Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11h10
(869 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB075868-1|BAB85574.2| 636|Homo sapiens KIAA1988 protein protein. 64 5e-10
AK074795-1|BAC11214.1| 686|Homo sapiens protein ( Homo sapiens ... 64 6e-10
BC009348-1|AAH09348.1| 686|Homo sapiens cirrhosis, autosomal re... 64 8e-10
BC000167-1|AAH00167.1| 533|Homo sapiens Unknown (protein for IM... 64 8e-10
AK027675-1|BAB55287.1| 686|Homo sapiens protein ( Homo sapiens ... 64 8e-10
AK027634-1|BAB55251.1| 686|Homo sapiens protein ( Homo sapiens ... 64 8e-10
AK027419-1|BAB55100.1| 505|Homo sapiens protein ( Homo sapiens ... 63 1e-09
AK027584-1|BAB55212.1| 139|Homo sapiens protein ( Homo sapiens ... 43 0.001
AK027445-1|BAB55116.1| 475|Homo sapiens protein ( Homo sapiens ... 42 0.002
BC101514-1|AAI01515.1| 489|Homo sapiens leukocyte immunoglobuli... 33 1.3
BC093708-1|AAH93708.1| 489|Homo sapiens leukocyte immunoglobuli... 33 1.3
AF025530-1|AAB87664.1| 489|Homo sapiens leucocyte immunoglobuli... 33 1.3
AF025529-1|AAB87663.1| 289|Homo sapiens leucocyte immunoglobuli... 33 1.3
AF014924-1|AAC51886.1| 375|Homo sapiens immunoglobulin-like tra... 31 7.2
AL035454-2|CAI42112.1| 836|Homo sapiens Crn, crooked neck-like ... 30 9.5
AL035454-1|CAI42113.1| 848|Homo sapiens Crn, crooked neck-like ... 30 9.5
AK023728-1|BAB14659.1| 512|Homo sapiens protein ( Homo sapiens ... 30 9.5
AK023246-1|BAB14485.1| 564|Homo sapiens protein ( Homo sapiens ... 30 9.5
AK022908-1|BAB14303.1| 564|Homo sapiens protein ( Homo sapiens ... 30 9.5
AF318303-1|AAK01925.1| 848|Homo sapiens CGI-201 protein, type I... 30 9.5
AF318302-1|AAK01924.1| 687|Homo sapiens CGI-201 protein, short ... 30 9.5
AF255443-1|AAF65571.2| 836|Homo sapiens CGI-201 protein protein. 30 9.5
AF111802-1|AAL39004.1| 687|Homo sapiens MSTP021 protein. 30 9.5
>AB075868-1|BAB85574.2| 636|Homo sapiens KIAA1988 protein protein.
Length = 636
Score = 64.5 bits (150), Expect = 5e-10
Identities = 58/258 (22%), Positives = 111/258 (43%), Gaps = 11/258 (4%)
Frame = -3
Query: 861 LLSLQTKGKKQIQSCAISPNGELIVYSTESHTRMLKLDSDDESNVYLSKVI-LNGSITTC 685
LL L+TKG + I ISP G I YST S + +L+ + + N+ L +V + + +
Sbjct: 393 LLHLKTKGPENIICSCISPCGSWIAYSTVSRFFLYRLNYEHD-NISLKRVSKMPAFLRSA 451
Query: 684 SHFAFTEDS-KVLIVYNAGTISFLQVDPEAGVTVTQTINTKKHLSCKSILHFQISKKC-- 514
F+EDS K+ + N G + +Q+ + KHL + C
Sbjct: 452 LQILFSEDSTKLFVASNQGALHIVQLSG----------GSFKHLHAFQPQSGTVEAMCLL 501
Query: 513 ---PSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVD 343
P +L + T + ++ K+ + + T+P Y+ +AM + L++A+ D
Sbjct: 502 AVSPDGN-WLAASGTSAGVHVYNV--KQLKLHCTVPAYNFPVTAMAIAPNTNNLVIAHSD 558
Query: 342 RKVVEYELFEKKFSDWPGSAMPP----VWYDTKQCVLSVHPHPSGQSVVFQHLRDLFVLD 175
++V EY + +K+++DW + +W + + HP + H +F +
Sbjct: 559 QQVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDTPITHISFHPKRPMHILLHDAYMFCII 618
Query: 174 RKAQFEMEPTKKKKSADA 121
K+ K S+++
Sbjct: 619 DKSLVSSSLLPPKSSSES 636
>AK074795-1|BAC11214.1| 686|Homo sapiens protein ( Homo sapiens cDNA
FLJ90314 fis, clone NT2RP2001469, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 686
Score = 64.1 bits (149), Expect = 6e-10
Identities = 57/250 (22%), Positives = 108/250 (43%), Gaps = 11/250 (4%)
Frame = -3
Query: 861 LLSLQTKGKKQIQSCAISPNGELIVYSTESHTRMLKLDSDDESNVYLSKVI-LNGSITTC 685
LL L+TKG + I ISP G I YST S + +L S + N+ L +V + + +
Sbjct: 382 LLHLKTKGPENIICSCISPCGSWIAYSTVSRFFLYRL-SYEHDNISLKRVSKMPAFLRSA 440
Query: 684 SHFAFTEDS-KVLIVYNAGTISFLQVDPEAGVTVTQTINTKKHLSCKSILHFQISKKC-- 514
F+EDS K+ + N G + +Q+ + KHL + C
Sbjct: 441 LQILFSEDSTKLFVASNQGALHIVQLSG----------GSFKHLHAFQPQSGTVEAMCLL 490
Query: 513 --PSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
+ +L + T + ++ K+ + + T+P Y+ +AM + L++A+ D+
Sbjct: 491 AVSPDGNWLAASGTSAGVHVYNV--KQLKLHCTVPAYNFPVTAMAIAPNTNNLVIAHSDQ 548
Query: 339 KVVEYELFEKKFSDWPGSAMPP----VWYDTKQCVLSVHPHPSGQSVVFQHLRDLF-VLD 175
+V EY + +K+++DW + +W + + HP + H +F ++D
Sbjct: 549 QVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDTPITHISFHPKRPMHILLHDAYMFCIID 608
Query: 174 RKAQFEMEPT 145
+ + T
Sbjct: 609 KSLPLPNDKT 618
>BC009348-1|AAH09348.1| 686|Homo sapiens cirrhosis, autosomal
recessive 1A (cirhin) protein.
Length = 686
Score = 63.7 bits (148), Expect = 8e-10
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 11/250 (4%)
Frame = -3
Query: 861 LLSLQTKGKKQIQSCAISPNGELIVYSTESHTRMLKLDSDDESNVYLSKVI-LNGSITTC 685
LL L+TKG + I ISP G I YST S + +L+ + + N+ L +V + + +
Sbjct: 382 LLHLKTKGPENIICSCISPCGSWIAYSTVSRFFLYRLNYEHD-NISLKRVSKMPAFLRSA 440
Query: 684 SHFAFTEDS-KVLIVYNAGTISFLQVDPEAGVTVTQTINTKKHLSCKSILHFQISKKC-- 514
F+EDS K+ + N G + +Q+ + KHL + C
Sbjct: 441 LQILFSEDSTKLFVASNQGALHIVQLSG----------GSFKHLHAFQPQSGTVEAMCLL 490
Query: 513 --PSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
+ +L + T + ++ K+ + + T+P Y+ +AM + L++A+ D+
Sbjct: 491 AVSPDGNWLAASGTSAGVHVYNV--KQLKLHCTVPAYNFPVTAMAIAPNTNNLVIAHSDQ 548
Query: 339 KVVEYELFEKKFSDWPGSAMPP----VWYDTKQCVLSVHPHPSGQSVVFQHLRDLF-VLD 175
+V EY + +K+++DW + +W + + HP + H +F ++D
Sbjct: 549 QVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDTPITHISFHPKRPMHILLHDAYMFCIID 608
Query: 174 RKAQFEMEPT 145
+ + T
Sbjct: 609 KSLPLPNDKT 618
>BC000167-1|AAH00167.1| 533|Homo sapiens Unknown (protein for
IMAGE:2900671) protein.
Length = 533
Score = 63.7 bits (148), Expect = 8e-10
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 11/250 (4%)
Frame = -3
Query: 861 LLSLQTKGKKQIQSCAISPNGELIVYSTESHTRMLKLDSDDESNVYLSKVI-LNGSITTC 685
LL L+TKG + I ISP G I YST S + +L+ + + N+ L +V + + +
Sbjct: 229 LLHLKTKGPENIICSCISPCGSWIAYSTVSRFFLYRLNYEHD-NISLKRVSKMPAFLRSA 287
Query: 684 SHFAFTEDS-KVLIVYNAGTISFLQVDPEAGVTVTQTINTKKHLSCKSILHFQISKKC-- 514
F+EDS K+ + N G + +Q+ + KHL + C
Sbjct: 288 LQILFSEDSTKLFVASNQGALHIVQLSG----------GSFKHLHAFQPQSGTVEAMCLL 337
Query: 513 --PSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
+ +L + T + ++ K+ + + T+P Y+ +AM + L++A+ D+
Sbjct: 338 AVSPDGNWLAASGTSAGVHVYNV--KQLKLHCTVPAYNFPVTAMAIAPNTNNLVIAHSDQ 395
Query: 339 KVVEYELFEKKFSDWPGSAMPP----VWYDTKQCVLSVHPHPSGQSVVFQHLRDLF-VLD 175
+V EY + +K+++DW + +W + + HP + H +F ++D
Sbjct: 396 QVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDTPITHISFHPKRPMHILLHDAYMFCIID 455
Query: 174 RKAQFEMEPT 145
+ + T
Sbjct: 456 KSLPLPNDKT 465
>AK027675-1|BAB55287.1| 686|Homo sapiens protein ( Homo sapiens cDNA
FLJ14769 fis, clone NT2RP3004189, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 686
Score = 63.7 bits (148), Expect = 8e-10
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 11/250 (4%)
Frame = -3
Query: 861 LLSLQTKGKKQIQSCAISPNGELIVYSTESHTRMLKLDSDDESNVYLSKVI-LNGSITTC 685
LL L+TKG + I ISP G I YST S + +L+ + + N+ L +V + + +
Sbjct: 382 LLHLKTKGPENIICSCISPCGSWIAYSTVSRFFLYRLNYEHD-NISLKRVSKMPAFLRSA 440
Query: 684 SHFAFTEDS-KVLIVYNAGTISFLQVDPEAGVTVTQTINTKKHLSCKSILHFQISKKC-- 514
F+EDS K+ + N G + +Q+ + KHL + C
Sbjct: 441 LQILFSEDSTKLFVASNQGALHIVQLSG----------GSFKHLHAFQPQSGTVEAMCLL 490
Query: 513 --PSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
+ +L + T + ++ K+ + + T+P Y+ +AM + L++A+ D+
Sbjct: 491 AVSPDGNWLAASGTSAGVHVYNV--KQLKLHCTVPAYNFPVTAMAIAPNTNNLVIAHSDQ 548
Query: 339 KVVEYELFEKKFSDWPGSAMPP----VWYDTKQCVLSVHPHPSGQSVVFQHLRDLF-VLD 175
+V EY + +K+++DW + +W + + HP + H +F ++D
Sbjct: 549 QVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDTPITHISFHPKRPMHILLHDAYMFCIID 608
Query: 174 RKAQFEMEPT 145
+ + T
Sbjct: 609 KSLPLPNDKT 618
>AK027634-1|BAB55251.1| 686|Homo sapiens protein ( Homo sapiens cDNA
FLJ14728 fis, clone NT2RP3001857, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 686
Score = 63.7 bits (148), Expect = 8e-10
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 11/250 (4%)
Frame = -3
Query: 861 LLSLQTKGKKQIQSCAISPNGELIVYSTESHTRMLKLDSDDESNVYLSKVI-LNGSITTC 685
LL L+TKG + I ISP G I YST S + +L+ + + N+ L +V + + +
Sbjct: 382 LLHLKTKGPENIICSCISPCGSWIAYSTVSRFFLYRLNYEHD-NISLKRVSKMPAFLRSA 440
Query: 684 SHFAFTEDS-KVLIVYNAGTISFLQVDPEAGVTVTQTINTKKHLSCKSILHFQISKKC-- 514
F+EDS K+ + N G + +Q+ + KHL + C
Sbjct: 441 LQILFSEDSTKLFVASNQGALHIVQLSG----------GSFKHLHAFQPQSGTVEAMCLL 490
Query: 513 --PSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
+ +L + T + ++ K+ + + T+P Y+ +AM + L++A+ D+
Sbjct: 491 AVSPDGNWLAASGTSAGVHVYNV--KQLKLHCTVPAYNFPVTAMAIAPNTNNLVIAHSDQ 548
Query: 339 KVVEYELFEKKFSDWPGSAMPP----VWYDTKQCVLSVHPHPSGQSVVFQHLRDLF-VLD 175
+V EY + +K+++DW + +W + + HP + H +F ++D
Sbjct: 549 QVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDTPITHISFHPKRPMHILLHDAYMFCIID 608
Query: 174 RKAQFEMEPT 145
+ + T
Sbjct: 609 KSLPLPNDKT 618
>AK027419-1|BAB55100.1| 505|Homo sapiens protein ( Homo sapiens
cDNA FLJ14513 fis, clone NT2RM1000702, weakly similar to
PUTATIVE SERINE/THREONINE-PROTEIN KINASE PKWA (EC
2.7.1.-). ).
Length = 505
Score = 63.3 bits (147), Expect = 1e-09
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 11/250 (4%)
Frame = -3
Query: 861 LLSLQTKGKKQIQSCAISPNGELIVYSTESHTRMLKLDSDDESNVYLSKVI-LNGSITTC 685
LL L+TKG + I ISP G I YST S + +L+ + + N+ L +V + + +
Sbjct: 201 LLHLKTKGPENIICSCISPCGSWIAYSTVSRFFLYRLNYEHD-NISLKRVSKMPAFLRSA 259
Query: 684 SHFAFTEDS-KVLIVYNAGTISFLQVDPEAGVTVTQTINTKKHLSCKSILHFQISKKC-- 514
F+EDS K+ + N G + +Q+ + KHL + C
Sbjct: 260 LQILFSEDSTKLFVASNQGALHIVQLSG----------GSFKHLHAFQPQSGTVEAMCLL 309
Query: 513 --PSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
+ +L + T + ++ K+ + + T+P Y+ +AM + L++A+ D+
Sbjct: 310 AVSPDGNWLAASGTSAGVHVYNV--KQLKLHCTVPAYNFPVTAMAIAPNTNNLVIAHSDQ 367
Query: 339 KVVEYELFEKKFSDWPGSAMPP----VWYDTKQCVLSVHPHPSGQSVVFQHLRDLF-VLD 175
+V EY + +K+++DW + +W + + HP + H +F ++D
Sbjct: 368 QVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDTPITHISFHPKRPVHILLHDAYMFCIID 427
Query: 174 RKAQFEMEPT 145
+ + T
Sbjct: 428 KSLPLPNDKT 437
>AK027584-1|BAB55212.1| 139|Homo sapiens protein ( Homo sapiens
cDNA FLJ14678 fis, clone NT2RP2004226. ).
Length = 139
Score = 43.2 bits (97), Expect = 0.001
Identities = 23/112 (20%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = -3
Query: 444 KKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDRKVVEYELFEKKFSDWPGSAMPP--- 274
K+ + + T+P Y+ +AM + L++A+ D++V EY + +K+++DW +
Sbjct: 28 KQLKLHCTVPAYNFPVTAMAIAPNTNNLVIAHSDQQVFEYSIPDKQYTDWSRTVQKQGFH 87
Query: 273 -VWYDTKQCVLSVHPHPSGQSVVFQHLRDLFVLDRKAQFEMEPTKKKKSADA 121
+W + + HP + H +F + K+ K S+++
Sbjct: 88 HLWLQRDTPITHISFHPKRPMHILLHDAYMFCIIDKSLVSSSLLPPKSSSES 139
>AK027445-1|BAB55116.1| 475|Homo sapiens protein ( Homo sapiens
cDNA FLJ14539 fis, clone NT2RM2001345, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 475
Score = 42.3 bits (95), Expect = 0.002
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Frame = -3
Query: 444 KKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDRKVVEYELFEKKFSDWPGSAMPP--- 274
K+ + + T+P Y+ +AM + L++A+ D++V EY + +K+++DW +
Sbjct: 303 KQLKLHCTVPAYNFPVTAMAIAPNTNNLVIAHSDQQVFEYSIPDKQYTDWSRTVQKQGFH 362
Query: 273 -VWYDTKQCVLSVHPHPSGQSVVFQHLRDLF-VLDRKAQFEMEPT 145
+W + + HP + H +F ++D+ + T
Sbjct: 363 HLWLQRDTPITHISFHPKRPMHILLHDAYMFCIIDKSLPLPNDKT 407
>BC101514-1|AAI01515.1| 489|Homo sapiens leukocyte
immunoglobulin-like receptor, subfamily A (with TM
domain), member 1 protein.
Length = 489
Score = 33.1 bits (72), Expect = 1.3
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 239 TDSTHCFVSYHTGGMAEPGQSLNFFSNNSYSTTFLSTYATIKVSFSASTTMADGTQ*YFG 418
T CF HT G +EP L +Y LS + V+ + T+ +Q FG
Sbjct: 93 TGRYRCFYGSHTAGWSEPSDPLELVVTGAYIKPTLSALPSPVVTSGGNVTLHCVSQVAFG 152
Query: 419 NVI*C 433
+ I C
Sbjct: 153 SFILC 157
>BC093708-1|AAH93708.1| 489|Homo sapiens leukocyte
immunoglobulin-like receptor, subfamily A (with TM
domain), member 1 protein.
Length = 489
Score = 33.1 bits (72), Expect = 1.3
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 239 TDSTHCFVSYHTGGMAEPGQSLNFFSNNSYSTTFLSTYATIKVSFSASTTMADGTQ*YFG 418
T CF HT G +EP L +Y LS + V+ + T+ +Q FG
Sbjct: 93 TGRYRCFYGSHTAGWSEPSDPLELVVTGAYIKPTLSALPSPVVTSGGNVTLHCVSQVAFG 152
Query: 419 NVI*C 433
+ I C
Sbjct: 153 SFILC 157
>AF025530-1|AAB87664.1| 489|Homo sapiens leucocyte
immunoglobulin-like receptor-6a protein.
Length = 489
Score = 33.1 bits (72), Expect = 1.3
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 239 TDSTHCFVSYHTGGMAEPGQSLNFFSNNSYSTTFLSTYATIKVSFSASTTMADGTQ*YFG 418
T CF HT G +EP L +Y LS + V+ + T+ +Q FG
Sbjct: 93 TGRYRCFYGSHTAGWSEPSDPLELVVTGAYIKPTLSALPSPVVTSGGNVTLHCVSQVAFG 152
Query: 419 NVI*C 433
+ I C
Sbjct: 153 SFILC 157
>AF025529-1|AAB87663.1| 289|Homo sapiens leucocyte
immunoglobulin-like receptor-6b protein.
Length = 289
Score = 33.1 bits (72), Expect = 1.3
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 239 TDSTHCFVSYHTGGMAEPGQSLNFFSNNSYSTTFLSTYATIKVSFSASTTMADGTQ*YFG 418
T CF HT G +EP L +Y LS + V+ + T+ +Q FG
Sbjct: 93 TGRYRCFYGSHTAGWSEPSDPLELVVTGAYIKPTLSALPSPVVTSGGNVTLHCVSQVAFG 152
Query: 419 NVI*C 433
+ I C
Sbjct: 153 SFILC 157
>AF014924-1|AAC51886.1| 375|Homo sapiens immunoglobulin-like
transcript 6a protein.
Length = 375
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/87 (25%), Positives = 34/87 (39%)
Frame = +2
Query: 254 CFVSYHTGGMAEPGQSLNFFSNNSYSTTFLSTYATIKVSFSASTTMADGTQ*YFGNVI*C 433
C HT G++E L +YS LS + V+ + T+ +Q F I C
Sbjct: 98 CIYGSHTAGLSESSDPLELVVTGAYSKPTLSALPSPVVTSGGNVTIQCDSQVAFDGFILC 157
Query: 434 SNFFPICVHITISPCVSATTKYTLLLG 514
+ P + + P V+ K T G
Sbjct: 158 VSKKP-SLSVQPGPVVAPGEKLTFQCG 183
>AL035454-2|CAI42112.1| 836|Homo sapiens Crn, crooked neck-like 1
(Drosophila) protein.
Length = 836
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = -3
Query: 519 KCPSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
KCP NK++ V + + + + + K +E ++ +C ++ + AE ET I+ +DR
Sbjct: 590 KCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENC--TSWIKFAELET-ILGDIDR 646
Query: 339 KVVEYEL 319
YEL
Sbjct: 647 ARAIYEL 653
>AL035454-1|CAI42113.1| 848|Homo sapiens Crn, crooked neck-like 1
(Drosophila) protein.
Length = 848
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = -3
Query: 519 KCPSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
KCP NK++ V + + + + + K +E ++ +C ++ + AE ET I+ +DR
Sbjct: 602 KCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENC--TSWIKFAELET-ILGDIDR 658
Query: 339 KVVEYEL 319
YEL
Sbjct: 659 ARAIYEL 665
>AK023728-1|BAB14659.1| 512|Homo sapiens protein ( Homo sapiens
cDNA FLJ13666 fis, clone PLACE1011664, moderately
similar to CROOKED NECK PROTEIN. ).
Length = 512
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = -3
Query: 519 KCPSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
KCP NK++ V + + + + + K +E ++ +C ++ + AE ET I+ +DR
Sbjct: 266 KCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENC--TSWIKFAELET-ILGDIDR 322
Query: 339 KVVEYEL 319
YEL
Sbjct: 323 ARAIYEL 329
>AK023246-1|BAB14485.1| 564|Homo sapiens protein ( Homo sapiens
cDNA FLJ13184 fis, clone NT2RP3004206, moderately
similar to CROOKED NECK PROTEIN. ).
Length = 564
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = -3
Query: 519 KCPSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
KCP NK++ V + + + + + K +E ++ +C ++ + AE ET I+ +DR
Sbjct: 318 KCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENC--TSWIKFAELET-ILGDIDR 374
Query: 339 KVVEYEL 319
YEL
Sbjct: 375 ARAIYEL 381
>AK022908-1|BAB14303.1| 564|Homo sapiens protein ( Homo sapiens
cDNA FLJ12846 fis, clone NT2RP2003308, moderately
similar to CROOKED NECK PROTEIN. ).
Length = 564
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = -3
Query: 519 KCPSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
KCP NK++ V + + + + + K +E ++ +C ++ + AE ET I+ +DR
Sbjct: 318 KCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENC--TSWIKFAELET-ILGDIDR 374
Query: 339 KVVEYEL 319
YEL
Sbjct: 375 ARAIYEL 381
>AF318303-1|AAK01925.1| 848|Homo sapiens CGI-201 protein, type II
protein.
Length = 848
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = -3
Query: 519 KCPSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
KCP NK++ V + + + + + K +E ++ +C ++ + AE ET I+ +DR
Sbjct: 602 KCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENC--TSWIKFAELET-ILGDIDR 658
Query: 339 KVVEYEL 319
YEL
Sbjct: 659 ARAIYEL 665
>AF318302-1|AAK01924.1| 687|Homo sapiens CGI-201 protein, short
form protein.
Length = 687
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = -3
Query: 519 KCPSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
KCP NK++ V + + + + + K +E ++ +C ++ + AE ET I+ +DR
Sbjct: 441 KCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENC--TSWIKFAELET-ILGDIDR 497
Query: 339 KVVEYEL 319
YEL
Sbjct: 498 ARAIYEL 504
>AF255443-1|AAF65571.2| 836|Homo sapiens CGI-201 protein protein.
Length = 836
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = -3
Query: 519 KCPSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
KCP NK++ V + + + + + K +E ++ +C ++ + AE ET I+ +DR
Sbjct: 590 KCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENC--TSWIKFAELET-ILGDIDR 646
Query: 339 KVVEYEL 319
YEL
Sbjct: 647 ARAIYEL 653
>AF111802-1|AAL39004.1| 687|Homo sapiens MSTP021 protein.
Length = 687
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = -3
Query: 519 KCPSNKVYLVVADTQGDIVIWTQIGKKFEHYITLPKYHCVPSAMVVDAEKETLIVAYVDR 340
KCP NK++ V + + + + + K +E ++ +C ++ + AE ET I+ +DR
Sbjct: 441 KCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENC--TSWIKFAELET-ILGDIDR 497
Query: 339 KVVEYEL 319
YEL
Sbjct: 498 ARAIYEL 504
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,774,220
Number of Sequences: 237096
Number of extensions: 2870977
Number of successful extensions: 7241
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7230
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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