Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11i08
(899 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 25 1.2
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 25 1.2
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 25 1.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 1.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 25 1.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.6
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 3.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 3.8
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 23 3.8
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 5.0
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 5.0
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 5.0
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 5.0
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 5.0
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 23 5.0
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 23 5.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 6.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 6.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 6.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 6.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 6.6
DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein. 22 8.8
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 878 ISSIENYIINAYNPDYIDNNAYNSDYTECTGIRLPV 771
ISS+ N I+ N +Y YN +Y E + +PV
Sbjct: 82 ISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPV 117
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 878 ISSIENYIINAYNPDYIDNNAYNSDYTECTGIRLPV 771
ISS+ N I+ N +Y YN +Y E + +PV
Sbjct: 82 ISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPV 117
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 878 ISSIENYIINAYNPDYIDNNAYNSDYTECTGIRLPV 771
ISS+ N I+ N +Y YN +Y E + +PV
Sbjct: 82 ISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPV 117
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 881 TISSIENYIINAYNPDYIDNNAYNSDY 801
TI + NY N N +Y +NN YN++Y
Sbjct: 322 TIHNNNNYKYNYNNNNY-NNNNYNNNY 347
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 878 ISSIENYIINAYNPDYIDNNAYNSDYTECTGIRLPV 771
ISS+ N I+ N +Y YN +Y E + +PV
Sbjct: 315 ISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPV 350
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 866 ENYIINAYNPDYIDNNAYNSDYTE 795
E IN N DY+DN + + TE
Sbjct: 165 EEQTINRKNSDYLDNQEVSMENTE 188
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.0 bits (47), Expect = 3.8
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = -2
Query: 487 SVGPGSYFTIPGQTALYYLYYPLDRTHSTAQRSQRSINCV*VATAWQE 344
SV G FT + YYPLD + T + + V W+E
Sbjct: 148 SVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKE 195
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 881 TISSIENYIINAYNPDYIDNNAYNS 807
TI + NY N YN +NN YN+
Sbjct: 89 TIHNNNNYNNNNYNNYNYNNNNYNN 113
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 504 GTINIIVSAPGLILRYQVKRHYTTYTIRW 418
G ++ V A GL++ Y+V R+ IRW
Sbjct: 35 GFLDNSVWADGLLVFYEVFRYLELAMIRW 63
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 5.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -1
Query: 878 ISSIEN-YIINAYNPDYIDNNAYNSDYTECTGIRLPV 771
ISS+ N Y + YN + YN +Y E + +PV
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPV 118
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 5.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -1
Query: 878 ISSIEN-YIINAYNPDYIDNNAYNSDYTECTGIRLPV 771
ISS+ N Y + YN + YN +Y E + +PV
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPV 118
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 5.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -1
Query: 878 ISSIEN-YIINAYNPDYIDNNAYNSDYTECTGIRLPV 771
ISS+ N Y + YN + YN +Y E + +PV
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPV 118
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 5.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -1
Query: 878 ISSIEN-YIINAYNPDYIDNNAYNSDYTECTGIRLPV 771
ISS+ N Y + YN + YN +Y E + +PV
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPV 118
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 5.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -1
Query: 878 ISSIEN-YIINAYNPDYIDNNAYNSDYTECTGIRLPV 771
ISS+ N Y + YN + YN +Y E + +PV
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPVPV 118
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 457 PGQTALYYLYYPLDRTHSTAQRSQR 383
P LYY +YPL+R T R
Sbjct: 24 PKDPYLYYDFYPLERGELTNSGKMR 48
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 457 PGQTALYYLYYPLDRTHSTAQRSQR 383
P LYY +YPL+R T R
Sbjct: 39 PKDPYLYYDFYPLERGELTNSGKMR 63
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 863 NYIINAYNPDYIDNNAYNSDYTECTGIRLPV 771
NY N N +Y YN +Y E I +PV
Sbjct: 94 NYKYNYNNNNYNKKLYYNINYIEQIPIPVPV 124
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 863 NYIINAYNPDYIDNNAYNSDYTECTGIRLPV 771
NY N N +Y YN +Y E I +PV
Sbjct: 94 NYKYNYNNNNYNKKLYYNINYIEQIPIPVPV 124
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 863 NYIINAYNPDYIDNNAYNSDYTECTGIRLPV 771
NY N N +Y YN +Y E I +PV
Sbjct: 94 NYKYNYNNNNYNKKLYYNINYIEQIPIPVPV 124
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 863 NYIINAYNPDYIDNNAYNSDYTECTGIRLPV 771
NY N N +Y YN +Y E I +PV
Sbjct: 94 NYKYNYNNNNYNKKLYYNINYIEQIPIPVPV 124
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 6.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 281 LAVLISLSTMRRQVCTGRPGL 343
+A + M +++C G+PGL
Sbjct: 479 MAFAYAFRDMHKELCDGKPGL 499
>DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein.
Length = 135
Score = 21.8 bits (44), Expect = 8.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 833 YIDNNAYNSDYTECTGI 783
Y+D N N TEC+ I
Sbjct: 91 YLDENEVNKLITECSAI 107
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,573
Number of Sequences: 438
Number of extensions: 5888
Number of successful extensions: 41
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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