Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11d03
(232 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT030210-1|ABN49349.1| 158|Drosophila melanogaster IP18075p pro... 91 3e-19
BT015189-1|AAT94418.1| 83|Drosophila melanogaster RH57501p pro... 89 1e-18
AJ009557-1|CAA08751.1| 83|Drosophila melanogaster ribosomal pr... 89 1e-18
AE014134-497|AAN10394.1| 83|Drosophila melanogaster CG2986-PD,... 89 1e-18
AE014134-496|AAN10393.1| 83|Drosophila melanogaster CG2986-PC,... 89 1e-18
AE014134-495|AAN10392.1| 83|Drosophila melanogaster CG2986-PB,... 89 1e-18
AE014134-494|AAF51191.1| 83|Drosophila melanogaster CG2986-PA,... 89 1e-18
BT025816-1|ABF85716.1| 580|Drosophila melanogaster IP02907p pro... 26 8.1
AY058541-1|AAL13770.1| 664|Drosophila melanogaster LD24308p pro... 26 8.1
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi... 26 8.1
AE014298-1094|AAS65275.1| 646|Drosophila melanogaster CG2206-PB... 26 8.1
AE014298-1093|AAF46301.1| 664|Drosophila melanogaster CG2206-PA... 26 8.1
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA... 26 8.1
>BT030210-1|ABN49349.1| 158|Drosophila melanogaster IP18075p
protein.
Length = 158
Score = 90.6 bits (215), Expect = 3e-19
Identities = 42/52 (80%), Positives = 44/52 (84%)
Frame = -3
Query: 188 KMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSK 33
KM+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR D SK
Sbjct: 16 KMENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSK 67
>BT015189-1|AAT94418.1| 83|Drosophila melanogaster RH57501p
protein.
Length = 83
Score = 88.6 bits (210), Expect = 1e-18
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -3
Query: 185 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSK 33
M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR D SK
Sbjct: 1 MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSK 51
>AJ009557-1|CAA08751.1| 83|Drosophila melanogaster ribosomal
protein S21 protein.
Length = 83
Score = 88.6 bits (210), Expect = 1e-18
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -3
Query: 185 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSK 33
M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR D SK
Sbjct: 1 MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSK 51
>AE014134-497|AAN10394.1| 83|Drosophila melanogaster CG2986-PD,
isoform D protein.
Length = 83
Score = 88.6 bits (210), Expect = 1e-18
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -3
Query: 185 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSK 33
M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR D SK
Sbjct: 1 MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSK 51
>AE014134-496|AAN10393.1| 83|Drosophila melanogaster CG2986-PC,
isoform C protein.
Length = 83
Score = 88.6 bits (210), Expect = 1e-18
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -3
Query: 185 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSK 33
M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR D SK
Sbjct: 1 MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSK 51
>AE014134-495|AAN10392.1| 83|Drosophila melanogaster CG2986-PB,
isoform B protein.
Length = 83
Score = 88.6 bits (210), Expect = 1e-18
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -3
Query: 185 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSK 33
M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR D SK
Sbjct: 1 MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSK 51
>AE014134-494|AAF51191.1| 83|Drosophila melanogaster CG2986-PA,
isoform A protein.
Length = 83
Score = 88.6 bits (210), Expect = 1e-18
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -3
Query: 185 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSK 33
M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR D SK
Sbjct: 1 MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSK 51
>BT025816-1|ABF85716.1| 580|Drosophila melanogaster IP02907p
protein.
Length = 580
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -1
Query: 184 CRTTPVNSLTCTARGNARPATASSTLRTMLQC 89
CR T + T + A P T + LR + +C
Sbjct: 4 CRMTTCGTFTFEGKSRALPVTVTRCLRNIFRC 35
>AY058541-1|AAL13770.1| 664|Drosophila melanogaster LD24308p
protein.
Length = 664
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 191 YKMQNDAGEFVDLYCPRKCSASNRLIHAK 105
Y+ G F DLYC R+ S RL + +
Sbjct: 325 YQSTRSEGCFKDLYCSRQPKCSGRLYNCR 353
>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
ubiquitin-conjugatingenzyme protein.
Length = 4876
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -3
Query: 161 VDLYCPRKCSASNRLIHAKDHASVQLVIADVDPA 60
+D++C + + RL+ D + LV++D+ PA
Sbjct: 1779 IDIWCFDEETDCTRLVQVNDIQTKTLVLSDIQPA 1812
>AE014298-1094|AAS65275.1| 646|Drosophila melanogaster CG2206-PB,
isoform B protein.
Length = 646
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 191 YKMQNDAGEFVDLYCPRKCSASNRLIHAK 105
Y+ G F DLYC R+ S RL + +
Sbjct: 307 YQSTRSEGCFKDLYCSRQPKCSGRLYNCR 335
>AE014298-1093|AAF46301.1| 664|Drosophila melanogaster CG2206-PA,
isoform A protein.
Length = 664
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 191 YKMQNDAGEFVDLYCPRKCSASNRLIHAK 105
Y+ G F DLYC R+ S RL + +
Sbjct: 325 YQSTRSEGCFKDLYCSRQPKCSGRLYNCR 353
>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
protein.
Length = 4876
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -3
Query: 161 VDLYCPRKCSASNRLIHAKDHASVQLVIADVDPA 60
+D++C + + RL+ D + LV++D+ PA
Sbjct: 1779 IDIWCFDEETDCTRLVQVNDIQTKTLVLSDIQPA 1812
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,253,905
Number of Sequences: 53049
Number of extensions: 169211
Number of successful extensions: 502
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 24,988,368
effective HSP length: 56
effective length of database: 22,017,624
effective search space used: 440352480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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