Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11e18
(282 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY128492-1|AAM75085.1| 387|Drosophila melanogaster RH41996p pro... 29 0.88
AE014298-1306|AAF46466.1| 387|Drosophila melanogaster CG12120-P... 29 0.88
AE014297-3155|AAF55996.2| 2059|Drosophila melanogaster CG12499-P... 29 0.88
M27699-1|AAA28842.1| 1462|Drosophila melanogaster protein ( D.me... 28 1.5
BT001531-1|AAN71286.1| 1461|Drosophila melanogaster RE06719p pro... 28 1.5
AE014296-2171|AAO41254.1| 1461|Drosophila melanogaster CG10975-P... 28 1.5
AE014296-2170|AAF49892.2| 1462|Drosophila melanogaster CG10975-P... 28 1.5
BT025131-1|ABE73302.1| 314|Drosophila melanogaster IP07320p pro... 27 2.7
AY051977-1|AAK93401.1| 931|Drosophila melanogaster LD44526p pro... 27 2.7
AY032851-1|AAK51129.1| 960|Drosophila melanogaster Cornetto pro... 27 2.7
AE014296-1202|AAF50605.2| 960|Drosophila melanogaster CG32386-P... 27 2.7
AL138972-2|CAB72285.1| 907|Drosophila melanogaster EG:BACR25B3.... 27 3.6
AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan pro... 27 3.6
AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB... 27 3.6
AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD... 27 3.6
AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA... 27 3.6
AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE... 27 3.6
AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC... 27 3.6
AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF... 27 3.6
AE014297-4158|AAF56734.3| 3298|Drosophila melanogaster CG18437-P... 26 6.2
AY553965-1|AAS90559.1| 748|Drosophila melanogaster thisbe protein. 26 8.2
AY094754-1|AAM11107.1| 46|Drosophila melanogaster GM07804p pro... 26 8.2
AE014134-915|AAS64642.1| 1712|Drosophila melanogaster CG11020-PB... 26 8.2
AE013599-1345|AAF58621.2| 748|Drosophila melanogaster CG12443-P... 26 8.2
>AY128492-1|AAM75085.1| 387|Drosophila melanogaster RH41996p
protein.
Length = 387
Score = 29.1 bits (62), Expect = 0.88
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +2
Query: 77 CILNFPTLPCP---CFAADFGPTPQRPNNRHCNTSHLQL 184
C +NF L P C+ + P+P R N H N + L
Sbjct: 243 CSINFTFLADPRQMCYNVEMAPSPDRKNESHLNIKEVPL 281
>AE014298-1306|AAF46466.1| 387|Drosophila melanogaster CG12120-PA
protein.
Length = 387
Score = 29.1 bits (62), Expect = 0.88
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +2
Query: 77 CILNFPTLPCP---CFAADFGPTPQRPNNRHCNTSHLQL 184
C +NF L P C+ + P+P R N H N + L
Sbjct: 243 CSINFTFLADPRQMCYNVEMAPSPDRKNESHLNIKEVPL 281
>AE014297-3155|AAF55996.2| 2059|Drosophila melanogaster CG12499-PA
protein.
Length = 2059
Score = 29.1 bits (62), Expect = 0.88
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 104 MEVLESLEYTSDNVELLCKKVCVIVDNYNQVL 9
+ VLESL T D V LLCK+ V+ +Q+L
Sbjct: 613 VNVLESLSITLDLVMLLCKENRAFVNKTSQIL 644
>M27699-1|AAA28842.1| 1462|Drosophila melanogaster protein (
D.melanogaster proteintyrosine phosphatase (DPTP) mRNA,
complete cds. ).
Length = 1462
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 227 DVKYIYNTYLKNYSVIEGAMCCNGDCLAVVVLDRNQLQNTD-MEVLESLEYTSDNV 63
D KY+ YL S G +CC L + D +L + + + + E SDNV
Sbjct: 559 DSKYVLKLYLPKISERNGPICCYRLYLVRINNDNKELPDPEKLNIATYQEVHSDNV 614
>BT001531-1|AAN71286.1| 1461|Drosophila melanogaster RE06719p
protein.
Length = 1461
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 227 DVKYIYNTYLKNYSVIEGAMCCNGDCLAVVVLDRNQLQNTD-MEVLESLEYTSDNV 63
D KY+ YL S G +CC L + D +L + + + + E SDNV
Sbjct: 559 DSKYVLKLYLPKISERNGPICCYRLYLVRINNDNKELPDPEKLNIATYQEVHSDNV 614
>AE014296-2171|AAO41254.1| 1461|Drosophila melanogaster CG10975-PB,
isoform B protein.
Length = 1461
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 227 DVKYIYNTYLKNYSVIEGAMCCNGDCLAVVVLDRNQLQNTD-MEVLESLEYTSDNV 63
D KY+ YL S G +CC L + D +L + + + + E SDNV
Sbjct: 559 DSKYVLKLYLPKISERNGPICCYRLYLVRINNDNKELPDPEKLNIATYQEVHSDNV 614
>AE014296-2170|AAF49892.2| 1462|Drosophila melanogaster CG10975-PA,
isoform A protein.
Length = 1462
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 227 DVKYIYNTYLKNYSVIEGAMCCNGDCLAVVVLDRNQLQNTD-MEVLESLEYTSDNV 63
D KY+ YL S G +CC L + D +L + + + + E SDNV
Sbjct: 559 DSKYVLKLYLPKISERNGPICCYRLYLVRINNDNKELPDPEKLNIATYQEVHSDNV 614
>BT025131-1|ABE73302.1| 314|Drosophila melanogaster IP07320p
protein.
Length = 314
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -2
Query: 161 NGDCLAVVVLDRNQLQNTDMEVLESLEYTSD-NVEL 57
N +C+ +++D+N+LQ ++LE L+ D N++L
Sbjct: 96 NDNCIQQLIVDKNKLQQHKEDMLEKLKDLEDVNLKL 131
>AY051977-1|AAK93401.1| 931|Drosophila melanogaster LD44526p
protein.
Length = 931
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -2
Query: 161 NGDCLAVVVLDRNQLQNTDMEVLESLEYTSD-NVEL 57
N +C+ +++D+N+LQ ++LE L+ D N++L
Sbjct: 860 NDNCIQQLIVDKNKLQQHKEDMLEKLKDLEDVNLKL 895
>AY032851-1|AAK51129.1| 960|Drosophila melanogaster Cornetto
protein.
Length = 960
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -2
Query: 161 NGDCLAVVVLDRNQLQNTDMEVLESLEYTSD-NVEL 57
N +C+ +++D+N+LQ ++LE L+ D N++L
Sbjct: 889 NDNCIQQLIVDKNKLQQHKEDMLEKLKDLEDVNLKL 924
>AE014296-1202|AAF50605.2| 960|Drosophila melanogaster CG32386-PA
protein.
Length = 960
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -2
Query: 161 NGDCLAVVVLDRNQLQNTDMEVLESLEYTSD-NVEL 57
N +C+ +++D+N+LQ ++LE L+ D N++L
Sbjct: 889 NDNCIQQLIVDKNKLQQHKEDMLEKLKDLEDVNLKL 924
>AL138972-2|CAB72285.1| 907|Drosophila melanogaster EG:BACR25B3.10
protein.
Length = 907
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 119 ADFGPTPQRPNNRHCNTSHLQLHCNFSNMY 208
ADF PQ RH ++QL C ++ Y
Sbjct: 809 ADFHQVPQSQLQRHREGENIQLQCTVTDQY 838
>AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan protein.
Length = 4223
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 119 ADFGPTPQRPNNRHCNTSHLQLHCNFSNMY 208
ADF PQ RH ++QL C ++ Y
Sbjct: 3223 ADFHQVPQSQLQRHREGENIQLQCTVTDQY 3252
>AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB,
isoform B protein.
Length = 3215
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 119 ADFGPTPQRPNNRHCNTSHLQLHCNFSNMY 208
ADF PQ RH ++QL C ++ Y
Sbjct: 3117 ADFHQVPQSQLQRHREGENIQLQCTVTDQY 3146
>AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD,
isoform D protein.
Length = 4223
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 119 ADFGPTPQRPNNRHCNTSHLQLHCNFSNMY 208
ADF PQ RH ++QL C ++ Y
Sbjct: 3223 ADFHQVPQSQLQRHREGENIQLQCTVTDQY 3252
>AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA,
isoform A protein.
Length = 4179
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 119 ADFGPTPQRPNNRHCNTSHLQLHCNFSNMY 208
ADF PQ RH ++QL C ++ Y
Sbjct: 3179 ADFHQVPQSQLQRHREGENIQLQCTVTDQY 3208
>AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE,
isoform E protein.
Length = 4228
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 119 ADFGPTPQRPNNRHCNTSHLQLHCNFSNMY 208
ADF PQ RH ++QL C ++ Y
Sbjct: 3117 ADFHQVPQSQLQRHREGENIQLQCTVTDQY 3146
>AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC,
isoform C protein.
Length = 4117
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 119 ADFGPTPQRPNNRHCNTSHLQLHCNFSNMY 208
ADF PQ RH ++QL C ++ Y
Sbjct: 3117 ADFHQVPQSQLQRHREGENIQLQCTVTDQY 3146
>AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF,
isoform F protein.
Length = 4629
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 119 ADFGPTPQRPNNRHCNTSHLQLHCNFSNMY 208
ADF PQ RH ++QL C ++ Y
Sbjct: 3629 ADFHQVPQSQLQRHREGENIQLQCTVTDQY 3658
>AE014297-4158|AAF56734.3| 3298|Drosophila melanogaster CG18437-PA
protein.
Length = 3298
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 159 IATHRTFNYTVIFQICIINVFHVPLFERVRNKQYISRQ 272
+ THRT Y V+ + + P+ + R+ Q+I R+
Sbjct: 2957 VVTHRTPLYIVLLPFILHKISQPPIGDHERHMQFIIRE 2994
>AY553965-1|AAS90559.1| 748|Drosophila melanogaster thisbe protein.
Length = 748
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 130 SNTTTAKQSPLQHIAPSI 183
S T TA +P QH+APS+
Sbjct: 598 STTATAATTPEQHVAPSL 615
>AY094754-1|AAM11107.1| 46|Drosophila melanogaster GM07804p
protein.
Length = 46
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 152 NRHCNTSHLQLHCNFSNMYYKCIS 223
N H N ++ H N SN +++ IS
Sbjct: 19 NHHSNNEYISSHINISNAFHQQIS 42
>AE014134-915|AAS64642.1| 1712|Drosophila melanogaster CG11020-PB,
isoform B protein.
Length = 1712
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 136 TTTAKQSPLQHIAPSITL*FFKYVL*MY 219
TTT +P++H+ P T FK+V +Y
Sbjct: 1537 TTTLDINPMRHLRPEWTEVLFKFVFGIY 1564
>AE013599-1345|AAF58621.2| 748|Drosophila melanogaster CG12443-PA
protein.
Length = 748
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 130 SNTTTAKQSPLQHIAPSI 183
S T TA +P QH+APS+
Sbjct: 598 STTATAATTPEQHVAPSL 615
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,544,609
Number of Sequences: 53049
Number of extensions: 281885
Number of successful extensions: 759
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 444545640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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