Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11i24
(878 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 322 2e-88
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 322 2e-88
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 126 2e-29
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 126 2e-29
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 126 2e-29
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 100 1e-21
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 100 1e-21
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 97 1e-20
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 97 1e-20
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 97 1e-20
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 94 1e-19
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 73 4e-13
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 73 4e-13
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 60 3e-09
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 59 4e-09
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 59 4e-09
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 41 0.001
AC006720-6|AAF60450.1| 346|Caenorhabditis elegans Hypothetical ... 32 0.47
U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astaci... 30 1.9
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 29 4.4
U41277-8|AAA82479.1| 285|Caenorhabditis elegans Hypothetical pr... 29 4.4
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 322 bits (792), Expect = 2e-88
Identities = 159/261 (60%), Positives = 205/261 (78%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAA 665
VVV+AGALLD+A+ LL KGIHPT IS+ FQ A A ++++ MS+PVDL+N+ L K A
Sbjct: 108 VVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVDLSNDALLNKMAT 167
Query: 664 TSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELIQ 485
TSLNSKVVSQHS +LAP+AV A++ ++ S + V+L+ +K+I+++G TVE++ELI+
Sbjct: 168 TSLNSKVVSQHSWLLAPMAVNAVKKIIN---SENDSNVNLKMIKIIKKMGDTVEESELIE 224
Query: 484 GLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQYIL 305
G +I + P RIEKAK+GLIQF ISPPKTDM++ VI++DYA MDR LKEERQY+L
Sbjct: 225 GALIDQKTMGRGAPTRIEKAKIGLIQFQISPPKTDMENQVIITDYAQMDRALKEERQYLL 284
Query: 304 NIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGCRP 125
I KQIK AGCNVLL+QKSILRDA+++LA+HFL K+K M IKDIEREDIEF + LGCRP
Sbjct: 285 EICKQIKAAGCNVLLIQKSILRDAVNELALHFLAKMKIMCIKDIEREDIEFYSRILGCRP 344
Query: 124 IASLDHFTAENLVNVDLVEEI 62
+AS+DHF A+ L DLVEEI
Sbjct: 345 VASVDHFNADALGYADLVEEI 365
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 322 bits (792), Expect = 2e-88
Identities = 159/261 (60%), Positives = 205/261 (78%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAA 665
VVV+AGALLD+A+ LL KGIHPT IS+ FQ A A ++++ MS+PVDL+N+ L K A
Sbjct: 108 VVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVDLSNDALLNKMAT 167
Query: 664 TSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELIQ 485
TSLNSKVVSQHS +LAP+AV A++ ++ S + V+L+ +K+I+++G TVE++ELI+
Sbjct: 168 TSLNSKVVSQHSWLLAPMAVNAVKKIIN---SENDSNVNLKMIKIIKKMGDTVEESELIE 224
Query: 484 GLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQYIL 305
G +I + P RIEKAK+GLIQF ISPPKTDM++ VI++DYA MDR LKEERQY+L
Sbjct: 225 GALIDQKTMGRGAPTRIEKAKIGLIQFQISPPKTDMENQVIITDYAQMDRALKEERQYLL 284
Query: 304 NIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGCRP 125
I KQIK AGCNVLL+QKSILRDA+++LA+HFL K+K M IKDIEREDIEF + LGCRP
Sbjct: 285 EICKQIKAAGCNVLLIQKSILRDAVNELALHFLAKMKIMCIKDIEREDIEFYSRILGCRP 344
Query: 124 IASLDHFTAENLVNVDLVEEI 62
+AS+DHF A+ L DLVEEI
Sbjct: 345 VASVDHFNADALGYADLVEEI 365
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 126 bits (304), Expect = 2e-29
Identities = 78/261 (29%), Positives = 134/261 (51%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAA 665
VVV+AGALL+ AEKL+ +GIHP I+DGF A + AL+ ++++S + N + L++ A
Sbjct: 110 VVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVENRERLVETAQ 169
Query: 664 TSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELIQ 485
TSL SK+V++ A IAV A+ +V + I S V+ +K+ ++GG +ED L++
Sbjct: 170 TSLGSKIVNRSLRQFAEIAVDAVLSVAD-IES---KDVNFEMIKMEGKVGGRLEDTILVK 225
Query: 484 GLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQYIL 305
G+VI ++ P ++ AKV ++ PPK H + ++ + ER+
Sbjct: 226 GIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRDYERETFE 285
Query: 304 NIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGCRP 125
+++Q+K++G + + Q D A H L ++ + +IE + R
Sbjct: 286 TMIRQVKESGATLAICQW-----GFDDEANHLLQANDLPAVRWVGGPEIELLAIATNARI 340
Query: 124 IASLDHFTAENLVNVDLVEEI 62
+ + E L LV EI
Sbjct: 341 VPRFSELSKEKLGTAGLVREI 361
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 126 bits (304), Expect = 2e-29
Identities = 78/261 (29%), Positives = 134/261 (51%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAA 665
VVV+AGALL+ AEKL+ +GIHP I+DGF A + AL+ ++++S + N + L++ A
Sbjct: 110 VVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVENRERLVETAQ 169
Query: 664 TSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELIQ 485
TSL SK+V++ A IAV A+ +V + I S V+ +K+ ++GG +ED L++
Sbjct: 170 TSLGSKIVNRSLRQFAEIAVDAVLSVAD-IES---KDVNFEMIKMEGKVGGRLEDTILVK 225
Query: 484 GLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQYIL 305
G+VI ++ P ++ AKV ++ PPK H + ++ + ER+
Sbjct: 226 GIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRDYERETFE 285
Query: 304 NIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGCRP 125
+++Q+K++G + + Q D A H L ++ + +IE + R
Sbjct: 286 TMIRQVKESGATLAICQW-----GFDDEANHLLQANDLPAVRWVGGPEIELLAIATNARI 340
Query: 124 IASLDHFTAENLVNVDLVEEI 62
+ + E L LV EI
Sbjct: 341 VPRFSELSKEKLGTAGLVREI 361
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 126 bits (304), Expect = 2e-29
Identities = 78/261 (29%), Positives = 134/261 (51%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAA 665
VVV+AGALL+ AEKL+ +GIHP I+DGF A + AL+ ++++S + N + L++ A
Sbjct: 110 VVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVENRERLVETAQ 169
Query: 664 TSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELIQ 485
TSL SK+V++ A IAV A+ +V + I S V+ +K+ ++GG +ED L++
Sbjct: 170 TSLGSKIVNRSLRQFAEIAVDAVLSVAD-IES---KDVNFEMIKMEGKVGGRLEDTILVK 225
Query: 484 GLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQYIL 305
G+VI ++ P ++ AKV ++ PPK H + ++ + ER+
Sbjct: 226 GIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRDYERETFE 285
Query: 304 NIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGCRP 125
+++Q+K++G + + Q D A H L ++ + +IE + R
Sbjct: 286 TMIRQVKESGATLAICQW-----GFDDEANHLLQANDLPAVRWVGGPEIELLAIATNARI 340
Query: 124 IASLDHFTAENLVNVDLVEEI 62
+ + E L LV EI
Sbjct: 341 VPRFSELSKEKLGTAGLVREI 361
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 100 bits (240), Expect = 1e-21
Identities = 64/264 (24%), Positives = 129/264 (48%), Gaps = 1/264 (0%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVV-ENMSTPVDLNNEDALLKAA 668
VV++A LL A++L+++ +HPT I +G++ A + A++ + EN+S D +++ AA
Sbjct: 97 VVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTSDSIGRQSVVNAA 156
Query: 667 ATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELI 488
TS++SK++ + + V A AV + + + V V++ G + ++ L+
Sbjct: 157 KTSMSSKIIGPDADFFGELVVDAAEAVR--VENNGKVTYPINAVNVLKAHGKSARESVLV 214
Query: 487 QGLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQYI 308
+G + A+ P R++ AK+ + F + K + +V+V D A ++ + +EE
Sbjct: 215 KGYALNCTVASQAMPLRVQNAKIACLDFSLMKAKMHLGISVVVEDPAKLEAIRREEFDIT 274
Query: 307 LNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGCR 128
+ +I KAG NV+L I DL + + M ++ ++ D++ + K G
Sbjct: 275 KRRIDKILKAGANVVLTTGGI-----DDLCLKQFVESGAMAVRRCKKSDLKRIAKATGAT 329
Query: 127 PIASLDHFTAENLVNVDLVEEINE 56
SL + + L+ +E
Sbjct: 330 LTVSLATLEGDEAFDASLLGHADE 353
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 100 bits (240), Expect = 1e-21
Identities = 64/264 (24%), Positives = 129/264 (48%), Gaps = 1/264 (0%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVV-ENMSTPVDLNNEDALLKAA 668
VV++A LL A++L+++ +HPT I +G++ A + A++ + EN+S D +++ AA
Sbjct: 97 VVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTSDSIGRQSVVNAA 156
Query: 667 ATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELI 488
TS++SK++ + + V A AV + + + V V++ G + ++ L+
Sbjct: 157 KTSMSSKIIGPDADFFGELVVDAAEAVR--VENNGKVTYPINAVNVLKAHGKSARESVLV 214
Query: 487 QGLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQYI 308
+G + A+ P R++ AK+ + F + K + +V+V D A ++ + +EE
Sbjct: 215 KGYALNCTVASQAMPLRVQNAKIACLDFSLMKAKMHLGISVVVEDPAKLEAIRREEFDIT 274
Query: 307 LNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGCR 128
+ +I KAG NV+L I DL + + M ++ ++ D++ + K G
Sbjct: 275 KRRIDKILKAGANVVLTTGGI-----DDLCLKQFVESGAMAVRRCKKSDLKRIAKATGAT 329
Query: 127 PIASLDHFTAENLVNVDLVEEINE 56
SL + + L+ +E
Sbjct: 330 LTVSLATLEGDEAFDASLLGHADE 353
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 97.5 bits (232), Expect = 1e-20
Identities = 76/262 (29%), Positives = 131/262 (50%), Gaps = 1/262 (0%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAA 665
V V+A LL AEKL+ + IHP I G+++AL +A + ++ S N D LLK A
Sbjct: 99 VTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIAR 158
Query: 664 TSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELIQ 485
T+L SK++SQH A +AV A+ + G G +L +++I+++GG++ ++ L +
Sbjct: 159 TTLGSKILSQHKEHFAQLAVDAVLR-----LKGSG---NLDAIQIIKKLGGSMNESYLDE 210
Query: 484 GLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDM-DHNVIVSDYAAMDRVLKEERQYI 308
G ++ + + P R+EKAK+ + + K + V V A + + E+ +
Sbjct: 211 GFLL-EKLPGMFQPRRVEKAKILIANTPMDTDKVKVFGSRVRVDGVAKVAELEAAEKLKM 269
Query: 307 LNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGCR 128
V +I CNV + + ++ + L F D K M I+ + E IE + LG
Sbjct: 270 KEKVDKILAHNCNV-FINRQLIYNYPEQL---FAD-AKVMAIEHADFEGIERLALVLGGE 324
Query: 127 PIASLDHFTAENLVNVDLVEEI 62
+++ D + DL+EEI
Sbjct: 325 IVSTFDSPQTAQFGSCDLIEEI 346
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 97.5 bits (232), Expect = 1e-20
Identities = 76/262 (29%), Positives = 131/262 (50%), Gaps = 1/262 (0%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAA 665
V V+A LL AEKL+ + IHP I G+++AL +A + ++ S N D LLK A
Sbjct: 99 VTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIAR 158
Query: 664 TSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELIQ 485
T+L SK++SQH A +AV A+ + G G +L +++I+++GG++ ++ L +
Sbjct: 159 TTLGSKILSQHKEHFAQLAVDAVLR-----LKGSG---NLDAIQIIKKLGGSMNESYLDE 210
Query: 484 GLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDM-DHNVIVSDYAAMDRVLKEERQYI 308
G ++ + + P R+EKAK+ + + K + V V A + + E+ +
Sbjct: 211 GFLL-EKLPGMFQPRRVEKAKILIANTPMDTDKVKVFGSRVRVDGVAKVAELEAAEKLKM 269
Query: 307 LNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGCR 128
V +I CNV + + ++ + L F D K M I+ + E IE + LG
Sbjct: 270 KEKVDKILAHNCNV-FINRQLIYNYPEQL---FAD-AKVMAIEHADFEGIERLALVLGGE 324
Query: 127 PIASLDHFTAENLVNVDLVEEI 62
+++ D + DL+EEI
Sbjct: 325 IVSTFDSPQTAQFGSCDLIEEI 346
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 97.5 bits (232), Expect = 1e-20
Identities = 76/262 (29%), Positives = 131/262 (50%), Gaps = 1/262 (0%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAA 665
V V+A LL AEKL+ + IHP I G+++AL +A + ++ S N D LLK A
Sbjct: 99 VTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIAR 158
Query: 664 TSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELIQ 485
T+L SK++SQH A +AV A+ + G G +L +++I+++GG++ ++ L +
Sbjct: 159 TTLGSKILSQHKEHFAQLAVDAVLR-----LKGSG---NLDAIQIIKKLGGSMNESYLDE 210
Query: 484 GLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDM-DHNVIVSDYAAMDRVLKEERQYI 308
G ++ + + P R+EKAK+ + + K + V V A + + E+ +
Sbjct: 211 GFLL-EKLPGMFQPRRVEKAKILIANTPMDTDKVKVFGSRVRVDGVAKVAELEAAEKLKM 269
Query: 307 LNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLGCR 128
V +I CNV + + ++ + L F D K M I+ + E IE + LG
Sbjct: 270 KEKVDKILAHNCNV-FINRQLIYNYPEQL---FAD-AKVMAIEHADFEGIERLALVLGGE 324
Query: 127 PIASLDHFTAENLVNVDLVEEI 62
+++ D + DL+EEI
Sbjct: 325 IVSTFDSPQTAQFGSCDLIEEI 346
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 93.9 bits (223), Expect = 1e-19
Identities = 61/244 (25%), Positives = 128/244 (52%), Gaps = 3/244 (1%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVEN-MSTPVDLNNEDALLKAA 668
V+++AG ++ A+ L++ HPT+I +++AL+ +Q EN S VD+ ++ + K
Sbjct: 100 VIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMIQWSENKFSKTVDITDDAEIAKVV 159
Query: 667 ATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGAR-VDLRDVKVIERI-GGTVEDAE 494
+ L +K++S+ + I++QA++ + V G R +D++ IE+I GG +ED++
Sbjct: 160 KSCLGTKMISKWMDLAVNISIQAVKTIR---VEKAGVREIDIKRYCRIEKIPGGRIEDSQ 216
Query: 493 LIQGLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQ 314
+++G+V+ + RIE ++ L+ + K + ++ + + +L++E Q
Sbjct: 217 VVKGIVVNKDILHAKMRRRIENPRIVLLDCNLEYKKGESQTSLEIMREEDISAILEQEEQ 276
Query: 313 YILNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEFVCKTLG 134
I +I K +++ +K I SDLA HFL K ++ +++ D + + G
Sbjct: 277 AIRKQCDEIIKLKPDLVFTEKGI-----SDLAQHFLLKAGITCLRRLKKTDNNRLARVCG 331
Query: 133 CRPI 122
R +
Sbjct: 332 ARVV 335
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 72.5 bits (170), Expect = 4e-13
Identities = 67/272 (24%), Positives = 127/272 (46%), Gaps = 13/272 (4%)
Frame = -2
Query: 841 VVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAAT 662
V++ G LL AE L+ +G+HP ++++GF+ A L+++E + D L++ T
Sbjct: 96 VLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKFKKEAPV-ERDLLVEVCRT 154
Query: 661 SLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELIQG 482
+L +K+ + + + V A+ A+ G DL V+ +E + D L++G
Sbjct: 155 ALRTKLHQKLADHITECVVDAVLAIRRD-----GEEPDLHMVEKMEMHHDSDMDTTLVRG 209
Query: 481 LVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQYILN 302
LV+ H A + + P ++ A + + KT+++ + + +L ER++I
Sbjct: 210 LVLDHGARHPDMPRHVKDAYILTCNVSLEYEKTEVNSGLFYKTAKEREALLAAEREFITR 269
Query: 301 IVKQI----KKA------GCN---VLLVQKSILRDALSDLAVHFLDKIKTMVIKDIERED 161
V +I KK G N V++ QK I +L LA + + ++ +R +
Sbjct: 270 RVHKIIELKKKVIDNSPDGKNKGFVVINQKGIDPPSLDLLASEGI-----LALRRAKRRN 324
Query: 160 IEFVCKTLGCRPIASLDHFTAENLVNVDLVEE 65
+E + +G + S+D T E+L LV E
Sbjct: 325 MERLQLAVGGEAVNSVDDLTPEDLGWAGLVYE 356
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 72.5 bits (170), Expect = 4e-13
Identities = 67/272 (24%), Positives = 127/272 (46%), Gaps = 13/272 (4%)
Frame = -2
Query: 841 VVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAAT 662
V++ G LL AE L+ +G+HP ++++GF+ A L+++E + D L++ T
Sbjct: 96 VLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKFKKEAPV-ERDLLVEVCRT 154
Query: 661 SLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAELIQG 482
+L +K+ + + + V A+ A+ G DL V+ +E + D L++G
Sbjct: 155 ALRTKLHQKLADHITECVVDAVLAIRRD-----GEEPDLHMVEKMEMHHDSDMDTTLVRG 209
Query: 481 LVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERQYILN 302
LV+ H A + + P ++ A + + KT+++ + + +L ER++I
Sbjct: 210 LVLDHGARHPDMPRHVKDAYILTCNVSLEYEKTEVNSGLFYKTAKEREALLAAEREFITR 269
Query: 301 IVKQI----KKA------GCN---VLLVQKSILRDALSDLAVHFLDKIKTMVIKDIERED 161
V +I KK G N V++ QK I +L LA + + ++ +R +
Sbjct: 270 RVHKIIELKKKVIDNSPDGKNKGFVVINQKGIDPPSLDLLASEGI-----LALRRAKRRN 324
Query: 160 IEFVCKTLGCRPIASLDHFTAENLVNVDLVEE 65
+E + +G + S+D T E+L LV E
Sbjct: 325 MERLQLAVGGEAVNSVDDLTPEDLGWAGLVYE 356
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 59.7 bits (138), Expect = 3e-09
Identities = 36/159 (22%), Positives = 70/159 (44%)
Frame = -2
Query: 538 VKVIERIGGTVEDAELIQGLVIPHRAANVNGPHRIEKAKVGLIQFCISPPKTDMDHNVIV 359
+K+ ++GG +ED L++G+VI ++ P ++ AKV ++ PPK H + +
Sbjct: 2 IKMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDI 61
Query: 358 SDYAAMDRVLKEERQYILNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIK 179
+ + ER+ +++Q+K++G + + Q D A H L ++
Sbjct: 62 TSTEDFKALRDYERETFETMIRQVKESGATLAICQW-----GFDDEANHLLQANDLPAVR 116
Query: 178 DIEREDIEFVCKTLGCRPIASLDHFTAENLVNVDLVEEI 62
+ +IE + R + + E L LV EI
Sbjct: 117 WVGGPEIELLAIATNARIVPRFSELSKEKLGTAGLVREI 155
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 59.3 bits (137), Expect = 4e-09
Identities = 47/201 (23%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNE--DALLKA 671
VVV+A +L + ++ G+HP ++ KA + L+ + ++ ++ E + L+K
Sbjct: 97 VVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIKINGETELREMLVKC 156
Query: 670 AATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAEL 491
AAT+L+SK+VSQ A + V A V+ + A + L + + + GG + ++ L
Sbjct: 157 AATTLSSKLVSQERLFFANMIVDA--------VNTLDAHLPLNMIGIKKVNGGNLHESRL 208
Query: 490 IQGLVIPHRAANVNG----PHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKE 323
I+G+ +A + G P + KV L+ + + + +++ + V+
Sbjct: 209 IKGVAF-QKAFSYAGFEMQPKKYSNVKVALLNIELELKAEKENAEMRLTNVSDFQAVVDA 267
Query: 322 ERQYILNIVKQIKKAGCNVLL 260
E + + +++I +G NV+L
Sbjct: 268 EWNILYDKLQKIHDSGANVVL 288
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 59.3 bits (137), Expect = 4e-09
Identities = 47/201 (23%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNE--DALLKA 671
VVV+A +L + ++ G+HP ++ KA + L+ + ++ ++ E + L+K
Sbjct: 97 VVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIKINGETELREMLVKC 156
Query: 670 AATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVEDAEL 491
AAT+L+SK+VSQ A + V A V+ + A + L + + + GG + ++ L
Sbjct: 157 AATTLSSKLVSQERLFFANMIVDA--------VNTLDAHLPLNMIGIKKVNGGNLHESRL 208
Query: 490 IQGLVIPHRAANVNG----PHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKE 323
I+G+ +A + G P + KV L+ + + + +++ + V+
Sbjct: 209 IKGVAF-QKAFSYAGFEMQPKKYSNVKVALLNIELELKAEKENAEMRLTNVSDFQAVVDA 267
Query: 322 ERQYILNIVKQIKKAGCNVLL 260
E + + +++I +G NV+L
Sbjct: 268 EWNILYDKLQKIHDSGANVVL 288
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 40.7 bits (91), Expect = 0.001
Identities = 74/314 (23%), Positives = 131/314 (41%), Gaps = 35/314 (11%)
Frame = -2
Query: 844 VVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLAL---------------------QV 728
VV++A ALL+ A L+ G+ P ++ G+++A + AL Q
Sbjct: 103 VVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILPTLVVKEATDMKNIEEVRQY 162
Query: 727 VENMSTPVDLNNEDALL----KAAATSL--NSKVVSQHSTILAPIAVQAIRA--VMEPIV 572
+ + T +NED + KA T+ NS + + + I + VM +V
Sbjct: 163 IRSAITSKQYDNEDIIADLVAKACVTTCPANSFNFNVDNIRICKIIGSGVHTSTVMNGMV 222
Query: 571 SGVGARVDLRDVKVIERIGGTVEDAELIQ----GLVIPHRAANVNGPHRIEKAKVGLIQF 404
GA ++R+ + RI +L Q G V+ A + + E+A+V
Sbjct: 223 FKRGAEGEIREARDA-RIAVYTCPFDLTQTETKGTVLIENADELRNFSKGEEAEVEEQVK 281
Query: 403 CISPPKTDMDHNVIVSDYAAMDRVLKEERQYILNIVKQIKKAGCNVLLVQKSILRDALSD 224
I+ D + I++ + M+ EE + VK I G V+ + D
Sbjct: 282 AIA----DNARSSILAKFWLMNFSKGEEAEVEEQQVKAIADNGVKVV-----VAAGKFGD 332
Query: 223 LAVHFLDKIKTMVIKDIEREDIEFVCKTLGCRPIASLDHFTAENLVNVD--LVEEINEXW 50
+ +HFL+K K M ++ + D+ +C+T+G +P A + L + D V+EI +
Sbjct: 333 MYLHFLNKYKIMAVRLTSKFDLRRLCRTVGAQPQARICAPAVNLLGHCDSVAVQEIGDEN 392
Query: 49 WKIYKGKLRWLKVA 8
++ K KVA
Sbjct: 393 VVVFDKKSETGKVA 406
>AC006720-6|AAF60450.1| 346|Caenorhabditis elegans Hypothetical
protein Y17G9B.9 protein.
Length = 346
Score = 32.3 bits (70), Expect = 0.47
Identities = 26/115 (22%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Frame = -2
Query: 493 LIQGLVIPHRAANVNGPHRIEKAKVGLIQFCIS-PPKTDMDHNVIVSDYAAMDRVLKEER 317
+++ L AN R+E A+ G C S PP+ +++H+VI+ + ++++E
Sbjct: 8 VLRDLTATRYVANYAEEDRLETARAG----CSSLPPQPNINHDVIIEGHGEDVELVEDEN 63
Query: 316 QYILNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIKTMVIKDIEREDIEF 152
++ + + K LV K + + D AV L I+T+ I+++ + ++
Sbjct: 64 YCSVHRIDETPK------LVDKKPSKTIIRDEAVKVLRHIQTVPIENLRLKRYDY 112
>U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astacin
protease protein38 protein.
Length = 745
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 316 GVLPSTHDP-LLHNLIQ*HCGPYQFWEAKC 402
GVLPST P +++++++ CG + W+ +C
Sbjct: 612 GVLPSTQAPDIINSVLECGCGAWSEWQGEC 641
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 686 CFAQGSCNITKFQSSFTTLNYFGTH 612
C Q C+ KF++SF +NYF H
Sbjct: 681 CGKQTWCDSGKFENSFDLINYFSAH 705
>U41277-8|AAA82479.1| 285|Caenorhabditis elegans Hypothetical
protein C06E4.8 protein.
Length = 285
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/68 (25%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 349 AAMDRVLKEERQYILNIVKQIKKAGCNVLLVQKSILRDALSDLAVHFLDKIK-TMVIKDI 173
A + R + ++R++ ++K ++ C +K L +LSDL F++K+K M + +
Sbjct: 41 AELRRQIGKQRKHYEQLIKNVRAKHCK----EKEELEKSLSDLYDKFIEKLKYLMELNAL 96
Query: 172 EREDIEFV 149
++E+ + V
Sbjct: 97 DKENGKLV 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,534,620
Number of Sequences: 27780
Number of extensions: 452881
Number of successful extensions: 1375
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -