Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11g22
(800 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 356 2e-98
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 356 2e-98
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 356 2e-98
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 356 2e-98
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 356 2e-98
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 352 4e-97
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 290 1e-78
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 290 1e-78
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 198 2e-53
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 198 2e-53
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 64 2e-13
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 64 2e-13
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 62 8e-13
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 62 8e-13
AY075483-1|AAL68293.1| 313|Drosophila melanogaster RE39480p pro... 31 2.4
AE013599-905|AAF58912.1| 313|Drosophila melanogaster CG12926-PA... 31 2.4
BT025110-1|ABE73281.1| 320|Drosophila melanogaster IP10506p pro... 29 7.4
BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p pro... 29 7.4
AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-P... 29 7.4
AE014298-1708|AAF48109.2| 320|Drosophila melanogaster CG10352-P... 29 7.4
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 356 bits (875), Expect = 2e-98
Identities = 172/230 (74%), Positives = 192/230 (83%)
Frame = -3
Query: 759 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 580
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 579 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 400
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 399 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKI 220
IPGLTD +PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKI
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKI 177
Query: 219 QRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 70
QRL+TPVVLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 178 QRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 356 bits (875), Expect = 2e-98
Identities = 172/230 (74%), Positives = 192/230 (83%)
Frame = -3
Query: 759 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 580
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 579 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 400
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 399 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKI 220
IPGLTD +PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKI
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKI 177
Query: 219 QRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 70
QRL+TPVVLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 178 QRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 356 bits (875), Expect = 2e-98
Identities = 172/230 (74%), Positives = 192/230 (83%)
Frame = -3
Query: 759 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 580
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 579 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 400
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 399 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKI 220
IPGLTD +PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKI
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKI 177
Query: 219 QRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 70
QRL+TPVVLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 178 QRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 356 bits (875), Expect = 2e-98
Identities = 172/230 (74%), Positives = 192/230 (83%)
Frame = -3
Query: 759 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 580
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 579 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 400
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 399 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKI 220
IPGLTD +PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKI
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKI 177
Query: 219 QRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 70
QRL+TPVVLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 178 QRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 356 bits (875), Expect = 2e-98
Identities = 172/230 (74%), Positives = 192/230 (83%)
Frame = -3
Query: 759 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 580
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 579 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 400
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 399 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKI 220
IPGLTD +PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKI
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKI 177
Query: 219 QRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 70
QRL+TPVVLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 178 QRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 352 bits (865), Expect = 4e-97
Identities = 170/228 (74%), Positives = 190/228 (83%)
Frame = -3
Query: 753 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFP 574
LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFP
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFP 65
Query: 573 MKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIP 394
MKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IP
Sbjct: 66 MKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIP 125
Query: 393 GLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQR 214
GLTD +PRRLGPKRASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKIQR
Sbjct: 126 GLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQR 182
Query: 213 LVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 70
L+TPVVLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 183 LITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 230
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 290 bits (712), Expect = 1e-78
Identities = 142/199 (71%), Positives = 161/199 (80%)
Frame = -3
Query: 666 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 487
MG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 486 RKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKED 307
RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NLSKED
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKED 120
Query: 306 DVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEA 127
DVRR+VV+R LPA K+N K KAPKIQRL+TPVVLQ K + A
Sbjct: 121 DVRRFVVRRPLPA---KDNKKATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 177
Query: 126 EYAKLLAQRKKESKVRRQE 70
+YAKLL QRKKESK +R+E
Sbjct: 178 DYAKLLVQRKKESKAKREE 196
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 290 bits (712), Expect = 1e-78
Identities = 142/199 (71%), Positives = 161/199 (80%)
Frame = -3
Query: 666 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 487
MG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 486 RKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKED 307
RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+NLSKED
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKED 120
Query: 306 DVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEA 127
DVRR+VV+R LPA K+N K KAPKIQRL+TPVVLQ K + A
Sbjct: 121 DVRRFVVRRPLPA---KDNKKATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 177
Query: 126 EYAKLLAQRKKESKVRRQE 70
+YAKLL QRKKESK +R+E
Sbjct: 178 DYAKLLVQRKKESKAKREE 196
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 198 bits (484), Expect(2) = 2e-53
Identities = 106/179 (59%), Positives = 125/179 (69%)
Frame = -3
Query: 759 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 580
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 579 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 400
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS- 118
Query: 399 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 223
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 119 ---------PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
Score = 29.9 bits (64), Expect(2) = 2e-53
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 129 AEYAKLLAQRKKESKVRR 76
AEY KLL +RKKESK R
Sbjct: 165 AEYVKLLVKRKKESKANR 182
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 198 bits (484), Expect(2) = 2e-53
Identities = 106/179 (59%), Positives = 125/179 (69%)
Frame = -3
Query: 759 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 580
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 579 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 400
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS- 118
Query: 399 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 223
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 119 ---------PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
Score = 29.9 bits (64), Expect(2) = 2e-53
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 129 AEYAKLLAQRKKESKVRR 76
AEY KLL +RKKESK R
Sbjct: 165 AEYVKLLVKRKKESKANR 182
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 64.5 bits (150), Expect(2) = 2e-13
Identities = 44/110 (40%), Positives = 60/110 (54%)
Frame = -3
Query: 552 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNV 373
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 372 PRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 223
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 96
Score = 29.9 bits (64), Expect(2) = 2e-13
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 129 AEYAKLLAQRKKESKVRR 76
AEY KLL +RKKESK R
Sbjct: 100 AEYVKLLVKRKKESKANR 117
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 64.5 bits (150), Expect(2) = 2e-13
Identities = 44/110 (40%), Positives = 60/110 (54%)
Frame = -3
Query: 552 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNV 373
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 372 PRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 223
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 96
Score = 29.9 bits (64), Expect(2) = 2e-13
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 129 AEYAKLLAQRKKESKVRR 76
AEY KLL +RKKESK R
Sbjct: 100 AEYVKLLVKRKKESKANR 117
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 62.5 bits (145), Expect(2) = 8e-13
Identities = 43/108 (39%), Positives = 59/108 (54%)
Frame = -3
Query: 546 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 367
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 21 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 69
Query: 366 RLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 223
RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 70 RLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 110
Score = 29.9 bits (64), Expect(2) = 8e-13
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 129 AEYAKLLAQRKKESKVRR 76
AEY KLL +RKKESK R
Sbjct: 114 AEYVKLLVKRKKESKANR 131
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 62.5 bits (145), Expect(2) = 8e-13
Identities = 43/108 (39%), Positives = 59/108 (54%)
Frame = -3
Query: 546 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 367
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 366 RLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 223
RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 68 RLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 108
Score = 29.9 bits (64), Expect(2) = 8e-13
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 129 AEYAKLLAQRKKESKVRR 76
AEY KLL +RKKESK R
Sbjct: 112 AEYVKLLVKRKKESKANR 129
>AY075483-1|AAL68293.1| 313|Drosophila melanogaster RE39480p
protein.
Length = 313
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 348 ASKIRKLFNL-SKEDDVRRYVVKRVLPAKEGKEN 250
+ KIRK F++ SK D + +YV K LPA+ G N
Sbjct: 223 SEKIRKRFHIHSKLDSLYKYVPKECLPAEYGGSN 256
>AE013599-905|AAF58912.1| 313|Drosophila melanogaster CG12926-PA
protein.
Length = 313
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 348 ASKIRKLFNL-SKEDDVRRYVVKRVLPAKEGKEN 250
+ KIRK F++ SK D + +YV K LPA+ G N
Sbjct: 223 SEKIRKRFHIHSKLDSLYKYVPKECLPAEYGGSN 256
>BT025110-1|ABE73281.1| 320|Drosophila melanogaster IP10506p
protein.
Length = 320
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 386 VNPGISWAPLRTITRAKTERLASTIHPRTDLRFLS 490
V PG+ W PLR E LA H D+ F++
Sbjct: 33 VPPGVVWYPLRDFIPGSAEALAHLAHLGKDVTFVT 67
>BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p
protein.
Length = 638
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 504 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGP 355
P ER R + R I+ ++ A+V+V G +E DG RRL P
Sbjct: 271 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 321
>AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-PA
protein.
Length = 681
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 504 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGP 355
P ER R + R I+ ++ A+V+V G +E DG RRL P
Sbjct: 314 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 364
>AE014298-1708|AAF48109.2| 320|Drosophila melanogaster CG10352-PA
protein.
Length = 320
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 386 VNPGISWAPLRTITRAKTERLASTIHPRTDLRFLS 490
V PG+ W PLR E LA H D+ F++
Sbjct: 33 VPPGVVWYPLRDFIPGSAEALAHLAHLGKDVTFVT 67
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,067,296
Number of Sequences: 53049
Number of extensions: 777985
Number of successful extensions: 2301
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2277
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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