Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11f14
(182 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 81 1e-16
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 81 1e-16
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 81 1e-16
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 81 1e-16
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 81 1e-16
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 62 7e-11
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 57 2e-09
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 52 5e-08
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 50 2e-07
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 50 2e-07
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 41 1e-04
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 36 0.005
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 32 0.062
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 31 0.14
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 31 0.14
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 0.44
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical pr... 27 2.3
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 27 2.3
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 27 2.3
Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical pr... 25 7.1
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 25 7.1
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 25 7.1
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 25 9.4
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 25 9.4
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 206
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 282
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358
Score = 78.2 bits (184), Expect = 7e-16
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTL GKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 434
Score = 72.1 bits (169), Expect = 5e-14
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAG 23
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 206
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 282
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 510
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 586
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 662
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 738
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 814
Score = 78.2 bits (184), Expect = 7e-16
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTL GKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 434
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 206
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 282
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 358
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 434
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 510
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 586
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 662
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 738
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 814
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 80.6 bits (190), Expect = 1e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRL FAGK LED +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 61.7 bits (143), Expect = 7e-11
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
M I +KTLTGK I + EP + V +K+K+ +KEG+P QQRL FAGK + D K
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDK 54
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 56.8 bits (131), Expect = 2e-09
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVP 53
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 52.0 bits (119), Expect = 5e-08
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = -2
Query: 166 KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDSK 2
K+ + +KTL GKTI + +TV LK K+ +K GVP DQQRL F LE+ +
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDR 214
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -2
Query: 175 NSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV 56
+S M + +KT TGKTIT E ++K ++ DK+GV
Sbjct: 55 DSKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 50.4 bits (115), Expect = 2e-07
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = -2
Query: 157 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDS 5
+F+KTL +T+ E E V +KQKI EG+P ++QRL +AG+ LEDS
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS 51
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 50.4 bits (115), Expect = 2e-07
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = -2
Query: 157 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDS 5
+F+KTL +T+ E E V +KQKI EG+P ++QRL +AG+ LEDS
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS 51
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 40.7 bits (91), Expect = 1e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = -2
Query: 157 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGK 20
+F+KTL +T+ E E V +KQKI EG+P ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 35.5 bits (78), Expect = 0.005
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = -2
Query: 166 KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLED 8
+ QIF+K L G + + +TV D+K I + +P L F+GK LED
Sbjct: 153 EFQIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLED 204
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 31.9 bits (69), Expect = 0.062
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEG--VPVDQQRLXFAGKXLEDS 5
+ + +TLT E +T+A++K +A ++G + Q+L + GK L+DS
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDS 106
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 30.7 bits (66), Expect = 0.14
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -2
Query: 142 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDS 5
+ G + + +++LKQ+I D+ G+PV +Q+L G ++D+
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDN 629
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 30.7 bits (66), Expect = 0.14
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -2
Query: 142 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFAGKXLEDS 5
+ G + + +++LKQ+I D+ G+PV +Q+L G ++D+
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDN 629
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 29.1 bits (62), Expect = 0.44
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 151 IKTLTGKTITAETEPAETVADLKQKIADKEGVPV 50
I TL G+TI P E +A K+ EG+P+
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMPM 312
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 148 KTLTGKTITAETEPAETVADLKQKIADKEGVP 53
+ L G + A T+P + V D +++ KEGVP
Sbjct: 812 QVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical
protein K08F4.5 protein.
Length = 215
Score = 26.6 bits (56), Expect = 2.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 181 RSNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVP 53
+ + K IKT T + TA PAE V + K++ KE VP
Sbjct: 37 KEDKTKAMSAIKTTTMGSTTANMHPAEPVVEKKEE--PKEKVP 77
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 148 KTLTGKTITAETEPAETVADLKQKIADKEGVP 53
+ L G + A T+P + V D +++ KEGVP
Sbjct: 812 QVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 26.6 bits (56), Expect = 2.3
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV 56
M + IKT TGK IT E + +K ++ DK+GV
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 166 KMQIFIKTLTGKTIT 122
++ +F+KT TGKTIT
Sbjct: 180 EIDVFVKTYTGKTIT 194
>Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical
protein C09F9.3 protein.
Length = 800
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 152 HQNIDGQNHYRRNGTRRDG 96
H+NI+G H NGT +G
Sbjct: 725 HRNINGHGHMNGNGTHTNG 743
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 159 KYSSKH*RAKPLPPKRNPQRRWPISSKKLPIKKVCP*INKD 37
K SK P PK+N Q + S KLP K P KD
Sbjct: 348 KTVSKALSHSPKSPKKNSQEKSAPPSPKLPPKTTAPTPTKD 388
>Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical
protein C06G8.4 protein.
Length = 318
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 71 GNFLLEIGHRLCGFRFGGNGFARQCFDEYLHFYT 172
G +L + + C G GF F YLHF+T
Sbjct: 70 GKSMLYVSYGYCSLL--GEGFCFNIFAAYLHFHT 101
>Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical
protein C04G2.6 protein.
Length = 1029
Score = 25.0 bits (52), Expect = 7.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 98 RLCGFRFGGNGFARQCFDEYL 160
++ + GNG +Q FDEYL
Sbjct: 217 QMAAYESSGNGNEKQIFDEYL 237
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV 56
+Q+ I + TGK++ E E + + D+EGV
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGV 1184
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 163 MQIFIKTLTGKTITAETEPAETVADLKQK 77
M + IKT TGKTIT E P +++ K
Sbjct: 1 MLLSIKTSTGKTITVEA-PKSVKTEVRYK 28
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 24.6 bits (51), Expect = 9.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 148 KTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFA 26
+TLTG I ++EP A K + E P + QR+ A
Sbjct: 544 QTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 24.6 bits (51), Expect = 9.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 148 KTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLXFA 26
+TLTG I ++EP A K + E P + QR+ A
Sbjct: 544 QTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,071,690
Number of Sequences: 27780
Number of extensions: 64359
Number of successful extensions: 202
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 12,740,198
effective HSP length: 41
effective length of database: 11,601,218
effective search space used: 220423142
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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