Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11c04
(746 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113387-1|AAM29392.1| 189|Drosophila melanogaster RE06140p pro... 187 2e-47
AY094750-1|AAM11103.1| 189|Drosophila melanogaster GM06185p pro... 187 2e-47
AF199369-1|AAF09579.1| 189|Drosophila melanogaster unknown prot... 187 2e-47
AE014296-1214|AAF50594.1| 189|Drosophila melanogaster CG8612-PA... 187 2e-47
BT024211-1|ABC86273.1| 902|Drosophila melanogaster RE30796p pro... 31 2.2
AE014134-1892|AAF52956.3| 880|Drosophila melanogaster CG6232-PA... 31 2.2
>AY113387-1|AAM29392.1| 189|Drosophila melanogaster RE06140p
protein.
Length = 189
Score = 187 bits (455), Expect = 2e-47
Identities = 88/170 (51%), Positives = 114/170 (67%)
Frame = -2
Query: 535 SIRQAQKKYPKADKKVQAAAESLAARGFLRPTKSWDPPTNINETILKICATCGLNGNSEF 356
S +A K P + A ES+AA+GFLRP K + PP + E I + A+ L + +
Sbjct: 21 SAAKAAKAKPVKTSTISAVGESIAAKGFLRPHKPYSPPADAAERIRTVAASLQLKSD-QL 79
Query: 355 EALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFYKTPVYTTTPFDALKLMDLPKN 176
L KF L AC++E H VPNS +H + TV D+ FY+T V TT PFDALK ++LP+N
Sbjct: 80 GNLSEKFEFLNACFQELQHGVPNSQVHELRTVSDVIAFYQTAVDTTVPFDALKRIELPEN 139
Query: 175 LHVQKDYVRFHPDTDTLFNGVSAFPKSSTIVTGLKARKKYEGYSAKRKWP 26
LH+Q +YVRFHP+TDT F+G +AFPKSST+VTGLK R KYEG+ AKR WP
Sbjct: 140 LHIQYEYVRFHPETDTKFDGKTAFPKSSTLVTGLKYRGKYEGHEAKRSWP 189
>AY094750-1|AAM11103.1| 189|Drosophila melanogaster GM06185p
protein.
Length = 189
Score = 187 bits (455), Expect = 2e-47
Identities = 88/170 (51%), Positives = 114/170 (67%)
Frame = -2
Query: 535 SIRQAQKKYPKADKKVQAAAESLAARGFLRPTKSWDPPTNINETILKICATCGLNGNSEF 356
S +A K P + A ES+AA+GFLRP K + PP + E I + A+ L + +
Sbjct: 21 SAAKAAKAKPVKTSTISAVGESIAAKGFLRPHKPYSPPADAAERIRTVAASLQLKSD-QL 79
Query: 355 EALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFYKTPVYTTTPFDALKLMDLPKN 176
L KF L AC++E H VPNS +H + TV D+ FY+T V TT PFDALK ++LP+N
Sbjct: 80 GNLSEKFEFLNACFQELQHGVPNSQVHELRTVSDVIAFYQTAVDTTVPFDALKRIELPEN 139
Query: 175 LHVQKDYVRFHPDTDTLFNGVSAFPKSSTIVTGLKARKKYEGYSAKRKWP 26
LH+Q +YVRFHP+TDT F+G +AFPKSST+VTGLK R KYEG+ AKR WP
Sbjct: 140 LHIQYEYVRFHPETDTKFDGKTAFPKSSTLVTGLKYRGKYEGHEAKRSWP 189
>AF199369-1|AAF09579.1| 189|Drosophila melanogaster unknown
protein.
Length = 189
Score = 187 bits (455), Expect = 2e-47
Identities = 88/170 (51%), Positives = 114/170 (67%)
Frame = -2
Query: 535 SIRQAQKKYPKADKKVQAAAESLAARGFLRPTKSWDPPTNINETILKICATCGLNGNSEF 356
S +A K P + A ES+AA+GFLRP K + PP + E I + A+ L + +
Sbjct: 21 SAAKAAKAKPVKTSTISAVGESIAAKGFLRPHKPYSPPADAAERIRTVAASLQLKSD-QL 79
Query: 355 EALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFYKTPVYTTTPFDALKLMDLPKN 176
L KF L AC++E H VPNS +H + TV D+ FY+T V TT PFDALK ++LP+N
Sbjct: 80 GNLSEKFEFLNACFQELQHGVPNSQVHELRTVSDVIAFYQTAVDTTVPFDALKRIELPEN 139
Query: 175 LHVQKDYVRFHPDTDTLFNGVSAFPKSSTIVTGLKARKKYEGYSAKRKWP 26
LH+Q +YVRFHP+TDT F+G +AFPKSST+VTGLK R KYEG+ AKR WP
Sbjct: 140 LHIQYEYVRFHPETDTKFDGKTAFPKSSTLVTGLKYRGKYEGHEAKRSWP 189
>AE014296-1214|AAF50594.1| 189|Drosophila melanogaster CG8612-PA
protein.
Length = 189
Score = 187 bits (455), Expect = 2e-47
Identities = 88/170 (51%), Positives = 114/170 (67%)
Frame = -2
Query: 535 SIRQAQKKYPKADKKVQAAAESLAARGFLRPTKSWDPPTNINETILKICATCGLNGNSEF 356
S +A K P + A ES+AA+GFLRP K + PP + E I + A+ L + +
Sbjct: 21 SAAKAAKAKPVKTSTISAVGESIAAKGFLRPHKPYSPPADAAERIRTVAASLQLKSD-QL 79
Query: 355 EALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFYKTPVYTTTPFDALKLMDLPKN 176
L KF L AC++E H VPNS +H + TV D+ FY+T V TT PFDALK ++LP+N
Sbjct: 80 GNLSEKFEFLNACFQELQHGVPNSQVHELRTVSDVIAFYQTAVDTTVPFDALKRIELPEN 139
Query: 175 LHVQKDYVRFHPDTDTLFNGVSAFPKSSTIVTGLKARKKYEGYSAKRKWP 26
LH+Q +YVRFHP+TDT F+G +AFPKSST+VTGLK R KYEG+ AKR WP
Sbjct: 140 LHIQYEYVRFHPETDTKFDGKTAFPKSSTLVTGLKYRGKYEGHEAKRSWP 189
>BT024211-1|ABC86273.1| 902|Drosophila melanogaster RE30796p
protein.
Length = 902
Score = 30.7 bits (66), Expect = 2.2
Identities = 28/119 (23%), Positives = 57/119 (47%)
Frame = -2
Query: 367 NSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFYKTPVYTTTPFDALKLMD 188
N++ E L+ + T K + + +S + ++ + T +K+ + TTT ++ D
Sbjct: 100 NNKEEYLENE-TTSKISNKSDEKVLKSSTIISLNATNPSTSTFKSVLETTT-LPSVTTKD 157
Query: 187 LPKNLHVQKDYVRFHPDTDTLFNGVSAFPKSSTIVTGLKARKKYEGYSAKRKWP*FNTC 11
L ++ +V R P + +F+ + P+ +T T KA+KK Y KW +++C
Sbjct: 158 LFESGNVAT--TRQTPKVEEVFSSPNP-PQEATSSTSKKAKKKVYPYPRWDKWSDWSSC 213
>AE014134-1892|AAF52956.3| 880|Drosophila melanogaster CG6232-PA
protein.
Length = 880
Score = 30.7 bits (66), Expect = 2.2
Identities = 28/119 (23%), Positives = 57/119 (47%)
Frame = -2
Query: 367 NSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFYKTPVYTTTPFDALKLMD 188
N++ E L+ + T K + + +S + ++ + T +K+ + TTT ++ D
Sbjct: 78 NNKEEYLENE-TTSKISNKSDEKVLKSSTIISLNATNPSTSTFKSVLETTT-LPSVTTKD 135
Query: 187 LPKNLHVQKDYVRFHPDTDTLFNGVSAFPKSSTIVTGLKARKKYEGYSAKRKWP*FNTC 11
L ++ +V R P + +F+ + P+ +T T KA+KK Y KW +++C
Sbjct: 136 LFESGNVAT--TRQTPKVEEVFSSPNP-PQEATSSTSKKAKKKVYPYPRWDKWSDWSSC 191
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,909,269
Number of Sequences: 53049
Number of extensions: 712070
Number of successful extensions: 1842
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1838
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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