Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11d01
(704 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6N9X3 Cluster: Cytochrome c oxidase polyprotein IV; n=... 219 7e-56
UniRef50_Q9VIQ8 Cluster: CG10664-PA, isoform A; n=12; Endopteryg... 204 1e-51
UniRef50_Q27123 Cluster: Cytochrome c oxidase subunit IV; n=2; P... 185 1e-45
UniRef50_Q0PWT8 Cluster: Cytochrome c oxidase polypeptide IV-lik... 184 1e-45
UniRef50_Q8T4H8 Cluster: AT07685p; n=2; melanogaster subgroup|Re... 183 3e-45
UniRef50_UPI00015B49D2 Cluster: PREDICTED: similar to cytochrome... 180 3e-44
UniRef50_UPI00015B5FAE Cluster: PREDICTED: similar to cytochrome... 154 2e-36
UniRef50_P13073 Cluster: Cytochrome c oxidase subunit 4 isoform ... 135 9e-31
UniRef50_O46584 Cluster: Cytochrome c oxidase subunit 4 isoform ... 135 1e-30
UniRef50_UPI0000589031 Cluster: PREDICTED: similar to cytochrome... 132 6e-30
UniRef50_P80971 Cluster: Cytochrome c oxidase subunit 4 isoform ... 132 6e-30
UniRef50_Q71SZ7 Cluster: Cytochrome c oxidase subunit IV; n=5; T... 130 2e-29
UniRef50_Q9U329 Cluster: Putative uncharacterized protein; n=2; ... 130 2e-29
UniRef50_Q96KJ9 Cluster: Cytochrome c oxidase subunit 4 isoform ... 125 1e-27
UniRef50_Q6PH92 Cluster: MGC68573 protein; n=4; Xenopus|Rep: MGC... 124 3e-27
UniRef50_UPI000069ED0B Cluster: Cytochrome c oxidase subunit 4 i... 120 3e-26
UniRef50_Q6PBK2 Cluster: LOC402880 protein; n=4; Danio rerio|Rep... 113 4e-24
UniRef50_Q5DF62 Cluster: SJCHGC09183 protein; n=2; Schistosoma j... 109 6e-23
UniRef50_O46582 Cluster: Cytochrome c oxidase subunit 4 isoform ... 96 6e-19
UniRef50_A7RRF4 Cluster: Predicted protein; n=1; Nematostella ve... 66 8e-10
UniRef50_P06810 Cluster: Cytochrome c oxidase polypeptide V, mit... 57 5e-07
UniRef50_O93980 Cluster: Cytochrome c oxidase polypeptide V, mit... 49 1e-04
UniRef50_Q4P348 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_Q86WV2 Cluster: COX4I1 protein; n=2; Homo/Pan/Gorilla g... 42 0.015
UniRef50_Q0V3Y7 Cluster: Putative uncharacterized protein; n=1; ... 41 0.026
UniRef50_UPI000023ECB4 Cluster: hypothetical protein FG04315.1; ... 41 0.034
UniRef50_Q5K946 Cluster: Cytochrome c oxidase subunit V, putativ... 40 0.060
UniRef50_O74988 Cluster: Cytochrome c oxidase polypeptide V, mit... 38 0.32
UniRef50_A3VH18 Cluster: Putative uncharacterized protein; n=1; ... 36 0.73
UniRef50_A4REI9 Cluster: Putative uncharacterized protein; n=1; ... 36 0.73
UniRef50_UPI0000F1EF70 Cluster: PREDICTED: similar to ubiquitous... 34 3.9
UniRef50_P06336 Cluster: Ig epsilon chain C region; n=37; Glires... 33 6.8
>UniRef50_A6N9X3 Cluster: Cytochrome c oxidase polyprotein IV; n=1;
Ornithodoros parkeri|Rep: Cytochrome c oxidase
polyprotein IV - Ornithodoros parkeri
Length = 180
Score = 219 bits (534), Expect = 7e-56
Identities = 101/182 (55%), Positives = 129/182 (70%), Gaps = 4/182 (2%)
Frame = -3
Query: 606 MANYLMRRA----LINAIRVPVCARAGSTGNTELAKIGDREWVGYGFNGQPNYVDRPDFP 439
MAN+L++ A +N V + A G +IG RE VG+G NG+ Y DRPDFP
Sbjct: 1 MANHLLKLAGKTLRVNPAMVQIQPVAAYHGRQ---RIGKREVVGFGMNGEYTYYDRPDFP 57
Query: 438 LPAIRFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGVVGW 259
+PAIR++E T +I+ LREKEKGDW+ L+L+E+K LYR SFCQT+AE AP GEWK +
Sbjct: 58 MPAIRYKEPTAEIEKLREKEKGDWKNLSLDERKALYRFSFCQTYAEMNAPRGEWKPTIAG 117
Query: 258 ALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASKWDYENNR 79
AL+ W+Y+ +K VY P+P SLS E +KAQLQRM+DL+VNPIDG+ASKWDYENNR
Sbjct: 118 ALLCMGFTVWVYVFLKKCVYGPVPSSLSPESKKAQLQRMIDLRVNPIDGIASKWDYENNR 177
Query: 78 WK 73
WK
Sbjct: 178 WK 179
>UniRef50_Q9VIQ8 Cluster: CG10664-PA, isoform A; n=12;
Endopterygota|Rep: CG10664-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 182
Score = 204 bits (499), Expect = 1e-51
Identities = 97/181 (53%), Positives = 127/181 (70%), Gaps = 3/181 (1%)
Frame = -3
Query: 606 MANYLMRRALIN--AIRVPVCARAGSTGNTE-LAKIGDREWVGYGFNGQPNYVDRPDFPL 436
MA L+ A++ A ++P A+ GS L KIG RE VGYG+NG Y DR D+PL
Sbjct: 1 MALRLLNSAVLRQLASQLPKSAQVGSVAAVHTLDKIGKREIVGYGWNGTACYADRVDYPL 60
Query: 435 PAIRFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGVVGWA 256
PA+RFRE T +I ALR KE+GDW+KL+ +E K LYRASFCQT AE QA +GEWK +G +
Sbjct: 61 PAVRFREPTNEINALRAKEQGDWKKLSTQEIKALYRASFCQTIAEVQAGSGEWKLHLGVS 120
Query: 255 LVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASKWDYENNRW 76
L+ + A W+ + M +FVY +P + EE QKAQLQR++DL++NP+ GL SKWDYEN +W
Sbjct: 121 LLFCAAAIWVAVLMNIFVYDELPVTFDEEHQKAQLQRIIDLEINPVTGLTSKWDYENKKW 180
Query: 75 K 73
K
Sbjct: 181 K 181
>UniRef50_Q27123 Cluster: Cytochrome c oxidase subunit IV; n=2;
Protostomia|Rep: Cytochrome c oxidase subunit IV -
Urechis caupo (Innkeeper worm) (Spoonworm)
Length = 186
Score = 185 bits (450), Expect = 1e-45
Identities = 82/180 (45%), Positives = 125/180 (69%), Gaps = 1/180 (0%)
Frame = -3
Query: 609 KMANYLMRRALIN-AIRVPVCARAGSTGNTELAKIGDREWVGYGFNGQPNYVDRPDFPLP 433
K+A L++R++ + + ++P + + + K+G+R+ VGYG NG P Y+D P+FP P
Sbjct: 7 KVAPRLVQRSMSSLSAQIPEAQLSQTQKDAAYPKLGNRDIVGYGMNGLPTYIDLPEFPAP 66
Query: 432 AIRFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGVVGWAL 253
A+R+ E+T ++ ALREKEKGDW L++EEKK LYRASF +T++E +AP GEWK V+ +
Sbjct: 67 AVRYGENTAEVVALREKEKGDWNSLSVEEKKALYRASFRETYSEMKAPNGEWKSVLAGVI 126
Query: 252 VLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASKWDYENNRWK 73
+ SL W+ + MK VY P+P +++EE ++ L+ M+ PI G+ASK+DYENNRWK
Sbjct: 127 LGISLTGWVMIWMKQNVYPPLPHTINEEYKEGNLKMMVKQNQGPITGVASKYDYENNRWK 186
>UniRef50_Q0PWT8 Cluster: Cytochrome c oxidase polypeptide IV-like
protein; n=1; Diaphorina citri|Rep: Cytochrome c oxidase
polypeptide IV-like protein - Diaphorina citri (Asian
citrus psyllid)
Length = 155
Score = 184 bits (449), Expect = 1e-45
Identities = 82/145 (56%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
Frame = -3
Query: 504 DREWVGYGFNGQPNYVDRPDFPLPAIRFREDTPDIKALREKEKGDWRKLTLEEKKTLYRA 325
+RE VGYGFNG+P Y+D P FP P+IRF+ T +++ L++KEKGDW+ LTLEEKKTLYRA
Sbjct: 10 NREVVGYGFNGEPGYIDNPMFPYPSIRFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRA 69
Query: 324 SFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIYMAM-KVFVYSPIPDSLSEERQKAQLQ 148
SF QTF E APTGEWKG G A ++ +++ Y+ M KV ++ ++LSEE ++ LQ
Sbjct: 70 SFAQTFVEMNAPTGEWKGAFGIAFMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQ 129
Query: 147 RMLDLKVNPIDGLASKWDYENNRWK 73
+M+DL+ NPI G ASKWDYE N WK
Sbjct: 130 KMIDLRWNPITGTASKWDYEKNDWK 154
>UniRef50_Q8T4H8 Cluster: AT07685p; n=2; melanogaster subgroup|Rep:
AT07685p - Drosophila melanogaster (Fruit fly)
Length = 176
Score = 183 bits (446), Expect = 3e-45
Identities = 85/158 (53%), Positives = 112/158 (70%)
Frame = -3
Query: 546 RAGSTGNTELAKIGDREWVGYGFNGQPNYVDRPDFPLPAIRFREDTPDIKALREKEKGDW 367
R S G+ + DR+ VG+G NG+P Y D PD P PAIR+RE +P++ ALREKE DW
Sbjct: 19 RFASGGDGIRLMVADRQVVGHGINGRPIYFDSPDCPFPAIRYREVSPELCALREKELDDW 78
Query: 366 RKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIP 187
+KL+L+EKK LYR SFCQT+AEFQ T EWK +G AL L S+ I + MK +Y +P
Sbjct: 79 KKLSLDEKKQLYRYSFCQTYAEFQHITPEWKMCLGVALWLVSIGIAISITMKTVLYGKLP 138
Query: 186 DSLSEERQKAQLQRMLDLKVNPIDGLASKWDYENNRWK 73
D+ ++ERQ AQL+R++ L++NPI GLASKW Y N+WK
Sbjct: 139 DTFNDERQSAQLRRIIQLQMNPITGLASKWCYRENKWK 176
>UniRef50_UPI00015B49D2 Cluster: PREDICTED: similar to cytochrome c
oxidase subunit IV; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to cytochrome c oxidase subunit IV -
Nasonia vitripennis
Length = 167
Score = 180 bits (438), Expect = 3e-44
Identities = 86/159 (54%), Positives = 114/159 (71%)
Frame = -3
Query: 585 RALINAIRVPVCARAGSTGNTELAKIGDREWVGYGFNGQPNYVDRPDFPLPAIRFREDTP 406
RAL +R + T KIG+RE V +G N +P Y+D DFP+PAIR++E TP
Sbjct: 4 RALTTFLRSAAVQAQTRSVYTIQNKIGNREVVCHGMNSEPIYIDTTDFPMPAIRYKEVTP 63
Query: 405 DIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWI 226
DI+ALREKEKGDW+KL++E+KK LYRASF QTFAE +AP+G+WK V+G +LV S++ W+
Sbjct: 64 DIQALREKEKGDWKKLSVEDKKALYRASFRQTFAEMEAPSGDWKSVIGLSLVGISISMWL 123
Query: 225 YMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGL 109
++ K +VY P+P SLSEE Q AQL+RM L + PI GL
Sbjct: 124 FVWTKHYVYPPLPSSLSEENQLAQLERMKLLDMQPITGL 162
>UniRef50_UPI00015B5FAE Cluster: PREDICTED: similar to cytochrome c
oxidase subunit IV; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to cytochrome c oxidase subunit IV -
Nasonia vitripennis
Length = 207
Score = 154 bits (374), Expect = 2e-36
Identities = 71/134 (52%), Positives = 94/134 (70%)
Frame = -3
Query: 510 IGDREWVGYGFNGQPNYVDRPDFPLPAIRFREDTPDIKALREKEKGDWRKLTLEEKKTLY 331
IG+RE V +G NG P Y+D D+P PAIR+RE TP++ ALREKE+GDWRKLT+ EKK LY
Sbjct: 47 IGNREIVCHGMNGNPTYIDSWDYPFPAIRYRECTPELMALREKERGDWRKLTIGEKKCLY 106
Query: 330 RASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQL 151
RASF QTF+E QAP +WK ++G L+ SL+ WI++ + VY P+S S E + AQ
Sbjct: 107 RASFRQTFSELQAPNSDWKCIIGVVLMGISLSLWIHLFIHHKVYVKWPESFSTENRIAQY 166
Query: 150 QRMLDLKVNPIDGL 109
R +DL + P G+
Sbjct: 167 YRQVDLNMQPFSGI 180
>UniRef50_P13073 Cluster: Cytochrome c oxidase subunit 4 isoform 1,
mitochondrial precursor; n=28; Euteleostomi|Rep:
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial
precursor - Homo sapiens (Human)
Length = 169
Score = 135 bits (327), Expect = 9e-31
Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Frame = -3
Query: 468 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 292
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 291 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 112
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+KVNPI G
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQG 155
Query: 111 LASKWDYENNRWK 73
LASKWDYE N WK
Sbjct: 156 LASKWDYEKNEWK 168
>UniRef50_O46584 Cluster: Cytochrome c oxidase subunit 4 isoform 1;
n=7; Eutheria|Rep: Cytochrome c oxidase subunit 4
isoform 1 - Aotus azarai (Southern owl monkey) (Aotus
azarae)
Length = 144
Score = 135 bits (326), Expect = 1e-30
Identities = 63/133 (47%), Positives = 84/133 (63%), Gaps = 1/133 (0%)
Frame = -3
Query: 468 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 292
P+YVDR D+PLP + R + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 11 PSYVDRRDYPLPDVAHVRHLSASQKALKEKEKASWSSLSMDEKVELYRIQFKESFAEMNR 70
Query: 291 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 112
+ EWK VVG A+ A + + K +VY P+P + +E Q +RMLDLKVNP+DG
Sbjct: 71 GSNEWKTVVGAAMFFIGFTAILIILEKRYVYGPLPHTFDKEWVAMQTKRMLDLKVNPVDG 130
Query: 111 LASKWDYENNRWK 73
LASKWDY+ WK
Sbjct: 131 LASKWDYDKKEWK 143
>UniRef50_UPI0000589031 Cluster: PREDICTED: similar to cytochrome c
oxidase subunit IV precursor; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to cytochrome c
oxidase subunit IV precursor - Strongylocentrotus
purpuratus
Length = 162
Score = 132 bits (320), Expect = 6e-30
Identities = 57/133 (42%), Positives = 91/133 (68%), Gaps = 3/133 (2%)
Frame = -3
Query: 462 YVDRPDFPLPAIRFRED---TPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 292
Y DR D+P P RF ++ + +++AL+ KE+GDW+ LT +KK LYR SF +T++E +A
Sbjct: 29 YADRLDYPAPNCRFVQEAELSAEMQALKVKERGDWKALTQADKKELYRMSFNKTYSEMRA 88
Query: 291 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 112
PTGEWK V+G + +++ IY K ++ P+P ++S+E Q+AQL+ + ++ P+ G
Sbjct: 89 PTGEWKYVIGGVCIAIAVSGVIYGFQKAYISPPLPHTMSDEWQEAQLRYQIAIRNGPVTG 148
Query: 111 LASKWDYENNRWK 73
+AS+WDYE N WK
Sbjct: 149 IASQWDYEKNEWK 161
>UniRef50_P80971 Cluster: Cytochrome c oxidase subunit 4 isoform 2,
mitochondrial precursor; n=7; Clupeocephala|Rep:
Cytochrome c oxidase subunit 4 isoform 2, mitochondrial
precursor - Thunnus obesus (Bigeye tuna)
Length = 176
Score = 132 bits (320), Expect = 6e-30
Identities = 68/176 (38%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
Frame = -3
Query: 591 MRRALINAIRVPVCARAGSTGNTELAKIG--DREWVGYGFNGQPNYVDRPDFPLPAIRFR 418
M R +R + RA + +T A++ D E +P Y DR D PLP ++
Sbjct: 1 MLRLTAGRVRSLLAGRATAAFSTSSARMASHDLEVAESVDMSKPLYWDRLDTPLPDRPYK 60
Query: 417 ED-TPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGVVGWALVLSS 241
ED T K+L++KEKG W +L+ EEK LYR FCQT++E + P+ EWK V G +
Sbjct: 61 EDLTAADKSLKQKEKGPWGQLSKEEKIALYRLMFCQTYSEMKQPSSEWKTVFGGIFIFLG 120
Query: 240 LAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASKWDYENNRWK 73
+ ++VY P P + +E + QL+RMLD++VNPI+G ++KWDYE +WK
Sbjct: 121 FTGLVVWWQALYVYPPRPRTFDDEWKAKQLKRMLDMRVNPIEGFSAKWDYEKGQWK 176
>UniRef50_Q71SZ7 Cluster: Cytochrome c oxidase subunit IV; n=5;
Tetrapoda|Rep: Cytochrome c oxidase subunit IV -
Meleagris gallopavo (Common turkey)
Length = 171
Score = 130 bits (315), Expect = 2e-29
Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
Frame = -3
Query: 468 PNYVDRPDFPLPAIRF-REDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 292
P YVDR D PLP F +E + KAL+EKEK W L+++EK LYR F +++AE
Sbjct: 38 PAYVDRRDVPLPEAAFVKELSAQQKALKEKEKPSWTALSVDEKVELYRIKFNESYAEMNK 97
Query: 291 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 112
T EWK V+G L ++ I + K+++Y PIP + S+E Q +RMLD+++NP+ G
Sbjct: 98 GTNEWKTVLGGVLFFLGVSGLILIWQKMYMYGPIPHTFSDEWLSMQTKRMLDMRINPVQG 157
Query: 111 LASKWDYENNRWK 73
++S+WDYE N WK
Sbjct: 158 ISSQWDYEKNEWK 170
>UniRef50_Q9U329 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 175
Score = 130 bits (315), Expect = 2e-29
Identities = 64/147 (43%), Positives = 88/147 (59%)
Frame = -3
Query: 513 KIGDREWVGYGFNGQPNYVDRPDFPLPAIRFREDTPDIKALREKEKGDWRKLTLEEKKTL 334
K RE VGYG NG Y DR D+ PAIRFR++ I +R KE+ DW+ L+ EEKK L
Sbjct: 29 KAAGRELVGYGANGDNIYQDRLDYWYPAIRFRKEDSVIAPIRAKEQADWKNLSAEEKKLL 88
Query: 333 YRASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQ 154
YR SF QT +EF+APTG WK + L + L + + + V VY +P + E ++AQ
Sbjct: 89 YRYSFRQTLSEFEAPTGYWKVISAVILSVLGLCTYYAVLLNVCVYPELPPTFQNEYKEAQ 148
Query: 153 LQRMLDLKVNPIDGLASKWDYENNRWK 73
++R L L+ G + +DYEN +WK
Sbjct: 149 VERALVLEKGQFLGAPTHYDYENKKWK 175
>UniRef50_Q96KJ9 Cluster: Cytochrome c oxidase subunit 4 isoform 2,
mitochondrial precursor; n=12; Theria|Rep: Cytochrome c
oxidase subunit 4 isoform 2, mitochondrial precursor -
Homo sapiens (Human)
Length = 171
Score = 125 bits (301), Expect = 1e-27
Identities = 59/125 (47%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
Frame = -3
Query: 444 FPLPAIRF-REDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGV 268
+P+P F E + +AL+EKEKG W +LT EK LYR F +TFAE + EWK V
Sbjct: 46 YPMPEEPFCTELNAEEQALKEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTV 105
Query: 267 VGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASKWDYE 88
+G AA + +V+V+ P P +L++ER+ QLQRMLD+KVNP+ GLAS+WDYE
Sbjct: 106 MGCVFFFIGFAALVIWWQRVYVFPPKPITLTDERKAQQLQRMLDMKVNPVQGLASRWDYE 165
Query: 87 NNRWK 73
+WK
Sbjct: 166 KKQWK 170
>UniRef50_Q6PH92 Cluster: MGC68573 protein; n=4; Xenopus|Rep:
MGC68573 protein - Xenopus laevis (African clawed frog)
Length = 174
Score = 124 bits (298), Expect = 3e-27
Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
Frame = -3
Query: 462 YVDRPDFPLPAIRFRED-TPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPT 286
Y D FPLP I F+ + K L+E+E+G W++L+ E+K +LY F +T+AE P+
Sbjct: 43 YYDHRVFPLPDIPFQTELNSQEKTLKERERGPWKQLSQEDKISLYHIKFNKTYAEMNKPS 102
Query: 285 GEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLA 106
EWK V G + L I +V+VY P P +L+++ + Q +RMLD+K++PI G A
Sbjct: 103 NEWKTVFGTIFIFFGLTGLIVWWQRVYVYPPKPHTLADDWKAMQARRMLDMKISPIQGFA 162
Query: 105 SKWDYENNRWK 73
SKWDYE N WK
Sbjct: 163 SKWDYEKNEWK 173
>UniRef50_UPI000069ED0B Cluster: Cytochrome c oxidase subunit 4
isoform 2, mitochondrial precursor (EC 1.9.3.1)
(Cytochrome c oxidase subunit IV isoform 2) (COX IV-2).;
n=2; Tetrapoda|Rep: Cytochrome c oxidase subunit 4
isoform 2, mitochondrial precursor (EC 1.9.3.1)
(Cytochrome c oxidase subunit IV isoform 2) (COX IV-2).
- Xenopus tropicalis
Length = 169
Score = 120 bits (290), Expect = 3e-26
Identities = 56/135 (41%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = -3
Query: 471 QPNYVDRPDFPLPAIRF-REDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQ 295
+P Y +R ++PLP + F E P KAL+ KE G W +LT EEK LYR SF Q++AE
Sbjct: 35 KPMYCERREYPLPDVPFVSELNPQQKALKLKENGPWGQLTKEEKLALYRISFNQSYAEMH 94
Query: 294 APT-GEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPI 118
+ + EWK +VG L + +++VY P+P +LSE+ Q +RM+D+++NP+
Sbjct: 95 SGSKSEWKTIVGAVLYFLAFGGLYLWWHRIYVYGPVPHTLSEDWVAMQAKRMIDMRINPV 154
Query: 117 DGLASKWDYENNRWK 73
G +S WDYE +WK
Sbjct: 155 TGFSSHWDYEKKQWK 169
>UniRef50_Q6PBK2 Cluster: LOC402880 protein; n=4; Danio rerio|Rep:
LOC402880 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 171
Score = 113 bits (272), Expect = 4e-24
Identities = 56/133 (42%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
Frame = -3
Query: 468 PNYVDRPDFPLPAIRF-REDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 292
P Y +R D PLP + F R + + K L+EKEKG W +L+ EEK +YR + +F E +
Sbjct: 39 PQYNNRLDTPLPDVPFVRNLSAEQKKLKEKEKGPWTQLSKEEKLAIYRLTHELSFPEMRK 98
Query: 291 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 112
+ EW V+ + +VFVY +P +LS+E + Q QRMLD+KVNPI G
Sbjct: 99 GSKEWMTVLAGVFFFLGFTGLLVWWQRVFVYGDVPHTLSQEWIEKQTQRMLDMKVNPITG 158
Query: 111 LASKWDYENNRWK 73
A KWDYE +WK
Sbjct: 159 FAHKWDYEKKQWK 171
>UniRef50_Q5DF62 Cluster: SJCHGC09183 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC09183 protein - Schistosoma
japonicum (Blood fluke)
Length = 230
Score = 109 bits (262), Expect = 6e-23
Identities = 52/104 (50%), Positives = 68/104 (65%)
Frame = -3
Query: 510 IGDREWVGYGFNGQPNYVDRPDFPLPAIRFREDTPDIKALREKEKGDWRKLTLEEKKTLY 331
IG+RE VG+G NG P Y D FP P+IRFR TP+I LREKE+G+W KLT EE KTLY
Sbjct: 41 IGNREIVGFGRNGVPMYYDDIAFPYPSIRFRNHTPEIAKLREKEQGEWGKLTEEEVKTLY 100
Query: 330 RASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIYMAMKVFVY 199
R SF TFAE AP G+WK + + + S+ Y+ +++ +
Sbjct: 101 RHSFQSTFAEMVAPHGQWKLGLAYGFIFISIGLVFYIYIRLLYH 144
>UniRef50_O46582 Cluster: Cytochrome c oxidase subunit 4 isoform 1;
n=3; Cebidae|Rep: Cytochrome c oxidase subunit 4 isoform
1 - Saimiri sciureus (Common squirrel monkey)
Length = 124
Score = 96.3 bits (229), Expect = 6e-19
Identities = 55/134 (41%), Positives = 73/134 (54%), Gaps = 1/134 (0%)
Frame = -3
Query: 471 QPNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQ 295
+P+YVDR D+PLP + R + KAL+EKEK W L+++EK
Sbjct: 10 RPSYVDRRDYPLPDVAHVRHLSASQKALKEKEKASWSSLSMDEKVE-------------- 55
Query: 294 APTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPID 115
K VVG A+ A + + K +VY P+P + +E Q +RMLDLK+NPID
Sbjct: 56 ------KTVVGAAMFFIGFTAILVILEKRYVYGPLPHTFDKEWVAMQTKRMLDLKMNPID 109
Query: 114 GLASKWDYENNRWK 73
GLASKWDYE WK
Sbjct: 110 GLASKWDYEKKEWK 123
>UniRef50_A7RRF4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 141
Score = 66.1 bits (154), Expect = 8e-10
Identities = 38/114 (33%), Positives = 63/114 (55%)
Frame = -3
Query: 441 PLPAIRFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGVVG 262
P+P R +E D++AL+ KEKG W L+ E++ LY++ F +T E + K VVG
Sbjct: 26 PVPIAR-QEFGSDLEALKAKEKGPWTALSKEDRVALYQSQFPKTLQESKLGEPYAKKVVG 84
Query: 261 WALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASK 100
VL SL+ + ++ ++ P +L+E+ +A ++M + NPI G SK
Sbjct: 85 GVGVLISLSLAFFAFLRTYIGPEPPPTLNEDWIRASEEKMRRQRTNPITGFTSK 138
>UniRef50_P06810 Cluster: Cytochrome c oxidase polypeptide V,
mitochondrial precursor; n=10; Pezizomycotina|Rep:
Cytochrome c oxidase polypeptide V, mitochondrial
precursor - Neurospora crassa
Length = 171
Score = 56.8 bits (131), Expect = 5e-07
Identities = 33/99 (33%), Positives = 54/99 (54%)
Frame = -3
Query: 396 ALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIYMA 217
ALR++ KG+W LTL+EKK Y +F P GE K V+ + + L+ I+
Sbjct: 59 ALRDRMKGNWADLTLQEKKAAYYIAFGPHGPRALPPPGEQKKVLAYTVAGVFLSFVIFAT 118
Query: 216 MKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASK 100
M+ F P P ++++E Q+A + + K +P+ GL S+
Sbjct: 119 MRAFA-KPPPATMTKEWQEATNEFLKAQKSDPLTGLTSE 156
>UniRef50_O93980 Cluster: Cytochrome c oxidase polypeptide V,
mitochondrial precursor; n=8; Trichocomaceae|Rep:
Cytochrome c oxidase polypeptide V, mitochondrial
precursor - Aspergillus niger
Length = 197
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/98 (29%), Positives = 52/98 (53%)
Frame = -3
Query: 393 LREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIYMAM 214
LR++ K DW ++TL+EKK Y SF P GE + L+ ++ I+ +
Sbjct: 85 LRDRMKVDWHQMTLQEKKAAYWISFGPHGPRSVPPKGENLKIFFKVAQLTLVSFGIFYVI 144
Query: 213 KVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASK 100
+F P P ++++E Q+A + K+NPI G++++
Sbjct: 145 HLFA-KPQPKTMTKEWQEASNEYAKQEKINPIYGISAE 181
>UniRef50_Q4P348 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 186
Score = 47.6 bits (108), Expect = 3e-04
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = -3
Query: 399 KALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPT-GEWKGVVGWALVLSSLAAWIY 223
+ L E ++ DW++L+L+EKK Y SF + G+ +G L + + I+
Sbjct: 76 RQLEELQRKDWKELSLDEKKAAYFVSFGPHGPRKPLTSPGQGAKTLGGVLAALGITSGIF 135
Query: 222 MAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASK 100
M+ +P+ ++++E Q+A + L+ K NPI G+AS+
Sbjct: 136 YLMRANGGAPV-KTMTKEWQEASNELALEQKQNPITGIASE 175
>UniRef50_Q86WV2 Cluster: COX4I1 protein; n=2; Homo/Pan/Gorilla
group|Rep: COX4I1 protein - Homo sapiens (Human)
Length = 83
Score = 41.9 bits (94), Expect = 0.015
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -3
Query: 468 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEK 343
P Y+DR D PLP + + + KAL+EKEK W L+++EK
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEK 78
>UniRef50_Q0V3Y7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 173
Score = 41.1 bits (92), Expect = 0.026
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = -3
Query: 396 ALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIYMA 217
+LR++ K DW+++T++EKK Y +F P E + V + + A I+
Sbjct: 56 SLRDRMKVDWKEMTMQEKKAAYYIAFGPHGPRRPPPPDEGRNVFFLSAGVICAAFAIFAF 115
Query: 216 MKVFVYSPI-PDSLSEERQKAQLQRMLDLKVNPIDG 112
++F SPI P ++++E Q+A + + PI G
Sbjct: 116 TRMFA-SPIRPRTMTKEWQEASEEYLKSQGTEPITG 150
>UniRef50_UPI000023ECB4 Cluster: hypothetical protein FG04315.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04315.1 - Gibberella zeae PH-1
Length = 174
Score = 40.7 bits (91), Expect = 0.034
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = -3
Query: 396 ALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIYMA 217
ALR++ + +W +LTL+EKK Y +F + P G V W + + A+
Sbjct: 57 ALRDRMQSNWTELTLQEKKAAYWIAFGPHGPRAEDPPGT-NARVAWGIFIGIAASVGLFG 115
Query: 216 MKVFVYSPIPDSLSEERQK-----AQLQRMLDLKVNPIDGLAS 103
+ P P ++++E Q+ +L R + K +P G+ S
Sbjct: 116 LVRLAAKPAPYTMTQEYQEETNEFLKLTRTQNQKSDPFTGITS 158
>UniRef50_Q5K946 Cluster: Cytochrome c oxidase subunit V, putative;
n=1; Filobasidiella neoformans|Rep: Cytochrome c oxidase
subunit V, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 167
Score = 39.9 bits (89), Expect = 0.060
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = -3
Query: 393 LREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA--PTGEWKGVVGWALVLSSLAAWIYM 220
L + +K +W++LT++EKK Y +F A P K VG A ++ + A +
Sbjct: 61 LEQLQKKNWKELTIDEKKAAYFVAFGPHGPRTPANEPGHSLKVFVGVAALVGTAYAVFEL 120
Query: 219 AMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASK 100
A +P P +++ E Q+ + M +NPI G++S+
Sbjct: 121 ARS--QAAPPPRTMTTEYQEQMNEYMRSQNMNPISGVSSE 158
>UniRef50_O74988 Cluster: Cytochrome c oxidase polypeptide V,
mitochondrial precursor; n=1; Schizosaccharomyces
pombe|Rep: Cytochrome c oxidase polypeptide V,
mitochondrial precursor - Schizosaccharomyces pombe
(Fission yeast)
Length = 174
Score = 37.5 bits (83), Expect = 0.32
Identities = 26/101 (25%), Positives = 45/101 (44%)
Frame = -3
Query: 402 IKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIY 223
I L ++K W L++EEKK Y +F + + + V W V +
Sbjct: 55 ITDLYARQKQPWTTLSIEEKKAAYWIAFGEHGPRAFSHISQ--KTVFWGTVAGLTIGVVL 112
Query: 222 MAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASK 100
+ +P P +++ E Q+ + M + K+NPI G AS+
Sbjct: 113 FGLIRTQAAPSPRTMTREWQEKSNEYMKENKINPISGEASE 153
>UniRef50_A3VH18 Cluster: Putative uncharacterized protein; n=1;
Rhodobacterales bacterium HTCC2654|Rep: Putative
uncharacterized protein - Rhodobacterales bacterium
HTCC2654
Length = 465
Score = 36.3 bits (80), Expect = 0.73
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 358 QFAPITLFFFTESLNVRGVLTEPDGRQGE-VRPVYVVGLAVETIAYPL 498
QF P+ LF + L RGV PD R G+ RPV V G A T+A PL
Sbjct: 264 QFRPLRLFDHADDLGERGV--GPDARGGDPQRPVGVHGAARHTVARPL 309
>UniRef50_A4REI9 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 964
Score = 36.3 bits (80), Expect = 0.73
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = -3
Query: 633 QFKPNSSSKMANYLMR-RALINAIRVPVCARAGSTGNTELAKIGDREWVGYGFNGQPNYV 457
QF+PNS + +A + + LI R + + E D E + N
Sbjct: 842 QFRPNSDADVAYFARQIERLIQTHRHAATTEPEADDSGESTSAEDAESIAQRDNEMEEND 901
Query: 456 DRPDFPLPAIRFREDTPDIKALREKEKGDWRKLTLEEKKTLYR 328
D P F +R + D+ ++++G W KL+ EE + +YR
Sbjct: 902 DAPPFTQYVLREWKRL-DLAEAEQRKRGGWGKLSYEEFEEIYR 943
>UniRef50_UPI0000F1EF70 Cluster: PREDICTED: similar to ubiquitously
transcribed tetratricopeptide repeat, X chromosome; n=2;
Danio rerio|Rep: PREDICTED: similar to ubiquitously
transcribed tetratricopeptide repeat, X chromosome -
Danio rerio
Length = 1390
Score = 33.9 bits (74), Expect = 3.9
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -3
Query: 624 PNSSSKMANYLMRRALINAIRVPVCARAGSTGNTELAKIGDREWVGYGFNGQPNYVDRPD 445
P++ ++ A + + A VP C+ AG+ GNT+ +G+ G G NG Y+ +
Sbjct: 550 PSALTRCAAQPIANGPVPASPVP-CSTAGTLGNTDAVSVGNNHLPGSGSNGNVPYLRQNA 608
Query: 444 FP 439
P
Sbjct: 609 LP 610
>UniRef50_P06336 Cluster: Ig epsilon chain C region; n=37;
Glires|Rep: Ig epsilon chain C region - Mus musculus
(Mouse)
Length = 421
Score = 33.1 bits (72), Expect = 6.8
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -3
Query: 537 STGNTELAKIGDREWV-GYGFNGQPNYVDRPDFPLPAIRFREDTPDIKALREKEKGDWRK 361
+T T + + ++W+ GYG+ VD PDFP P +R TP ++ E +
Sbjct: 263 TTSITSILPVVAKDWIEGYGYQC---IVDHPDFPKPIVRSITKTPGQRSAPEVYVFPPPE 319
Query: 360 LTLEEKKTL 334
E+K+TL
Sbjct: 320 EESEDKRTL 328
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,917,314
Number of Sequences: 1657284
Number of extensions: 17189101
Number of successful extensions: 48869
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 46732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48834
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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