++V++++GGTV+D ELI+
Sbjct: 163 TALNSKVVSQYSSLLSPLAVDAALSVVDPAHPDL---LDLRDIRVVKKLGGTVDDTELIR 219
Query: 484 GLVIPHRAANV-NGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQYI 308
GL+ +A++ GP R+E AK+ +IQF +SPPKTD++ +VIVSDYA MDR+L+EER YI
Sbjct: 220 GLIFDKKASHAAGGPTRVENAKIAVIQFQVSPPKTDIEQSVIVSDYAQMDRILREERNYI 279
Query: 307 LNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGCR 128
L +VK+IK +GCNVLL+QKSILRDA++DL++H+L K K +V+KD+ER++IEF+ KTL C
Sbjct: 280 LGMVKKIKASGCNVLLIQKSILRDAVTDLSLHYLAKAKILVVKDVERDEIEFITKTLNCL 339
Query: 127 PIASLDHFTAENLVNVDLVEEINEXWWKIYK 35
PIA+++HF + L DLVEE++ KI K
Sbjct: 340 PIANIEHFREDKLGYADLVEEVSVGESKIVK 370
>10_08_0620 - 19321612-19323237
Length = 541
Score = 296 bits (726), Expect = 2e-80
Identities = 141/263 (53%), Positives = 205/263 (77%), Gaps = 1/263 (0%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAA 665
VVV+AG+LL A+ LL G HPT +D A++V+ M+ PV+L++ DAL+K+A+
Sbjct: 107 VVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAVEVLHGMAIPVELSDRDALVKSAS 166
Query: 664 TSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELIQ 485
T+LNSKVVSQ+ST+L+P+AV A AV++P + +DLRD++V++++G TV+D ELI+
Sbjct: 167 TALNSKVVSQYSTLLSPLAVDAALAVVDPAHPYL---LDLRDIRVVKKLGCTVDDTELIR 223
Query: 484 GLVIPHRAANV-NGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQYI 308
GLV+ +A++V GP RI AK+ +IQF +SPPKTD++H+V+VSDYA MDR+L+EER YI
Sbjct: 224 GLVLNKKASHVAGGPTRIGDAKIAVIQFQVSPPKTDIEHSVVVSDYAQMDRILREERNYI 283
Query: 307 LNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGCR 128
L +VK+IK +GCNVLL+QKSILRD+++DL++H+L K K MV+KD+ER++IEF+ KTL C
Sbjct: 284 LGMVKKIKASGCNVLLIQKSILRDSVTDLSLHYLAKAKIMVVKDVERDEIEFITKTLNCM 343
Query: 127 PIASLDHFTAENLVNVDLVEEIN 59
PIAS++H + L + LVEEI+
Sbjct: 344 PIASIEHLREDKLGHAHLVEEIS 366
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 124 bits (300), Expect = 7e-29
Identities = 76/262 (29%), Positives = 139/262 (53%), Gaps = 2/262 (0%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLN--NEDALLKA 671
VVV+AG+LL+ AEKLL++GIHP I++G++ A ++A +E++S + + N + L++
Sbjct: 105 VVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDHLEHISHKFEFSATNIEPLVQT 164
Query: 670 AATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAEL 491
T+L+SK+V++ LA IAV+A+ AV + + +DL +KV ++GG +ED EL
Sbjct: 165 CMTTLSSKIVNRCKRTLAEIAVKAVLAVAD--LERKDVNLDL--IKVEGKVGGKLEDTEL 220
Query: 490 IQGLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQY 311
+ G+++ ++ P RIE AK+ ++ PPK H V + + ++E++Y
Sbjct: 221 VYGIIVDKDMSHPQMPKRIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQMLREQEQKY 280
Query: 310 ILNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGC 131
+V++ K G +++ Q D A H L ++ + ++E + G
Sbjct: 281 FDEMVQKCKDVGATLVICQW-----GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGG 335
Query: 130 RPIASLDHFTAENLVNVDLVEE 65
R + + E L +V E
Sbjct: 336 RIVPRFQELSPEKLGKAGIVRE 357
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 102 bits (244), Expect = 4e-22
Identities = 66/239 (27%), Positives = 122/239 (51%), Gaps = 2/239 (0%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAA 665
V+V+AG +L A+ + K HPTVI + KAL AL V++ ++ PVD+++ A+L
Sbjct: 98 VIVLAGEMLHVAQAFIDKNYHPTVICRAYTKALDDALSVLDKIAIPVDVDDRVAMLGLVK 157
Query: 664 TSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERI-GGTVEDAELI 488
+S+ +K Q ++A +A+ A + G+ VD++ +E++ GG +ED++++
Sbjct: 158 SSIGTKFTGQFGDLIADLAIDATTTAGVDLGQGI-REVDIKKYIKVEKVPGGQLEDSKVL 216
Query: 487 QGLVIPHRAANVNGPHR-IEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQY 311
+G++I R I ++ L+ + K + N + +L+ E +Y
Sbjct: 217 KGVMINKDVVAPGKMRRKIVNPRIILLDCPLEYKKGENQTNAELMKEEDWQVMLQMEEEY 276
Query: 310 ILNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLG 134
I N+ QI K ++++ +K LSDLAVH+L K I+ + + D + K G
Sbjct: 277 IENLCAQILKFKPDLVITEK-----GLSDLAVHYLGKAGVSAIRRLRKTDNNRIAKACG 330
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 99.5 bits (237), Expect = 3e-21
Identities = 65/239 (27%), Positives = 120/239 (50%), Gaps = 2/239 (0%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAA 665
V+V+AG +L AE + K HPTVI + KAL+ AL V++ ++ VD+N+ A+L
Sbjct: 98 VIVLAGEMLHVAEAFIDKHYHPTVICRAYTKALEDALAVLDKIAMHVDVNDRAAMLGLVK 157
Query: 664 TSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERI-GGTVEDAELI 488
+S+ +K Q ++A +A+ A + G+ VD++ +E++ GG +ED+ ++
Sbjct: 158 SSIGTKFTGQFGDLIADLAIDATTTAGVDLGQGM-REVDIKKYIKVEKVPGGQLEDSRVL 216
Query: 487 QGLVIPHRAANVNGPHR-IEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQY 311
+G++ R I ++ L+ + K + N + +L+ E +Y
Sbjct: 217 KGVMFNKDVVAPGKMRRKIVNPRIILLDCPVEYKKGENQTNAELMKEEDWQVLLEMEEEY 276
Query: 310 ILNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLG 134
I N+ QI K ++++ +K LSDLA+H+L K I+ + + D + K G
Sbjct: 277 IKNLCAQILKFKPDLVVTEK-----GLSDLAIHYLSKAGVSAIRRLRKTDNNRIAKACG 330
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 98.7 bits (235), Expect = 5e-21
Identities = 66/266 (24%), Positives = 135/266 (50%), Gaps = 6/266 (2%)
Frame = -2
Query: 841 VVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENM----STPVDLNNEDALLK 674
+ AG LL+ AE+L++ G+HP+ I G+ KA+ ++++E++ S +D+ N++ ++
Sbjct: 100 ISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTVEILEDLVEKGSENMDVRNKEEVVL 159
Query: 673 AAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAE 494
+++ SK Q IL P+ A V A ++ +V+V + +GG + ++
Sbjct: 160 LMRSAVASKQFGQED-ILCPLVADACMQVCPKNP----ANFNVDNVRVAKLLGGGLHNSS 214
Query: 493 LIQGLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQ 314
+++G+V+ + A V R+EKAK+ + + T+ V++ ++ K E
Sbjct: 215 VVRGMVLKNDA--VGSIKRVEKAKIAVFAGGVDTSATETKGTVLIHSAEQLENYAKTEEA 272
Query: 313 YILNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLG 134
+ ++K + +G V+ + A+ D+A+HF ++ K MV++ + ++ C+T G
Sbjct: 273 KVEELIKAVADSGAKVI-----VSGAAVGDMALHFCERYKLMVLRISSKFELRRFCRTTG 327
Query: 133 CRPIASLDHFTAENLVNVD--LVEEI 62
+ L A+ L D VEEI
Sbjct: 328 SIALLKLSRPNADELGYADSVSVEEI 353
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 71.7 bits (168), Expect = 7e-13
Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 4/265 (1%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVV--ENMSTPVDLNN-EDALLK 674
VVV+AG LL AEKL+ IHP I G++ A++ A + M +++ L+
Sbjct: 95 VVVLAGELLREAEKLVNMKIHPMTIIAGYRMAVECARNALLERTMDNKENIDKFRSDLMN 154
Query: 673 AAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAE 494
A T+L+SK++SQ A +AV A+ + +L +++++ GG+++D+
Sbjct: 155 IAMTTLSSKILSQDKEYFAELAVDAVLRLK--------GSTNLEAIQILKIPGGSLKDSF 206
Query: 493 LIQGLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDM-DHNVIVSDYAAMDRVLKEER 317
L +G ++ + + P RIE AK+ + + K + V V A + + E+
Sbjct: 207 LDEGFIL-DKKIGLGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVAEIEAAEK 265
Query: 316 QYILNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTL 137
Q + V++I G N V + ++ + +L F D + I+ + E IE +
Sbjct: 266 QKMREKVQKIIGHGIN-CFVNRQLIYNFPEEL---FAD-AGILAIEHADFEGIERLALVT 320
Query: 136 GCRPIASLDHFTAENLVNVDLVEEI 62
G ++ D+ + L + +++EEI
Sbjct: 321 GGDIASTFDNPESVKLGHCNVIEEI 345
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 58.0 bits (134), Expect = 9e-09
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 2/263 (0%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHP-TVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAA 668
VVV+AG LL AEKL+ IHP T+I+D F+ DL N A
Sbjct: 96 VVVLAGELLREAEKLVNMKIHPMTIIADKFRS----------------DLMN------IA 133
Query: 667 ATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELI 488
T+L+SK++SQ A +AV A+ + +L ++++++ GG+++D+ L
Sbjct: 134 MTTLSSKILSQDKEYFAGLAVDAVLRLK--------GSTNLEAIQILKKTGGSLKDSFLD 185
Query: 487 QGLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDM-DHNVIVSDYAAMDRVLKEERQY 311
+G ++ + + P RIE AK+ + + K + V V A + + E+Q
Sbjct: 186 EGFIL-DKKIGLGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVAEIEAAEKQK 244
Query: 310 ILNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGC 131
+ V++I G N V + ++ + +L F D + I+ + E IE + G
Sbjct: 245 MREKVQKIIGHGIN-CFVNRQLIYNFPEEL---FAD-AGILAIEHADFEGIERLALVTGG 299
Query: 130 RPIASLDHFTAENLVNVDLVEEI 62
++ D+ + L + ++EEI
Sbjct: 300 DIASTFDNPESVKLGHCKVIEEI 322
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 52.0 bits (119), Expect = 6e-07
Identities = 57/277 (20%), Positives = 118/277 (42%), Gaps = 18/277 (6%)
Frame = -2
Query: 841 VVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNE---DALLKA 671
V+ G L+ +E+ + +G HP + DGF A + L+ +E T V + +E + L
Sbjct: 95 VLFIGELMKQSERCIDEGTHPRFLVDGFDVAKRATLEFLEKFKTSVVMGDEPDREILKMI 154
Query: 670 AATSLNSKV---------VSQHSTILAPIAVQAIRAVMEPI--VSGVGARVDLRDVKVIE 524
A T+L +KV +S + +A Q V+ + + +DL V+++
Sbjct: 155 ARTTLRTKVGAVCFLAFKLSLLGQLYEGLADQLTDIVVNAVLCIRKPDEPIDLFMVEIMH 214
Query: 523 RIGGTVEDAELIQGLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAA 344
D L++GLV+ H + + + R E + + K++++ S+
Sbjct: 215 MRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQ 274
Query: 343 MDRVLKEERQYILNIVKQIKKAGCNVLLVQKS----ILRDALSDLAVHFLDKIKTMVIKD 176
++++ ER+ + VK+I + V I + + ++ L + + ++
Sbjct: 275 REKMVAAERRQVDERVKRIIELKNKVCAGNDKNFVVINQKGIDPPSLDLLARAGIIGLRR 334
Query: 175 IEREDIEFVCKTLGCRPIASLDHFTAENLVNVDLVEE 65
+R ++E + G + S+D T + L LV E
Sbjct: 335 AKRRNMERLVLACGGEAVDSVDDLTEDCLGWAGLVYE 371
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 43.2 bits (97), Expect = 3e-04
Identities = 40/172 (23%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
Frame = -2
Query: 562 GARVDLRD-VKVIERIGGTVEDAELIQGLVIPHRAANVNGPHRIEKAKVGLIQFCISPPK 386
G +D D VKV G D+ L++G+V + AK+ ++ +
Sbjct: 307 GGSMDPTDYVKVKCLASGDPSDSNLVRGVVCSKNVKHKRMASEHVNAKLLILGGAL---- 362
Query: 385 TDMDHNVIVSDYAAMDRVLKEERQYILNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFL 206
++ + + A++D +L++E++++ IV +I+ NVLLV+KS+ S A L
Sbjct: 363 ---EYQKVTNKLASIDTILEQEKEHLRAIVAKIESRRPNVLLVEKSV-----SSYAQELL 414
Query: 205 DKIKTMVIKDIEREDIEFVCKTLGCRPIASLDHFTAENLVNVDL--VEEINE 56
K ++V+ +++R ++ + + G + +S+D+ + L +L V +++E
Sbjct: 415 AKDISLVL-NVKRPLLDRISRCSGAQIASSIDNIASARLGQCELFKVHKVSE 465
>02_04_0615 -
24410124-24410290,24410592-24410623,24410717-24410811,
24413636-24413706,24414278-24414410,24414488-24414551,
24414628-24414690,24414784-24414924,24415130-24415203,
24415346-24415470,24415545-24415686,24415775-24415777
Length = 369
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/100 (24%), Positives = 44/100 (44%)
Frame = -2
Query: 550 DLRDVKVIERIGGTVEDAELIQGLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDH 371
DL ++ I T ++ + +++P N R+ + K+GL+ C P D
Sbjct: 16 DLNIAAALKSIHSTAKEQLQLLIVILPEERGNYGKIKRVCETKLGLVSQCCLPKNVKTDT 75
Query: 370 NVIVSDYAAMDRVLKEERQYILNIVKQIKKAGCNVLLVQK 251
N+ + A+ +K RQ L ++ I GC L+Q+
Sbjct: 76 NIKYLENIALKINVKTYRQSFLVLMLAIPHQGCTRHLLQE 115
>09_04_0042 -
14055885-14056142,14057508-14057774,14057859-14059292,
14059378-14059539,14059642-14059768,14059869-14060200,
14060289-14061083,14061379-14061714,14061791-14062730,
14063338-14063588
Length = 1633
Score = 38.3 bits (85), Expect = 0.008
Identities = 27/110 (24%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = -2
Query: 379 MDHNVIVSDYAAMDRVLKEERQYILNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDK 200
+++ + + A++ +L++E++++ IV +I+ NVLLV+KS+ S A L K
Sbjct: 379 LEYQKVSNKLASIGTILEQEKEHLRMIVGKIESRRPNVLLVEKSV-----SSFAQELLAK 433
Query: 199 IKTMVIKDIEREDIEFVCKTLGCRPIASLDHFTAENLVNVDL--VEEINE 56
++V+ +++R ++ + + G + +S+D+ + L + D VE++ E
Sbjct: 434 DISLVL-NVKRPLLDRISRCTGGQIASSIDNIASARLGHCDTFKVEKVLE 482
>06_01_1053 -
8328902-8329156,8330538-8330804,8330895-8332343,
8332461-8332619,8333246-8333372,8333444-8333775,
8333859-8334593,8334735-8335073,8335160-8335313,
8335405-8336154,8336242-8336372
Length = 1565
Score = 36.7 bits (81), Expect = 0.024
Identities = 42/181 (23%), Positives = 86/181 (47%)
Frame = -2
Query: 631 STILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELIQGLVIPHRAANV 452
S I++ +A QA V P S G+ VKV G D+ I+G+V +
Sbjct: 251 SDIISSLAWQAATFV-RPDTSKGGSMDPTDYVKVKCVASGNPNDSTFIKGVVCSKNVKHK 309
Query: 451 NGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQYILNIVKQIKKAGC 272
+ E ++ L+ + +H + A+++ +L++E++Y+ V +I+
Sbjct: 310 RMVSKHENPRLLLLGGAL-------EHQKASNKLASINSILEQEKEYLKIAVAKIEAQRP 362
Query: 271 NVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGCRPIASLDHFTAEN 92
+VLLV+KS+ A L K ++V+ +++R +E + + G + +S+++ T+
Sbjct: 363 HVLLVEKSV-----PLYAQQLLAKDISLVL-NVKRSLLERISRCTGAQIASSIENVTSVR 416
Query: 91 L 89
L
Sbjct: 417 L 417
>08_01_0033 +
244930-245105,245297-245344,245835-246539,246652-246796,
246893-247240,247882-248721,248786-248832,249470-249596,
249672-249836,249973-251370,251453-251713,251802-252161
Length = 1539
Score = 31.9 bits (69), Expect = 0.70
Identities = 32/124 (25%), Positives = 58/124 (46%)
Frame = -2
Query: 538 VKVIERIGGTVEDAELIQGLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIV 359
+KV GT +E+I+GLV AA+ + P ++ L++ + +V +
Sbjct: 297 IKVKCIASGTRRQSEVIKGLVFKKNAAHKHMPTSCHNPRLLLLKGVLG------HSDVGL 350
Query: 358 SDYAAMDRVLKEERQYILNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIK 179
S + +MD+ E+ I K ++ NV+LV+K++ RD L + I M +
Sbjct: 351 SSFNSMDQ---EKDHLERAISKMMEICSPNVILVEKTVSRDIQELLLKEGVTLIFDMKLN 407
Query: 178 DIER 167
+ER
Sbjct: 408 RLER 411
>09_04_0527 - 18337968-18338077,18338440-18341212
Length = 960
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Frame = -2
Query: 388 KTDMDHNVIVSDYAAMDRVLKEERQYILNIVKQIKKAGCNVLLVQKSI--LRDALSDLAV 215
KT++ +V+ +++K+E + I +K++ GC +V+ + +R D+
Sbjct: 32 KTELKKAELVTALPVNMKLIKDELEVINAFLKELGMNGCKGEVVETWVRQVRRLAHDME- 90
Query: 214 HFLDKIKTMVIKDIEREDIEFVCKTL-GCRPIASLDHF-TAENLVNVDLVE 68
+D+ ++ K+ ERE +V K + +P+ SLD T + +N L+E
Sbjct: 91 DVVDEFMYVIGKNKERESRAYVKKIIKKPKPLFSLDEIATKADRINRQLME 141
>01_06_0768 -
31829753-31829851,31830454-31830593,31830729-31830818,
31830905-31831059,31831598-31831663,31831862-31831931,
31832299-31832429,31832516-31832702,31832828-31832894
Length = 334
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/56 (30%), Positives = 34/56 (60%)
Frame = -2
Query: 790 GIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTI 623
G+ +VIS G+ +L+ +V+EN+S + + +ED + A +L+ V S+H+ +
Sbjct: 281 GVSRSVISIGWDFSLRTVERVMENISQALAITDEDQAI--ARDALDLPVFSEHAKL 334
>12_02_0335 - 17669232-17670063,17670619-17672150
Length = 787
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 671 SCNITKFQSSFTTLNYFGTHCSASNSSSNGTYC 573
S N TKF SS +++ T CS+++S +N T C
Sbjct: 290 SSNSTKFCSSKESISLASTSCSSTSSITNPTSC 322
>06_03_0924 - 25976629-25976979,25977471-25978424,25978512-25978565,
25979135-25979254,25979357-25979532,25979624-25980107,
25980541-25980744,25981671-25981877,25982179-25982271,
25982433-25982621,25983364-25983423,25983591-25983927,
25984195-25984432,25984614-25984816,25985549-25986554,
25987125-25987290,25987715-25987824,25987944-25988195,
25988360-25988402,25988488-25988550,25989512-25989624,
25990787-25990838
Length = 1824
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -2
Query: 475 IPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDR 335
+ A GP IEKAK ++F P+ +D N+ +S D+
Sbjct: 1441 VSSEAFETEGPESIEKAKPVPVKFKCGAPEKSLDRNMSISASLVSDK 1487
>03_06_0313 + 33073542-33074464,33074901-33075069
Length = 363
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 468 CGMTNPWISSASSTVPPIRSMTFTSLRSTLAPTPLTIGSITARIACTAMGAKIVECCETT 647
C M +P ++ASS P + F+S +T +P+P T + ++ T ETT
Sbjct: 68 CLMDHPLAAAASSPAPSNGRLHFSSSAATASPSPATAAAASSAANVTPAVVDRSLFLETT 127
Query: 648 L 650
L
Sbjct: 128 L 128
>10_08_0731 +
20161962-20163628,20163721-20163862,20164181-20164490,
20164566-20166466,20166557-20166650,20166953-20167440,
20167919-20168599,20168870-20168944,20170148-20170210,
20170588-20170633,20171373-20171420,20171484-20171557
Length = 1862
Score = 28.3 bits (60), Expect = 8.6
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = -2
Query: 541 DVKVIERIGGTVE-DAELIQGLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNV 365
DV +G T+E DAE L R ++ HRIE + Q C+ P ++ V
Sbjct: 260 DVLCHRSLGETIEQDAETRTVLDDGSRNSSDGASHRIEVSACLSNQPCLKPCSGELAEEV 319
Query: 364 IVSDYAAMDRVLKEERQYILNIVKQIK-KAGCN 269
+S A + E Y ++K+ AGC+
Sbjct: 320 SLSAANAATDGVSNEHTYSETLLKERNDDAGCS 352
>10_07_0150 -
13422497-13422575,13423360-13423433,13423948-13424160,
13425143-13425214,13425320-13425745
Length = 287
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 447 PFTLAARCGMTNPWISSASSTVPPIRSMTFTSLRSTLAPTPLTIGSITARIACTAMGAKI 626
P ++AA ++ W+ A+ TVP I T+L T P + S +A + A
Sbjct: 168 PASMAAAAAASSGWLRRAAGTVPRIPCGLVTALVPTPPPPAAAVVSEAPALALPSHAAVA 227
Query: 627 VE 632
+E
Sbjct: 228 ME 229
>01_01_0967 - 7604362-7604589,7604866-7605012,7605351-7605545
Length = 189
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = -2
Query: 700 LNNEDALLKAAATSLNSKVVSQHSTILAPIA----VQAIRAVMEPIVSGVGARVDLRDVK 533
+ N D ++ A + K+V I+ I V+ ++EP S +GA++ +R+
Sbjct: 78 IKNADVVICAVGHTTPHKLVENQIKIMEAIRDAGNVKLAEQMLEPARSILGAKLRVREAL 137
Query: 532 VIERIGGTVEDAELIQGLVIPHRAAN--VNGP 443
I T+ L+ G ++P +A N +GP
Sbjct: 138 RASGIPHTIVCGYLVHGFLLP-KAGNPEADGP 168
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,203,749
Number of Sequences: 37544
Number of extensions: 475000
Number of successful extensions: 1326
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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