Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11f10
         (235 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   1.1  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   1.9  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    22   3.3  
AY752908-1|AAV30082.1|  103|Anopheles gambiae peroxidase 13B pro...    21   4.4  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       21   5.8  
AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    21   7.7  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 53  GSKDCTRLSVCGADGTGELGNADRAAWL 136
           GSK  T  +    D T ELG  ++  WL
Sbjct: 57  GSKHHTHCTGLSRDSTRELGRNNQLLWL 84


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +2

Query: 53  GSKDCTRLSVCGADGTGELGNADRAAWLGLSAK 151
           G+K     S C   GTG  G+     W   SA+
Sbjct: 14  GNKSTAGTSSCCPAGTGLNGSGTEPGWSATSAE 46


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 15  PFRSRGCRRLDRSGRKIVQDCPFA 86
           P   +GCR +  + R I Q C  A
Sbjct: 533 PVHKKGCRSIVSNYRGITQTCATA 556


>AY752908-1|AAV30082.1|  103|Anopheles gambiae peroxidase 13B
          protein.
          Length = 103

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 22 GREVVEDLTARVERLYKTV 78
          GRE+  ++ AR+ R+Y  V
Sbjct: 43 GREIPPEVIARLRRIYAHV 61


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 71  RLSVCGADGTGELGNADRAAWLGLS 145
           ++S+C   G G  G   R  W G S
Sbjct: 150 QVSLCECIGRGRYGEVWRGIWHGES 174


>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
           protein.
          Length = 700

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
 Frame = -3

Query: 143 TALTKLHD--QHSRALLFRPPRKRTVLYNLSTRAVKS 39
           T   K H   QH    LF P    T+ Y+L  R + S
Sbjct: 3   TLTQKFHGLLQHPLEPLFLPKNDGTLFYDLPERFLTS 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,655
Number of Sequences: 2352
Number of extensions: 4233
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11041875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)