Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11f22
(872 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 28 0.32
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 26 1.3
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 25 3.0
AY146734-1|AAO12094.1| 176|Anopheles gambiae odorant-binding pr... 25 4.0
EF117201-1|ABL67438.1| 481|Anopheles gambiae serpin 17 protein. 24 5.3
AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450 pr... 24 5.3
AY017417-1|AAG54081.1| 383|Anopheles gambiae arrestin protein. 24 5.3
AJ304409-1|CAC39103.2| 383|Anopheles gambiae arrestin protein. 24 5.3
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 24 7.0
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 24 7.0
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 23 9.2
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 23 9.2
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 23 9.2
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 23 9.2
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 23 9.2
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 23 9.2
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 23 9.2
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 23 9.2
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 23 9.2
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 23 9.2
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 28.3 bits (60), Expect = 0.32
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = -2
Query: 505 RDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQ 326
RDAE+ + CE A+R TA L D + +A N Q +A + E R
Sbjct: 988 RDAESWSRICEAAKRITASLQQAWDD-ERAALAAHGNEQHFEEVADLEARRAEIRRARND 1046
Query: 325 KRSLGRSLKR 296
+R+ R R
Sbjct: 1047 RRNASRRAAR 1056
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 26.2 bits (55), Expect = 1.3
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -2
Query: 622 NDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDA-ETARQDCENARRETAQL 446
ND+ K +TQ L+ +LA A+++L A + I+ RD+ + RE A +
Sbjct: 470 NDIWKKETAVTQTLSGYKEELARADQALRSMAGKPILNGRDSVRKVLESFLQRGREYADI 529
Query: 445 AN 440
AN
Sbjct: 530 AN 531
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 25.0 bits (52), Expect = 3.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 505 RDAETARQDCENARRETAQL 446
RDA++ + CE A+R TAQL
Sbjct: 1051 RDADSWSRICEGAKRITAQL 1070
>AY146734-1|AAO12094.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP24 protein.
Length = 176
Score = 24.6 bits (51), Expect = 4.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 571 NADLAEANRSLILFANEMIVARRDAETARQDCENAR 464
NAD + SL +F + + AR +AE R+ +NAR
Sbjct: 26 NADNFKLYSSLFVFPSPLQGARLEAEHVRRIHQNAR 61
>EF117201-1|ABL67438.1| 481|Anopheles gambiae serpin 17 protein.
Length = 481
Score = 24.2 bits (50), Expect = 5.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 270 LKMTSLEPNRFRLRPSDRFC 329
+ +TSL F LRPS+R C
Sbjct: 1 MSVTSLVDGEFLLRPSNRAC 20
>AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450
protein.
Length = 507
Score = 24.2 bits (50), Expect = 5.3
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 686 QKPFL*FYGVRQFGLHYQLNHARFGNEHCVWGANTAGRP 802
QKP L + + QF Q HA + NE W G P
Sbjct: 39 QKPHLLYGHMEQF----QSKHASYINEELYWEFKNRGEP 73
>AY017417-1|AAG54081.1| 383|Anopheles gambiae arrestin protein.
Length = 383
Score = 24.2 bits (50), Expect = 5.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 334 RPQKRSLGRSLKRLGSNDVIFSSDYVPNS 248
+ Q + R LK+LGSN + F+ + PN+
Sbjct: 95 KEQTKLQERLLKKLGSNAIPFTFNISPNA 123
>AJ304409-1|CAC39103.2| 383|Anopheles gambiae arrestin protein.
Length = 383
Score = 24.2 bits (50), Expect = 5.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 334 RPQKRSLGRSLKRLGSNDVIFSSDYVPNS 248
+ Q + R LK+LGSN + F+ + PN+
Sbjct: 95 KEQTKLQERLLKKLGSNAIPFTFNISPNA 123
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 23.8 bits (49), Expect = 7.0
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 851 EHADQIQHHXPDSVAKQGDPLYLHPTHSAHYQ 756
+ ADQ HH +Q + H H H+Q
Sbjct: 634 QKADQTDHHQSQQPQQQQQHQHHHHHHHHHHQ 665
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.8 bits (49), Expect = 7.0
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 448 LANRMADIAQDVIAKPSNPQ 389
L NR+ DI+++ A PS+P+
Sbjct: 408 LYNRLRDISEETSALPSHPR 427
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 836 IQHHXPDSVAKQGDPLYLHPTHSAHY 759
+QHH +A P+ H AHY
Sbjct: 176 VQHHHAAPIAHYSAPIAHHAAPIAHY 201
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 836 IQHHXPDSVAKQGDPLYLHPTHSAHY 759
+QHH +A P+ H AHY
Sbjct: 176 VQHHHAAPIAHYAAPIAHHAAPIAHY 201
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 836 IQHHXPDSVAKQGDPLYLHPTHSAHY 759
+QHH +A P+ H AHY
Sbjct: 172 VQHHHAAPIAHYSAPIAHHAAPIAHY 197
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 836 IQHHXPDSVAKQGDPLYLHPTHSAHY 759
+QHH +A P+ H AHY
Sbjct: 184 VQHHHAAPIAHYSAPIAHHAAPIAHY 209
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 836 IQHHXPDSVAKQGDPLYLHPTHSAHY 759
+QHH +A P+ H AHY
Sbjct: 176 VQHHHAAPIAHYAAPIAHHAAPIAHY 201
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 836 IQHHXPDSVAKQGDPLYLHPTHSAHY 759
+QHH +A P+ H AHY
Sbjct: 184 VQHHHAAPIAHYSAPIAHHAAPIAHY 209
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 836 IQHHXPDSVAKQGDPLYLHPTHSAHY 759
+QHH +A P+ H AHY
Sbjct: 208 VQHHHAAPIAHYSAPIAHHAAPIAHY 233
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 836 IQHHXPDSVAKQGDPLYLHPTHSAHY 759
+QHH +A P+ H AHY
Sbjct: 176 VQHHHAAPIAHYAAPIAHHAAPIAHY 201
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 836 IQHHXPDSVAKQGDPLYLHPTHSAHY 759
+QHH +A P+ H AHY
Sbjct: 176 VQHHHAAPIAHYSAPIAHHAAPIAHY 201
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 836 IQHHXPDSVAKQGDPLYLHPTHSAHY 759
+QHH +A P+ H AHY
Sbjct: 184 VQHHHAAPIAHYSAPIAHHAAPIAHY 209
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 941,738
Number of Sequences: 2352
Number of extensions: 19372
Number of successful extensions: 63
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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