Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11f21
(806 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11451-1|AAA28918.1| 786|Drosophila melanogaster serine protein... 31 1.4
AY119618-1|AAM50272.1| 683|Drosophila melanogaster LD44584p pro... 31 1.4
AE014297-2154|AAF55277.1| 787|Drosophila melanogaster CG4316-PA... 31 1.4
BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p pro... 29 5.7
BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p pro... 29 5.7
AY069239-1|AAL39384.1| 688|Drosophila melanogaster GM01240p pro... 29 5.7
AE014296-140|AAN11452.1| 688|Drosophila melanogaster CG13900-PB... 29 5.7
AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA... 29 5.7
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 29 5.7
L27654-1|AAA69925.1| 192|Drosophila melanogaster phosphoglycero... 29 9.9
AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA ... 29 9.9
AE014297-116|AAF52115.2| 559|Drosophila melanogaster CG12586-PA... 29 9.9
>L11451-1|AAA28918.1| 786|Drosophila melanogaster serine proteinase
protein.
Length = 786
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -1
Query: 755 RTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTT 624
RT +P TT+R T T+ PT PT ATSSS + K T
Sbjct: 424 RTTTPTTTTRR--TTTNKPTRPYQRPTTATSSSSTSTTSSKTPT 465
>AY119618-1|AAM50272.1| 683|Drosophila melanogaster LD44584p
protein.
Length = 683
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -1
Query: 755 RTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTT 624
RT +P TT+R T T+ PT PT ATSSS + K T
Sbjct: 321 RTTTPTTTTRR--TTTNKPTRPYQRPTTATSSSSTSTTSSKTPT 362
>AE014297-2154|AAF55277.1| 787|Drosophila melanogaster CG4316-PA
protein.
Length = 787
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -1
Query: 755 RTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTT 624
RT +P TT+R T T+ PT PT ATSSS + K T
Sbjct: 425 RTTTPTTTTRR--TTTNKPTRPYQRPTTATSSSSTSTTSSKTPT 466
>BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p protein.
Length = 1227
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 128 LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 250
++ +++ +F RY+ AEN L IFA HP+ LL Y
Sbjct: 1010 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 1051
>BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p protein.
Length = 1227
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 128 LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 250
++ +++ +F RY+ AEN L IFA HP+ LL Y
Sbjct: 1010 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 1051
>AY069239-1|AAL39384.1| 688|Drosophila melanogaster GM01240p
protein.
Length = 688
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 128 LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 250
++ +++ +F RY+ AEN L IFA HP+ LL Y
Sbjct: 471 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 512
>AE014296-140|AAN11452.1| 688|Drosophila melanogaster CG13900-PB,
isoform B protein.
Length = 688
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 128 LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 250
++ +++ +F RY+ AEN L IFA HP+ LL Y
Sbjct: 471 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 512
>AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA,
isoform A protein.
Length = 1227
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 128 LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 250
++ +++ +F RY+ AEN L IFA HP+ LL Y
Sbjct: 1010 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 1051
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 29.5 bits (63), Expect = 5.7
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = -1
Query: 752 TASPL*TTKR*WT--CTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA 579
T+ P TT R T CT SPT+ T TS+S T + TT T + P
Sbjct: 536 TSRPTTTTPRSTTTTCTCSPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRST 595
Query: 578 *TTNT 564
TT+T
Sbjct: 596 TTTST 600
Score = 29.1 bits (62), Expect = 7.5
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -1
Query: 752 TASPL*TTKR*WT--CTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA 579
T+ P TT R T CTS PT+ T T++S T + TT P + + PT
Sbjct: 1112 TSRPTTTTPRSTTTPCTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPCPTTTPSASPTRT 1171
Query: 578 *TT 570
TT
Sbjct: 1172 TTT 1174
>L27654-1|AAA69925.1| 192|Drosophila melanogaster
phosphoglyceromutase protein.
Length = 192
Score = 28.7 bits (61), Expect = 9.9
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 667 QVPRSTRS*VGRRLRAPRSNQNCG-AILRGHEQRIQN*SG*KGRRLPNHEHPQRVHQLVR 491
QV R + + +LR P + G ++LR H Q G + R +P PQ H+
Sbjct: 96 QVRRGPGADLASQLRHPATTDGAGPSVLREHRQGSPLRRGSQARGVPPVRVPQADHRAHT 155
Query: 490 VVCEPRH 470
+ E RH
Sbjct: 156 ALLERRH 162
>AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA
protein.
Length = 1667
Score = 28.7 bits (61), Expect = 9.9
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = -3
Query: 756 EDSFPIVNDQEVMDVYLVANLKP-TRPNRC----YKFLAQHALRWEEDYVPHEVI 607
E +V+D +V VAN P T+P R ++F +H+L W E + EV+
Sbjct: 140 EAELTVVDDDDVPSTSQVANQHPPTKPPRSNNTDHQFDLEHSLTWLESLMGTEVV 194
>AE014297-116|AAF52115.2| 559|Drosophila melanogaster CG12586-PA
protein.
Length = 559
Score = 28.7 bits (61), Expect = 9.9
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = -1
Query: 734 TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA*TTNT 564
TTK T T++PTS PT T+++ G TT PT + + PT T T
Sbjct: 228 TTKTTTTPTTTPTS---TPTTTTTTTTTQTTGTSTTTTPTTTTPTTTTPTITTPTTT 281
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,784,195
Number of Sequences: 53049
Number of extensions: 745409
Number of successful extensions: 1856
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1856
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -