Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11d21
(862 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein. 29 0.24
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 27 0.55
AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin bi... 26 1.7
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 25 3.0
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 25 3.9
AY146721-1|AAO12081.1| 144|Anopheles gambiae odorant-binding pr... 25 3.9
AF437884-1|AAL84179.1| 144|Anopheles gambiae odorant binding pr... 25 3.9
AY146729-1|AAO12089.1| 156|Anopheles gambiae odorant-binding pr... 24 5.2
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 23 9.0
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 9.0
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 23 9.0
>AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.24
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +1
Query: 655 LEWCCCKHSRGQRFLSLDMHCWLWSWWVAHVWCIFIIGWATAL 783
+ WC H R RF LD WS + H+ F + A L
Sbjct: 270 IAWCMASHYRCVRFARLDKRHIPWSGTIVHIAWQFSVTVARVL 312
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 27.5 bits (58), Expect = 0.55
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -2
Query: 825 VAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAPLQEQ 649
VAAAAA+ Q S + P P P H Q P ++AAAP Q+Q
Sbjct: 885 VAAAAAAAASQEQQQRSSSSQQHRGPGAAAATGPPPPTHRLEQPP---QVVAAAPTQQQ 940
>AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin
binding protein protein.
Length = 567
Score = 25.8 bits (54), Expect = 1.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 780 SSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAPL 658
S P +Y P++ P P P IQ P T+ ++AP+
Sbjct: 45 SKMPTSY---PSLPAPIVPSPGAPIQQSRPQAVTVRSSAPM 82
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 25.0 bits (52), Expect = 3.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 771 PANYKYTPNMRNPPAPQP 718
PA + PN + PPAP P
Sbjct: 570 PAGFPNLPNAQPPPAPPP 587
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 24.6 bits (51), Expect = 3.9
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = -2
Query: 846 PITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAP 724
P T Q A+ PP + S+P++ ++ PP P
Sbjct: 645 PRTNSQSQASEPTPALPPRADRDSKPSSRDRPKDLPPPPIP 685
>AY146721-1|AAO12081.1| 144|Anopheles gambiae odorant-binding
protein AgamOBP1 protein.
Length = 144
Score = 24.6 bits (51), Expect = 3.9
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 619 WKQSFPKHLFL 651
WKQS PKH FL
Sbjct: 133 WKQSDPKHYFL 143
>AF437884-1|AAL84179.1| 144|Anopheles gambiae odorant binding
protein protein.
Length = 144
Score = 24.6 bits (51), Expect = 3.9
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 619 WKQSFPKHLFL 651
WKQS PKH FL
Sbjct: 133 WKQSDPKHYFL 143
>AY146729-1|AAO12089.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP5 protein.
Length = 156
Score = 24.2 bits (50), Expect = 5.2
Identities = 5/7 (71%), Positives = 5/7 (71%)
Frame = +1
Query: 715 CWLWSWW 735
CW W WW
Sbjct: 7 CWWWRWW 13
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.4 bits (48), Expect = 9.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 757 IYTKHAQPTSSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGT 629
I T++A PT + S+Y R+ YY GT A G+
Sbjct: 3 ISTEYA-PTDGMSRSSYTRSSYRSAYYGGPPEIGGTGAGALGS 44
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.4 bits (48), Expect = 9.0
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -2
Query: 765 NYKYTPNMRNPPAPQPAVHIQ 703
++ Y P++ P P PA+ +Q
Sbjct: 1649 SFDYQPDLSQHPGPSPAIILQ 1669
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 23.4 bits (48), Expect = 9.0
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 786 SQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAA 664
SQ+ P N K N+R+ A + P S+++A+A
Sbjct: 162 SQTETPVNGKRGRNLRSTEEADDAKRAKNDAPSGSSLVASA 202
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,414
Number of Sequences: 2352
Number of extensions: 14932
Number of successful extensions: 36
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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