Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11e21
         (862 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364550-3|AAK52059.1|  518|Drosophila melanogaster envelope pro...    30   4.7  
AY060474-1|AAL25513.1|  133|Drosophila melanogaster SD06722p pro...    29   8.2  

>AF364550-3|AAK52059.1|  518|Drosophila melanogaster envelope
           protein protein.
          Length = 518

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -1

Query: 775 NMYRTLLLSTLCYLFALLILYFC*YSMYKYKG 680
           N Y TL + TL  L A++IL    Y +YKYKG
Sbjct: 444 NTYNTLQIITLTIL-AIIILTLILYFIYKYKG 474


>AY060474-1|AAL25513.1|  133|Drosophila melanogaster SD06722p
           protein.
          Length = 133

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 468 YLYYDVIGSVMEITFKTKLNSHTHSSEPMMKKFETNL--NKILRKNFIIL 611
           YLY  +  S++  T K   N  T  S  + + FE+NL  NKIL +  +++
Sbjct: 82  YLYIYIYISIVICTLKGSNNDQTQLSCIIRRMFESNLCFNKILYQTIVLI 131


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,029,129
Number of Sequences: 53049
Number of extensions: 503189
Number of successful extensions: 615
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)