Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11e18
         (282 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   0.70 
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    24   1.2  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   2.8  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       22   3.8  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            22   3.8  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    21   6.6  
AY344822-1|AAR02433.1|  257|Anopheles gambiae CP5039 protein.          21   6.6  
AY344821-1|AAR02432.1|  257|Anopheles gambiae CP5039 protein.          21   6.6  
AY344820-1|AAR02431.1|  257|Anopheles gambiae CP5039 protein.          21   6.6  
AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.          21   6.6  
AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.          21   6.6  
AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.          21   6.6  
AY344816-1|AAR02427.1|  257|Anopheles gambiae CP5039 protein.          21   6.6  
AY344815-1|AAR02426.1|  257|Anopheles gambiae CP5039 protein.          21   6.6  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    21   8.7  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 132 GPKSAAKHGHGSVGK 88
           GP+ A +H H SVGK
Sbjct: 73  GPRPAVRHLHSSVGK 87


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 20  CNYQLSHILFCITIQRC 70
           C Y  S++L C+++ RC
Sbjct: 160 CLYLSSNVLVCVSLDRC 176


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -3

Query: 160 MAIVWPLWCWTEISCKTRTWKCWKV*NT 77
           + + W +    E+  + + +KCWKV +T
Sbjct: 259 LKVGWSICHIREVMEEQKCYKCWKVGHT 286


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +2

Query: 149 NNRHCNTSHLQLHCNFSNMYYK 214
           + +HC    +Q  C F++ +Y+
Sbjct: 180 SEQHCCPQCVQSQCKFNDQFYR 201


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 127 RSNTTTAKQSPLQHIAPSITL 189
           R+N T+   + LQ +AP+IT+
Sbjct: 538 RNNITSLTYANLQFLAPAITV 558


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 193 FFKYVL*MYFTSRFLSALGTSNT 261
           FFK  L    +S +L+ALG S+T
Sbjct: 145 FFKTKLRKLSSSYYLAALGLSDT 167


>AY344822-1|AAR02433.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 133 WTEISCKTRTWKCWK 89
           ++ I    + WKCWK
Sbjct: 37  YSRIQETDQAWKCWK 51


>AY344821-1|AAR02432.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 133 WTEISCKTRTWKCWK 89
           ++ I    + WKCWK
Sbjct: 37  YSRIQETDQAWKCWK 51


>AY344820-1|AAR02431.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 133 WTEISCKTRTWKCWK 89
           ++ I    + WKCWK
Sbjct: 37  YSRIQETDQAWKCWK 51


>AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 133 WTEISCKTRTWKCWK 89
           ++ I    + WKCWK
Sbjct: 37  YSRIQETDQAWKCWK 51


>AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 133 WTEISCKTRTWKCWK 89
           ++ I    + WKCWK
Sbjct: 37  YSRIQETDQAWKCWK 51


>AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 133 WTEISCKTRTWKCWK 89
           ++ I    + WKCWK
Sbjct: 37  YSRIQETDQAWKCWK 51


>AY344816-1|AAR02427.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 133 WTEISCKTRTWKCWK 89
           ++ I    + WKCWK
Sbjct: 37  YSRIQETDQAWKCWK 51


>AY344815-1|AAR02426.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 133 WTEISCKTRTWKCWK 89
           ++ I    + WKCWK
Sbjct: 37  YSRIQETDQAWKCWK 51


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = -3

Query: 160 MAIVWPLWCWTEISCKTRTWKCWKV 86
           + + W +    E + + + +KCWK+
Sbjct: 312 LKVGWCVCSLREATVQVKCFKCWKL 336


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,429
Number of Sequences: 2352
Number of extensions: 6513
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 16515522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)