Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11d18
(859 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 42 1e-04
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 40 6e-04
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 38 0.001
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 37 0.004
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 34 0.022
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 33 0.039
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 33 0.052
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 32 0.091
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 31 0.28
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.28
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 30 0.37
SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine l... 29 0.64
SPCC4B3.14 |cwf20||complexed with Cdc5 protein Cwf20 |Schizosacc... 29 0.64
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.64
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.64
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 29 0.84
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 29 0.84
SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.84
SPAC343.10 |met11|mthfr2|methylenetetrahydrofolate reductase Met... 29 1.1
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 28 1.5
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 28 2.0
SPBC1711.14 |rec15||meiotic recombination protein Rec15|Schizosa... 28 2.0
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 28 2.0
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 28 2.0
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 28 2.0
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 28 2.0
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 27 2.6
SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 27 2.6
SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2... 27 2.6
SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomy... 27 3.4
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 27 3.4
SPCC622.21 |wtf12||wtf element Wtf12|Schizosaccharomyces pombe|c... 27 3.4
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 27 4.5
SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2 |Schizosacch... 27 4.5
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.0
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 6.0
SPCC962.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 26 6.0
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 7.9
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc... 26 7.9
SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|c... 26 7.9
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 7.9
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 41.9 bits (94), Expect = 1e-04
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = -2
Query: 450 LKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRIST 271
LK + ++ EQTQL K +L QQ ++ +LD K++ M + E+Q+ R
Sbjct: 640 LKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLRIELDYTKSNCKQMEE---EMQVLREGH 696
Query: 270 EKALKSLNDDYAKLAAKNARLSNENKVLSNKNIEL---IKHKNLLQNEYTTLQS 118
E +K ++++KL + + N+ ++S+KN +L ++ L N L+S
Sbjct: 697 ESEIKDFIEEHSKLTKQLDDIKNQFGIISSKNRDLLSELEKSKSLNNSLAALES 750
Score = 35.9 bits (79), Expect = 0.007
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 7/170 (4%)
Frame = -2
Query: 633 NVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQA 454
N+ ++ S+ Q + + D A L K E N + + T L E
Sbjct: 593 NLYEITFLSMKQKMQLKSLREEIDNTKEALDLSVKERSIQEEKLNESLKTSKTNLEEQTQ 652
Query: 453 ILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKE------L 292
+ +K ++ + Q +++L+ + M+E++ ++ + + K F E
Sbjct: 653 LAEKYHEELLDNQQKLYDLRIELDYTKSNCKQMEEEMQVLREGHESEIKDFIEEHSKLTK 712
Query: 291 QLKRISTEKAL-KSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLL 145
QL I + + S N D K+ L+N L +KN +L NLL
Sbjct: 713 QLDDIKNQFGIISSKNRDLLSELEKSKSLNNSLAALESKNKKLENDLNLL 762
Score = 33.1 bits (72), Expect = 0.052
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = -2
Query: 357 MQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNK 178
+ ++LD IKN + + ++L +S + KSLN+ A L +KN +L N+ +L+ K
Sbjct: 710 LTKQLDDIKNQFGIISSKNRDL----LSELEKSKSLNNSLAALESKNKKLENDLNLLTEK 765
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 39.5 bits (88), Expect = 6e-04
Identities = 27/117 (23%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = -2
Query: 540 LFEKSLLDDAEDSNNAANSDDTMLSESQAI-LKKLQIDIAEQTQLNIKRQLDLNKLQQTS 364
L EK L + + SN +++ + + + E+ +K+L+ ++ Q +L + ++LQ
Sbjct: 243 LNEKIQLFEQKRSNYSSDGNISKILETDPTSIKELEEEVETQKRLTALWESKSSELQSEV 302
Query: 363 VFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENK 193
+QEKL ++ YNN+ + + + + +E +L+ L + Y + ++ ++ ENK
Sbjct: 303 AALQEKLTSQQSLYNNVTEELNNNKQQLLISENSLRELQEKYDSVVSE-LQVVKENK 358
Score = 27.5 bits (58), Expect = 2.6
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = -2
Query: 390 DLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNAR 211
D KLQQ ++ +LDR+ N +++ + K+ ++ + +++ N+ Y +++
Sbjct: 392 DNMKLQQKVSSLKLQLDRLTNKFSSFCEQVKQ-RIPVVKQQRSEIVRNNIYMNFLSESLE 450
Query: 210 LSNENKVLSNKNIELIKHK 154
SN N L+ EL+ K
Sbjct: 451 TSNNN--LTKVQAELLSTK 467
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 38.3 bits (85), Expect = 0.001
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Frame = -2
Query: 585 NKINDNFDAASLASVLFEKSLLDDAEDSNNAAN---SDDTMLSESQAILKKLQIDIAEQT 415
N + D F++ + A L +KSL A + A N S + LS +Q + ++Q +
Sbjct: 270 NALEDKFNSEA-ARQLLQKSLSIVASNLKQAENKTISYEEKLSIAQNSINEIQTQNRDLK 328
Query: 414 QLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHK-------SFKELQLKRISTEKALK 256
K Q + L + + +QE L+ +KND N+ + KE + K + E +
Sbjct: 329 LETEKLQDQIKALLERNQSLQEALETVKNDEKNLREMNANYETEMKEARQKLNNKEALIS 388
Query: 255 SLNDDYAKLAAKNARLS 205
+DD+ K +RLS
Sbjct: 389 HYDDDFRAKELKISRLS 405
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 36.7 bits (81), Expect = 0.004
Identities = 25/100 (25%), Positives = 51/100 (51%)
Frame = -2
Query: 474 MLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKE 295
+LS Q+ +KK Q D +Q + +L ++++ ++EK + + +D ++ K +
Sbjct: 63 ILSAIQS-MKKQQKDKLQQEN----KDQELKNIEESYKKLEEKTEHLSDDNVSLEKRVEY 117
Query: 294 LQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKN 175
L+ + K L SLN ++ +L K A E + L+ +N
Sbjct: 118 LETENTKLVKTLNSLNSEFLQLLRKIAINVKEGRQLTTEN 157
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 34.3 bits (75), Expect = 0.022
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = -2
Query: 345 LDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIEL 166
LDR N+Y+ + KS EL KSLN+ + L+ A L E++ N + L
Sbjct: 873 LDRYGNEYDILLKSEHELDSSLEEMRNRHKSLNEHFIMLSDSMANLQVEHE---NMSALL 929
Query: 165 IKHKNLLQNEYTTLQSYK 112
+K K L+N+ S K
Sbjct: 930 LKEKMYLKNQTVEQASLK 947
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 33.5 bits (73), Expect = 0.039
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = -2
Query: 453 ILKKLQI---DIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLK 283
+++KL+I + + + N++ +L + +L + + ++DR K ++ + + LQL+
Sbjct: 127 LIQKLEIIEKKLDKSFRKNMEDELRITRLASENNVLISRIDRTKRHFSELFTQKQMLQLQ 186
Query: 282 RISTEKALKSLNDDYAKLAAKNARLSNENKVLSNK 178
++ DDY K+ +N RL E K +K
Sbjct: 187 N-------ENFKDDYEKIKEENKRLYKERKSFLSK 214
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 33.1 bits (72), Expect = 0.052
Identities = 31/140 (22%), Positives = 71/140 (50%), Gaps = 5/140 (3%)
Frame = -2
Query: 516 DAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDR 337
+ E ++ +S + ++KL +I + ++ + + ++LQ+ ++E+ ++
Sbjct: 579 EIEKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNK 638
Query: 336 IKNDYNNMHKSFKELQLKRISTE-KALKSLNDDYAK-LAAKNARL--SNENKVLSNKNIE 169
K D + + E QLK E +L+ N++ + +A K + L SN+NK+L N+ IE
Sbjct: 639 AKEDSTSKTSNLLE-QLKMTEAEVDSLRKENEENKQVIALKESELVKSNDNKLLLNEQIE 697
Query: 168 LIKHK-NLLQNEYTTLQSYK 112
+ + + L+ E ++ + K
Sbjct: 698 SLNDQLSQLKTEMESVTTSK 717
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 32.3 bits (70), Expect = 0.091
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = -2
Query: 468 SESQAILKKLQIDIAEQTQLNIKRQLDL--NKLQQTSVFMQEKLDRIKN---DYNNMHKS 304
+ QA K +DI E + QL++ +K ++ V + ++IK N+HK+
Sbjct: 208 ARDQARKKSRTVDILEGKVNELTHQLNMADSKYNESKVANNSQNNQIKTLKAQNLNIHKN 267
Query: 303 FKELQLKRISTEKALKSLNDDYAKLAAKNARL 208
F+++Q + I T L S + + L + A L
Sbjct: 268 FQKIQSELIQTNSGLYSTKKELSALQVRYATL 299
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 30.7 bits (66), Expect = 0.28
Identities = 21/93 (22%), Positives = 43/93 (46%)
Frame = -2
Query: 471 LSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKEL 292
+SE +A +K I +A Q ++ K + + + + ++ + + K + K E
Sbjct: 517 ISEEEASQRKDAIKLAIQQRIQEKAEAEAKRKAEEKARLEAE-ENAKREAEEQAKREAEE 575
Query: 291 QLKRISTEKALKSLNDDYAKLAAKNARLSNENK 193
+ KR + EKA + + + A +NA+ E K
Sbjct: 576 KAKREAEEKAKREAEEKAKREAEENAKREAEEK 608
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.7 bits (66), Expect = 0.28
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 3/167 (1%)
Frame = -2
Query: 672 VESLHFNVYSINRNVVD---VIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDS 502
+E L NV + + +V +I+ T +++++ + D S+ + EK LL + S
Sbjct: 300 LEELKHNVANYSDAIVHKDKLIEDLSTRISEFDNLKSERDTLSIKNEKLEK-LLRNTIGS 358
Query: 501 NNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDY 322
+ + ++ L E LK+ I Q + L+ +Q + ++ +D +N
Sbjct: 359 LKDSRTSNSQLEEEMVELKESNRTIHSQLT---DAESKLSSFEQENKSLKGSIDEYQN-- 413
Query: 321 NNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSN 181
N+ K ++ E+A SL KLA N+ +NK + +
Sbjct: 414 -NLSSKDKMVKQVSSQLEEARSSLAHATGKLAEINSERDFQNKKIKD 459
Score = 29.5 bits (63), Expect = 0.64
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 4/166 (2%)
Frame = -2
Query: 606 VTSVAQW-NKINDNFDAAS-LASVLFEKSLLDDAEDSNNAANSDDTMLSE--SQAILKKL 439
+ SV Q N +N+ S LA++ E +L S+N + + + ++ S+ +
Sbjct: 126 INSVTQKSNLLNELKQVRSKLAALEHENGILSLQLSSSNKKDKNTSSVTTLTSEEDVSYF 185
Query: 438 QIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKAL 259
Q + +Q + L + + + EKLD+ + DY + + ++ + +
Sbjct: 186 QKKLTNMESNFSAKQSEAYDLSRQLLTVTEKLDKKEKDYEKIKEDVSSIKASLAEEQASN 245
Query: 258 KSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQ 121
KSL + +L L + NK +S L + +N L+ E TLQ
Sbjct: 246 KSLRGEQERL---EKLLVSSNKTVST----LRQTENSLRAECKTLQ 284
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 30.3 bits (65), Expect = 0.37
Identities = 29/150 (19%), Positives = 63/150 (42%), Gaps = 7/150 (4%)
Frame = -2
Query: 594 AQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQT 415
A +IN+ ++ L ++LL + + + ++ L +++ L+ L+ + A
Sbjct: 911 ASLKQINNELESELLEKTSKVETLLSEQNELKEKLSLEEKDLLDTKGELESLRENNATVL 970
Query: 414 QLNIKRQLDLNKLQQTSVFMQEKLDRI-------KNDYNNMHKSFKELQLKRISTEKALK 256
+ LQ+T V +LD++ K + M + +++ K I E +L
Sbjct: 971 SEKAEFNEQCKSLQETIVTKDAELDKLTKYISDYKTEIQEMRLTNQKMNEKSIQQEGSLS 1030
Query: 255 SLNDDYAKLAAKNARLSNENKVLSNKNIEL 166
KL +N+ L ++ +L + EL
Sbjct: 1031 ESLKRVKKLERENSTLISDVSILKQQKEEL 1060
Score = 30.3 bits (65), Expect = 0.37
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = -2
Query: 489 NSDDTMLSESQAILKKLQI-DIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNM 313
N ++ + S A LK +++ +I E L + DL ++ +Q L+ +K+ N
Sbjct: 1135 NKEEKCQNLSDASLKYIELQEIHENLLLKVS---DLENYKKKYEGLQLDLEGLKDVDTN- 1190
Query: 312 HKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLL 145
F+EL K +SL A K + S+ENK LSNK L K N L
Sbjct: 1191 ---FQELSKKHRDLTFNHESLLRQSASYKEKLSLASSENKDLSNKVSSLTKQVNEL 1243
Score = 27.1 bits (57), Expect = 3.4
Identities = 26/127 (20%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Frame = -2
Query: 480 DTMLSESQAILKKLQIDIAEQTQLNIK-----RQL-DLNKLQQTSVFMQEKLDRIKNDYN 319
+++L +S + +KL + +E L+ K +Q+ +L+ ++ K+ + ++Y+
Sbjct: 1206 ESLLRQSASYKEKLSLASSENKDLSNKVSSLTKQVNELSPKASKVPELERKITNLMHEYS 1265
Query: 318 NMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQN 139
+ K+F++ + K + + + L ++L +K KVL E +K L++
Sbjct: 1266 QLGKTFEDEKRKALIASRDNEELRSLKSELESKRKLEVEYQKVL-----EEVKTTRSLRS 1320
Query: 138 EYTTLQS 118
E T L++
Sbjct: 1321 EVTLLRN 1327
>SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine
ligase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 788
Score = 29.5 bits (63), Expect = 0.64
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -2
Query: 669 ESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLL 520
+ +H N YS+ R +V+ TSV W+K D+ + + ++ K LL
Sbjct: 619 DGVHSNGYSLVRKIVEYSDLEYTSVCPWDKNVRLGDSLLIPTRIYVKPLL 668
>SPCC4B3.14 |cwf20||complexed with Cdc5 protein Cwf20
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 290
Score = 29.5 bits (63), Expect = 0.64
Identities = 29/101 (28%), Positives = 44/101 (43%)
Frame = -2
Query: 555 SLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKL 376
SL S +S D E++ A+ S D L Q +KL +D +++ +KRQ+DL K
Sbjct: 2 SLVSYPRSESESDIEEETPLASKSFDPTLF--QHARRKLSVDSTKKSPKRLKRQVDLQKS 59
Query: 375 QQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKS 253
E D I N+ + + L + E A KS
Sbjct: 60 SFNDKTFNES-DVISNERFKSNDLLELLPAPKNQAELAPKS 99
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.5 bits (63), Expect = 0.64
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Frame = -2
Query: 501 NNAANSDDTMLSESQAILKKLQIDIAE-QTQLN-IKRQLDLNKLQQTSVFMQEKLDRIKN 328
N D T L E + + L+ + E +T+L ++ D K Q S + E+++ +K
Sbjct: 1344 NKYERVDPTQLEELKKNCEALEKEKQELETKLQETAKETDTFKQQVNS--LNEEVENLKK 1401
Query: 327 DYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIE 169
+ + K +L EK + A L+N+NK L++KN E
Sbjct: 1402 EVEQANT--KNTRLAAAWNEKCENLKKSSLTRFAHLKQELTNKNKELTSKNAE 1452
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.5 bits (63), Expect = 0.64
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = -2
Query: 474 MLSESQAILKKL---QIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKS 304
+ +E Q+I + L Q +I+ + L+ + L+ +++ + K ++ DY N+
Sbjct: 921 LYAEKQSIEEDLANKQTEISYLSDLSSTLEKKLSSIKKDEQTISSKYKELEKDYLNIMAD 980
Query: 303 FKELQLKRISTEKALKSLNDDYAKLAAKNARLSNE 199
++ + EKA+ N + +L K RL +E
Sbjct: 981 YQHSSQHLSNLEKAINEKNLNIRELNEKLMRLDDE 1015
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 29.1 bits (62), Expect = 0.84
Identities = 20/103 (19%), Positives = 47/103 (45%)
Frame = -2
Query: 504 SNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKND 325
S+ + ++T +S+ QI+ E+ I + D KLQ+ + E+ +++ +
Sbjct: 176 SSQTVHEENTAALDSEIDELMKQINEKEEKIEEISDETD--KLQKLLRELDEEKEKVYAE 233
Query: 324 YNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNEN 196
+ + + Q+K++S E+ N ++ + K +L N
Sbjct: 234 EQEFYNNLNQFQIKKLSLERQYDCANLEFEHNSRKLEKLQKMN 276
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 29.1 bits (62), Expect = 0.84
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = -2
Query: 372 QTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENK 193
QT+ ++L++I + NN K+ K R +K L+ + AKLA KN S++
Sbjct: 21 QTAQNPLKELEKIL-ERNNKQKNKKSRNQVRREKKKLLREKTNSGAKLAEKN---SDDKD 76
Query: 192 VLSNKNIELIKHKNLLQNEYTT 127
L+ N L K N Y T
Sbjct: 77 QLTENNDNLYNDKKSNGNFYDT 98
>SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 166
Score = 29.1 bits (62), Expect = 0.84
Identities = 28/126 (22%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Frame = -2
Query: 531 KSLLDDAEDSNNAANSDDTMLSESQAILKK-LQIDIAEQTQLNIKRQLDLNKLQQTSVFM 355
+ L + + S++ + D+ S+ Q + K+ +++ + Q N+ + DLN L+Q S
Sbjct: 38 QELQEKVKFSSSRFYNKDSTYSKDQGLAKESAALELQKLKQENVLLRKDLNNLEQISDCY 97
Query: 354 QEKLDRIKN---DYN-NMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVL 187
+ +D I Y M++ + I +AL S + K+ +N + N+ K
Sbjct: 98 AKGMDDIMKHVATYTATMNERMNACHKEYIKMYEALASERNSLYKINEQNVQSLNKVKEW 157
Query: 186 SNKNIE 169
K++E
Sbjct: 158 LLKSLE 163
Score = 26.6 bits (56), Expect = 4.5
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -2
Query: 357 MQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAK---LAAKNARLSNENKVL 187
MQ++LD Y + K+ +ELQ K + + + Y+K LA ++A L E + L
Sbjct: 19 MQKELDLSFERYERLFKTTQELQEKVKFSSSRFYNKDSTYSKDQGLAKESAAL--ELQKL 76
Query: 186 SNKNIELIKHKNLLQ 142
+N+ L K N L+
Sbjct: 77 KQENVLLRKDLNNLE 91
>SPAC343.10 |met11|mthfr2|methylenetetrahydrofolate reductase
Met11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 641
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/60 (21%), Positives = 27/60 (45%)
Frame = -2
Query: 675 RVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNN 496
RV HF ++ R+V ++K S +W ++ + L ++ LD+ + +N
Sbjct: 282 RVHGFHFCTLNLERSVALILKNSGLLTKRWKQVESEMEDEKLLRTTRKRLSLDEPAELHN 341
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 28.3 bits (60), Expect = 1.5
Identities = 29/124 (23%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Frame = -2
Query: 558 ASLASVLFEKSLLDDAEDS-NNAANSDDTMLSESQAILKKLQI-----DI--AEQTQLNI 403
A L V + SL + +S + + + ++ L E + K+L++ DI E QL+
Sbjct: 27 AKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSR 86
Query: 402 KRQLDLNKLQQTSVFMQEKLDRIKN-DYNNMH--KSFKELQLKRISTEKALKSLNDDYAK 232
K +L +L+ ++E ++++ D H + + L+ +R E+ L+ + D Y K
Sbjct: 87 KVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSLERERDDMEQKLEEMTDKYTK 146
Query: 231 LAAK 220
+ A+
Sbjct: 147 VKAE 150
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = -2
Query: 573 DNFDAASL----ASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLN 406
D F+ AS ASV E+S ++ A NNAA S + + S +++ + + ++AE Q
Sbjct: 833 DEFNGASETVDGASVEAERSAMEAAA-LNNAAESTEVVGSSPESVASEQEENVAESAQAR 891
Query: 405 IK 400
++
Sbjct: 892 VE 893
>SPBC1711.14 |rec15||meiotic recombination protein
Rec15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 180
Score = 27.9 bits (59), Expect = 2.0
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Frame = -2
Query: 591 QWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKL-QIDIA-EQ 418
Q K N A+ LA + ++ +++ + S+ SQ +L+ L QI+++ +Q
Sbjct: 24 QHQKSQSNQIASCLAEMNTKQEVVNQTIGQLGRSISE-VQQQNSQLVLQSLNQINMSMQQ 82
Query: 417 TQLNIKRQLD-LNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLK-RISTEKALKSLND 244
L I+ +NKL+QT M K + ++ + N+ K+ + + I T+K L
Sbjct: 83 VALGIQDYASRINKLEQTMSDMNLKFEALQKEQNSNTKTLADCTSQMTIITKKLDAELKK 142
Query: 243 DYAKLAAKNAR-LSNENKVLSN 181
Y + K R + N+ SN
Sbjct: 143 RY--MTTKQTRTVQNQTMPRSN 162
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1328
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -2
Query: 399 RQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDY 238
R L+ N + + Q++++R+ Y+N+ +E LK + EK DDY
Sbjct: 448 RDLEFNDEDEDEI-EQDEIERVLQKYDNIPLLNEEQALKEKNVEKDFIQWKDDY 500
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 27.9 bits (59), Expect = 2.0
Identities = 25/108 (23%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = -2
Query: 435 IDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALK 256
+D++ L+ + L + ++++ +Q+K ++ +Y N+ + LQ + + E AL+
Sbjct: 781 LDVSNTAILSFEDSLRRERDEKST--LQQKCLNLQYEYENVRIELENLQSRALELESALE 838
Query: 255 SLNDDYAKLAAKNARLSNENKVLS--NKNIELIKHKNLLQNEYTTLQS 118
D AK +K S +K+LS N+N + +K + + + + L+S
Sbjct: 839 QSVSD-AKY-SKAIMQSGLSKLLSSINENKDNLKEFSKSKQKISYLES 884
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/83 (20%), Positives = 39/83 (46%)
Frame = -2
Query: 414 QLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYA 235
Q N + Q L + + S ++ + +++ DY+ + F+E K +S +K ++L
Sbjct: 674 QKNTELQQLLKQNESASELLKSRNEKLCVDYDKLRSVFEEDSSKILSLQKENENLQSQIL 733
Query: 234 KLAAKNARLSNENKVLSNKNIEL 166
+++ + + + L N EL
Sbjct: 734 QISEELVDYRSRCEALEYGNYEL 756
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -2
Query: 501 NNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFM 355
NN + D+T+ +E+ KK + A L ++L LN +TS+F+
Sbjct: 524 NNVPSGDNTLSTEALQDKKKSEELTAHSKILQAAKKLRLNSTLRTSIFV 572
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/95 (20%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = -2
Query: 405 IKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLA 226
IK + +K+ + + ++DR+K + N + +E ++ L L ++YA +
Sbjct: 3311 IKSICNYSKVLEKLEPLNSEVDRLKLEQKNAEECIQETIAACKDLDEKLLQLQEEYASMI 3370
Query: 225 AKNARLS---NENKVLSNKNIELIKHKNLLQNEYT 130
++ + +E K ++IE+I ++ +NE++
Sbjct: 3371 SEIHSMELQMDEVKCKMQRSIEVITDLSIERNEWS 3405
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 27.5 bits (58), Expect = 2.6
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = -2
Query: 519 DDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNK-LQQTSVFMQE-- 349
DD +D D ++ +S +KK++ D+ E + +L K Q + E
Sbjct: 751 DDVKDLKQRLPELDRLILQSDQAIKKIERDMQEWKHNKGSKMAELEKEFNQYKHKLDEFT 810
Query: 348 -KLDRIKNDYNNMHKSFKELQ 289
L++ +NDYN + ++L+
Sbjct: 811 PILEKSENDYNGVKLECEQLE 831
>SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 27.5 bits (58), Expect = 2.6
Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Frame = -2
Query: 483 DDTMLSESQAILKKLQIDIAEQTQ--LNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMH 310
DDT SESQ + L QTQ + + + +L+ + +V E + + + +H
Sbjct: 180 DDTFFSESQRVTSPLTTSQTVQTQPPQSPEAKTELSLINTKTVIFPENYEDGPSFRSMLH 239
Query: 309 KSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYT 130
+ ++ L + +K +K + A + ++ LS + + ++L + Y
Sbjct: 240 ELEQKSSLMKYYCKKIMKRIVQLSDAYDASQVAVMKLSETLSEASNSTSMNMDILLDSYL 299
Query: 129 T 127
T
Sbjct: 300 T 300
>SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 27.5 bits (58), Expect = 2.6
Identities = 31/156 (19%), Positives = 62/156 (39%)
Frame = -2
Query: 630 VVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAI 451
VVDV+K S A + D FE D + S + N D +++
Sbjct: 43 VVDVLKVKSESSADELEERDAHLDRFRRDSTFESETSDHEDFSGGSENELDEETTKNANS 102
Query: 450 LKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRIST 271
+KK+ ++ E+ + IKR + + KL +I + Y + + + S
Sbjct: 103 IKKISLEEVEKQRKAIKRSGVIYLSRIPPYMAPNKLRQILSQYGKIGRVY---LTPESSA 159
Query: 270 EKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELI 163
++A + N ++ + + E+K ++ EL+
Sbjct: 160 KRAQRLRNGGNKRVMYEEGWIEFESKRVAKSVAELL 195
>SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 336
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 258 KSLNDDYAKLAAKNARLSNENKVLSN-KNIELIKHKNLLQNE 136
K+ D + L K+ L N + L++ + ++ IKHK++ QNE
Sbjct: 189 KTRKVDASALEKKSCLLPNSSGTLTDQRGLDTIKHKSIEQNE 230
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.1 bits (57), Expect = 3.4
Identities = 20/104 (19%), Positives = 50/104 (48%)
Frame = -2
Query: 429 IAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSL 250
+ + ++I+ + K+Q V + +++ +K+D+ N+++ + +K L +
Sbjct: 289 VRNEESIDIRSYVFHKKIQLIKVTISSEMNILKSDFANLYRPY-----FNFLRQKKLIPI 343
Query: 249 NDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQS 118
N + + A +S S+KN++ K K+ + + +T L S
Sbjct: 344 NCECLNIKAYTLFVSLRKYSFSSKNVQ-SKEKSKIMSCFTLLIS 386
>SPCC622.21 |wtf12||wtf element Wtf12|Schizosaccharomyces pombe|chr
3|||Manual
Length = 197
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 669 ESLHFNVYSINRNVVDVIKCSVTSVAQWNKIN 574
+ LH N+YS+ R ++ V+ SV W +N
Sbjct: 78 KDLHPNIYSLLRLLIAVLAVSVVFFTAWGCVN 109
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = -2
Query: 399 RQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYA 235
R+ ++ + ++T + DR++ +M S + L+ +K L++L DDYA
Sbjct: 235 RRREIRQARKTRRSDAQSYDRLRRLRQSMETSLQLLEQVYKREQKKLQALEDDYA 289
>SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 26.6 bits (56), Expect = 4.5
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +2
Query: 542 TLAKEAASKLSFILF--HCATLVTL-HLITSTTFRFML*TLKC-KLSTLHRGHGIFFRFL 709
+++++ AS+L + LF H A L++L +L T ML + + LHRGH + F
Sbjct: 281 SISQQKASELMYKLFSEHIAFLLSLKNLPEEATLDCMLSICQVFENDNLHRGHSDEYTFA 340
Query: 710 ILRMHIE 730
+L +E
Sbjct: 341 MLEQLLE 347
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 26.2 bits (55), Expect = 6.0
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 14/144 (9%)
Frame = -2
Query: 531 KSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAE-QTQLN------IKRQLDLN--- 382
K+ DD+E + + L E Q+ L + +I + + ++N KR+ DL
Sbjct: 185 KANADDSEGKQTLVSKREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRL 244
Query: 381 -KLQQTSVFMQE---KLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNA 214
K+++ + E KL ++NN K F+E + I K S A +
Sbjct: 245 LKVEEHEKSLNERATKLSEANENFNNRFKEFEEREKSAIKQNKEQSSEGSKTANQTHEQK 304
Query: 213 RLSNENKVLSNKNIELIKHKNLLQ 142
L N L K ++ K LL+
Sbjct: 305 ELINS---LEKKVSDIALEKQLLE 325
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 6.0
Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Frame = -2
Query: 534 EKSLLDDAEDS--NNAANSDDTMLSESQAI---LKKLQIDIAEQTQLNIKRQLDL---NK 379
E+S+L D +S +N N + ++ + + LK++Q ++ E + +Q +L N
Sbjct: 971 ERSILIDELESYRSNQFNYQNNLVQDKNELEERLKEIQKEL-EVYNNHFMKQAELMTSNV 1029
Query: 378 LQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSN 202
++ + ++ + +++ NN+ L+ R K KSL DDY +L A+ L +
Sbjct: 1030 TDESQLMLKTLREALQSKTNNIDHLSTILERNR----KEYKSLLDDYNQLRARYKNLQS 1084
>SPCC962.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 536
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 857 VCQXAMQHFVFRLQKLKIILCNQ*TD 780
+C QH + L K K+I+CN+ D
Sbjct: 126 LCVPIAQHVLMGLAKAKVIVCNEEAD 151
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 7.9
Identities = 21/82 (25%), Positives = 36/82 (43%)
Frame = -2
Query: 444 KLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEK 265
KL+ + A + +K + ++ + V QEK DR+K N + +E+ + + EK
Sbjct: 385 KLEEERALHEEKLMKMEAEMKTIFSQKV--QEKEDRLKQSENELRTRHREM---KAALEK 439
Query: 264 ALKSLNDDYAKLAAKNARLSNE 199
L D +L A NE
Sbjct: 440 QKADLIDHKNRLMQAKAAAENE 461
>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 488
Score = 25.8 bits (54), Expect = 7.9
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Frame = -2
Query: 609 SVTSV-AQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQI 433
S TS+ A + + +D+ +L ++L + ++ + A S D L + K+
Sbjct: 65 SATSLPALLSLFQEEWDSVALEQFELRRNLTETKQELSTALYSLDAALRVISRLTKER-- 122
Query: 432 DIAEQTQLNIKRQLDL---NKLQQTSVFMQEKLDRIKNDYNN-MHKSFKELQLKRISTEK 265
D A + + ++ V M E D++K + + K+F+EL KR T+
Sbjct: 123 DEAREALAKFSDNIGTVSSKTIEVQEVEMGESDDQLKTSLRSTVEKTFQELSSKRKRTKL 182
Query: 264 ALKSLNDD 241
K DD
Sbjct: 183 QPKWATDD 190
>SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 216
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/56 (17%), Positives = 26/56 (46%)
Frame = -2
Query: 336 IKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIE 169
I N Y++MH+ + + + ++ + D+A L ++ + + V + +E
Sbjct: 67 ISNVYSDMHEKISDFSVTKEQQDRVMYQQKVDFAHLRSELQSIERQEMVALHSQVE 122
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 119 DCNVVYSFCNKFLCLINSIFLFDK 190
+C VYS+ N LCLI S +F K
Sbjct: 35 NCLEVYSYENNRLCLITSANIFAK 58
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,779,888
Number of Sequences: 5004
Number of extensions: 48398
Number of successful extensions: 236
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 426466470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -