Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11f14
(182 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein. 84 7e-19
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 28 0.034
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 25 0.24
AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 22 2.3
AY330183-1|AAQ16289.1| 190|Anopheles gambiae odorant-binding pr... 21 3.9
AJ618925-1|CAF02004.1| 204|Anopheles gambiae odorant-binding pr... 21 3.9
AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram nega... 21 6.9
AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram nega... 21 6.9
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 21 6.9
AY341191-1|AAR13755.1| 191|Anopheles gambiae GNBP B1 protein. 20 9.1
AY341190-1|AAR13754.1| 191|Anopheles gambiae GNBP B1 protein. 20 9.1
AY341189-1|AAR13753.1| 191|Anopheles gambiae GNBP B1 protein. 20 9.1
AY341188-1|AAR13752.1| 191|Anopheles gambiae GNBP B1 protein. 20 9.1
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 20 9.1
>L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein.
Length = 229
Score = 83.8 bits (198), Expect = 7e-19
Identities = 37/54 (68%), Positives = 45/54 (83%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54
Score = 83.8 bits (198), Expect = 7e-19
Identities = 37/54 (68%), Positives = 45/54 (83%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
Score = 83.8 bits (198), Expect = 7e-19
Identities = 37/54 (68%), Positives = 45/54 (83%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 206
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 28.3 bits (60), Expect = 0.034
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 156 YSSKH*RAKPLPP-KRNPQRRWPISSKKLPIKKVCP*INKDLXLRANXW 13
Y + H + +PP +RNP+RR P S + P + P + R W
Sbjct: 240 YKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPTSW 288
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 25.4 bits (53), Expect = 0.24
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 178 SNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVD-QQRLXFAG 23
+ +VK ++T+ + I ETE A+ DL+ +I EG V+ + F+G
Sbjct: 339 AGNVKSLGQMETVEIRFIDEETEAADVERDLRNQITGLEGYKVEVTMKTSFSG 391
>AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein
protein.
Length = 257
Score = 22.2 bits (45), Expect = 2.3
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -3
Query: 138 RAKPLPPKRNPQRRWPISSKKL-PIKKVC 55
R P+PP ++ QRR SS + + VC
Sbjct: 63 RMPPVPPPKHSQRRRRSSSPRTRQFRSVC 91
>AY330183-1|AAQ16289.1| 190|Anopheles gambiae odorant-binding
protein AgamOBP57 protein.
Length = 190
Score = 21.4 bits (43), Expect = 3.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 128 GFARQCFDE 154
GF +QCFDE
Sbjct: 112 GFIQQCFDE 120
>AJ618925-1|CAF02004.1| 204|Anopheles gambiae odorant-binding
protein OBP14426 protein.
Length = 204
Score = 21.4 bits (43), Expect = 3.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 128 GFARQCFDE 154
GF +QCFDE
Sbjct: 126 GFIQQCFDE 134
>AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram
negative bacteria bindingprotein protein.
Length = 395
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 126 LPPKRNPQRRWPISSK 79
L PKRN WP S +
Sbjct: 196 LLPKRNAYGTWPASGE 211
>AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram
negative bacteria bindingprotein protein.
Length = 395
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 126 LPPKRNPQRRWPISSK 79
L PKRN WP S +
Sbjct: 196 LLPKRNAYGTWPASGE 211
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 169 VKMQIFIKTLTGKTITAETEPAE 101
V Q+ + L G + ET+P E
Sbjct: 380 VGYQVVLSHLRGSRVPPETDPVE 402
>AY341191-1|AAR13755.1| 191|Anopheles gambiae GNBP B1 protein.
Length = 191
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 126 LPPKRNPQRRWPIS 85
L PKRN WP S
Sbjct: 178 LLPKRNAYGTWPAS 191
>AY341190-1|AAR13754.1| 191|Anopheles gambiae GNBP B1 protein.
Length = 191
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 126 LPPKRNPQRRWPIS 85
L PKRN WP S
Sbjct: 178 LLPKRNAYGTWPAS 191
>AY341189-1|AAR13753.1| 191|Anopheles gambiae GNBP B1 protein.
Length = 191
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 126 LPPKRNPQRRWPIS 85
L PKRN WP S
Sbjct: 178 LLPKRNAYGTWPAS 191
>AY341188-1|AAR13752.1| 191|Anopheles gambiae GNBP B1 protein.
Length = 191
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 126 LPPKRNPQRRWPIS 85
L PKRN WP S
Sbjct: 178 LLPKRNAYGTWPAS 191
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 20.2 bits (40), Expect = 9.1
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -2
Query: 178 SNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV 56
+ +VK ++T+ + AET+ ++ DL+ + +GV
Sbjct: 326 NGTVKTLGQMETVEIRYFDAETQTSDVEKDLRDLFTELDGV 366
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,833
Number of Sequences: 2352
Number of extensions: 2460
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 39
effective length of database: 472,251
effective search space used: 9917271
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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