Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11c13
         (370 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   1.6  
AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450 CY...    23   4.8  
Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.             22   8.4  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 307 DATRLHYSNAHAKQTLATLFANRNHSSFYEY 215
           D+  + YS++   Q L+     RNH+  YEY
Sbjct: 295 DSDGIKYSDSLLGQLLSLSIMPRNHNGPYEY 325


>AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450
           CYP4G17 protein.
          Length = 151

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 309 TTQHDYTIQTRTQNKHLQLYLP 244
           T   D  +  RTQN+H   Y+P
Sbjct: 119 TFNPDNFLPERTQNRHYYSYIP 140


>Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 159 ATIKFKLFLKSNVLTNVMAY 218
           ATI+  LF K+N + N + Y
Sbjct: 104 ATIRGSLFAKANAVYNPIVY 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,198
Number of Sequences: 2352
Number of extensions: 5493
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27944475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)