Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11f20
(826 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75913-1|CAA53512.1| 282|Homo sapiens gCIq-R protein. 72 3e-12
M69039-1|AAA73055.1| 278|Homo sapiens protein ( Human pre-mRNA ... 72 3e-12
L04636-1|AAA16315.1| 282|Homo sapiens splicing factor protein. 72 3e-12
DQ372108-1|ABC79624.1| 282|Homo sapiens complement component 1,... 72 3e-12
BT019899-1|AAV38702.1| 282|Homo sapiens complement component 1,... 72 3e-12
BT019898-1|AAV38701.1| 282|Homo sapiens complement component 1,... 72 3e-12
BC013731-1|AAH13731.1| 282|Homo sapiens complement component 1,... 72 3e-12
BC000435-1|AAH00435.1| 282|Homo sapiens complement component 1,... 72 3e-12
AF338439-1|AAK26580.1| 282|Homo sapiens gC1qR/p32 protein. 72 3e-12
AF275902-1|AAF78763.1| 197|Homo sapiens hyaluronan-binding prot... 72 3e-12
AB014567-1|BAA31642.1| 1111|Homo sapiens KIAA0667 protein protein. 32 2.9
>X75913-1|CAA53512.1| 282|Homo sapiens gCIq-R protein.
Length = 282
Score = 71.7 bits (168), Expect = 3e-12
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Frame = -2
Query: 786 TFNVNHTV----DSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDT---TLGFTCSYLQD 628
TFN+N+++ D ++ Q +++ E+ S P F V++++ D L C Y +D
Sbjct: 132 TFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVLDCHYPED 191
Query: 627 PPAASADEYNDVFGIDEITLY---KGEWNDKVYAVAXXXXXXXXXXXLMNLLEEKGISNE 457
+ +D+F I E++ + EW D Y + LM+ L ++G+ N
Sbjct: 192 EVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLNTDSLDWALYDHLMDFLADRGVDNT 251
Query: 456 FVQKLSDFSTAYEHTAYINLLESISKF 376
F +L + STA EH YI LE + F
Sbjct: 252 FADELVELSTALEHQEYITFLEDLKSF 278
>M69039-1|AAA73055.1| 278|Homo sapiens protein ( Human pre-mRNA
splicing factor SF2p32, complete sequence. ).
Length = 278
Score = 71.7 bits (168), Expect = 3e-12
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Frame = -2
Query: 786 TFNVNHTV----DSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDT---TLGFTCSYLQD 628
TFN+N+++ D ++ Q +++ E+ S P F V++++ D L C Y +D
Sbjct: 128 TFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVLDCHYPED 187
Query: 627 PPAASADEYNDVFGIDEITLY---KGEWNDKVYAVAXXXXXXXXXXXLMNLLEEKGISNE 457
+ +D+F I E++ + EW D Y + LM+ L ++G+ N
Sbjct: 188 EVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLNTDSLDWALYDHLMDFLADRGVDNT 247
Query: 456 FVQKLSDFSTAYEHTAYINLLESISKF 376
F +L + STA EH YI LE + F
Sbjct: 248 FADELVELSTALEHQEYITFLEDLKSF 274
>L04636-1|AAA16315.1| 282|Homo sapiens splicing factor protein.
Length = 282
Score = 71.7 bits (168), Expect = 3e-12
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Frame = -2
Query: 786 TFNVNHTV----DSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDT---TLGFTCSYLQD 628
TFN+N+++ D ++ Q +++ E+ S P F V++++ D L C Y +D
Sbjct: 132 TFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVLDCHYPED 191
Query: 627 PPAASADEYNDVFGIDEITLY---KGEWNDKVYAVAXXXXXXXXXXXLMNLLEEKGISNE 457
+ +D+F I E++ + EW D Y + LM+ L ++G+ N
Sbjct: 192 EVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLNTDSLDWALYDHLMDFLADRGVDNT 251
Query: 456 FVQKLSDFSTAYEHTAYINLLESISKF 376
F +L + STA EH YI LE + F
Sbjct: 252 FADELVELSTALEHQEYITFLEDLKSF 278
>DQ372108-1|ABC79624.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 71.7 bits (168), Expect = 3e-12
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Frame = -2
Query: 786 TFNVNHTV----DSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDT---TLGFTCSYLQD 628
TFN+N+++ D ++ Q +++ E+ S P F V++++ D L C Y +D
Sbjct: 132 TFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVLDCHYPED 191
Query: 627 PPAASADEYNDVFGIDEITLY---KGEWNDKVYAVAXXXXXXXXXXXLMNLLEEKGISNE 457
+ +D+F I E++ + EW D Y + LM+ L ++G+ N
Sbjct: 192 EVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLNTDSLDWALYDHLMDFLADRGVDNT 251
Query: 456 FVQKLSDFSTAYEHTAYINLLESISKF 376
F +L + STA EH YI LE + F
Sbjct: 252 FADELVELSTALEHQEYITFLEDLKSF 278
>BT019899-1|AAV38702.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 71.7 bits (168), Expect = 3e-12
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Frame = -2
Query: 786 TFNVNHTV----DSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDT---TLGFTCSYLQD 628
TFN+N+++ D ++ Q +++ E+ S P F V++++ D L C Y +D
Sbjct: 132 TFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVLDCHYPED 191
Query: 627 PPAASADEYNDVFGIDEITLY---KGEWNDKVYAVAXXXXXXXXXXXLMNLLEEKGISNE 457
+ +D+F I E++ + EW D Y + LM+ L ++G+ N
Sbjct: 192 EVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLNTDSLDWALYDHLMDFLADRGVDNT 251
Query: 456 FVQKLSDFSTAYEHTAYINLLESISKF 376
F +L + STA EH YI LE + F
Sbjct: 252 FADELVELSTALEHQEYITFLEDLKSF 278
>BT019898-1|AAV38701.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 71.7 bits (168), Expect = 3e-12
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Frame = -2
Query: 786 TFNVNHTV----DSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDT---TLGFTCSYLQD 628
TFN+N+++ D ++ Q +++ E+ S P F V++++ D L C Y +D
Sbjct: 132 TFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVLDCHYPED 191
Query: 627 PPAASADEYNDVFGIDEITLY---KGEWNDKVYAVAXXXXXXXXXXXLMNLLEEKGISNE 457
+ +D+F I E++ + EW D Y + LM+ L ++G+ N
Sbjct: 192 EVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLNTDSLDWALYDHLMDFLADRGVDNT 251
Query: 456 FVQKLSDFSTAYEHTAYINLLESISKF 376
F +L + STA EH YI LE + F
Sbjct: 252 FADELVELSTALEHQEYITFLEDLKSF 278
>BC013731-1|AAH13731.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 71.7 bits (168), Expect = 3e-12
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Frame = -2
Query: 786 TFNVNHTV----DSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDT---TLGFTCSYLQD 628
TFN+N+++ D ++ Q +++ E+ S P F V++++ D L C Y +D
Sbjct: 132 TFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVLDCHYPED 191
Query: 627 PPAASADEYNDVFGIDEITLY---KGEWNDKVYAVAXXXXXXXXXXXLMNLLEEKGISNE 457
+ +D+F I E++ + EW D Y + LM+ L ++G+ N
Sbjct: 192 EVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLNTDSLDWALYDHLMDFLADRGVDNT 251
Query: 456 FVQKLSDFSTAYEHTAYINLLESISKF 376
F +L + STA EH YI LE + F
Sbjct: 252 FADELVELSTALEHQEYITFLEDLKSF 278
>BC000435-1|AAH00435.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 71.7 bits (168), Expect = 3e-12
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Frame = -2
Query: 786 TFNVNHTV----DSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDT---TLGFTCSYLQD 628
TFN+N+++ D ++ Q +++ E+ S P F V++++ D L C Y +D
Sbjct: 132 TFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVLDCHYPED 191
Query: 627 PPAASADEYNDVFGIDEITLY---KGEWNDKVYAVAXXXXXXXXXXXLMNLLEEKGISNE 457
+ +D+F I E++ + EW D Y + LM+ L ++G+ N
Sbjct: 192 EVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLNTDSLDWALYDHLMDFLADRGVDNT 251
Query: 456 FVQKLSDFSTAYEHTAYINLLESISKF 376
F +L + STA EH YI LE + F
Sbjct: 252 FADELVELSTALEHQEYITFLEDLKSF 278
>AF338439-1|AAK26580.1| 282|Homo sapiens gC1qR/p32 protein.
Length = 282
Score = 71.7 bits (168), Expect = 3e-12
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Frame = -2
Query: 786 TFNVNHTV----DSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDT---TLGFTCSYLQD 628
TFN+N+++ D ++ Q +++ E+ S P F V++++ D L C Y +D
Sbjct: 132 TFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVLDCHYPED 191
Query: 627 PPAASADEYNDVFGIDEITLY---KGEWNDKVYAVAXXXXXXXXXXXLMNLLEEKGISNE 457
+ +D+F I E++ + EW D Y + LM+ L ++G+ N
Sbjct: 192 EVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLNTDSLDWALYDHLMDFLADRGVDNT 251
Query: 456 FVQKLSDFSTAYEHTAYINLLESISKF 376
F +L + STA EH YI LE + F
Sbjct: 252 FADELVELSTALEHQEYITFLEDLKSF 278
>AF275902-1|AAF78763.1| 197|Homo sapiens hyaluronan-binding protein
precursor protein.
Length = 197
Score = 71.7 bits (168), Expect = 3e-12
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Frame = -2
Query: 786 TFNVNHTV----DSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDT---TLGFTCSYLQD 628
TFN+N+++ D ++ Q +++ E+ S P F V++++ D L C Y +D
Sbjct: 47 TFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVLDCHYPED 106
Query: 627 PPAASADEYNDVFGIDEITLY---KGEWNDKVYAVAXXXXXXXXXXXLMNLLEEKGISNE 457
+ +D+F I E++ + EW D Y + LM+ L ++G+ N
Sbjct: 107 EVGQEDEAESDIFSIREVSFQSTGESEWKDTNYTLNTDSLDWALYDHLMDFLADRGVDNT 166
Query: 456 FVQKLSDFSTAYEHTAYINLLESISKF 376
F +L + STA EH YI LE + F
Sbjct: 167 FADELVELSTALEHQEYITFLEDLKSF 193
>AB014567-1|BAA31642.1| 1111|Homo sapiens KIAA0667 protein protein.
Length = 1111
Score = 31.9 bits (69), Expect = 2.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 774 NHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVD 679
N+ DSD+ E ++TE EFSE S+ ++ D
Sbjct: 212 NYNYDSDEDEEQMETEDSEFSEQESEDEYSDD 243
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,969,697
Number of Sequences: 237096
Number of extensions: 2034704
Number of successful extensions: 5526
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5516
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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