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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11b21
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr...    34   0.12 
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr...    34   0.12 
AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical ...    33   0.36 
AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase...    32   0.47 
AF025462-1|AAN72423.1| 1068|Caenorhabditis elegans Phospholipase...    32   0.47 
U58749-2|AAK18876.1|  355|Caenorhabditis elegans Hypothetical pr...    31   0.83 
Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p...    31   1.1  
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z79695-4|CAB01969.3|  374|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AC024826-10|AAM97977.1|  435|Caenorhabditis elegans Hypothetical...    30   1.9  
AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical ...    30   1.9  
AL023835-6|CAA19483.1|  144|Caenorhabditis elegans Hypothetical ...    30   2.5  
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p...    29   3.3  
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.      29   3.3  
Z83244-7|CAB05829.1|  318|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z81552-4|CAB04488.2|  765|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z81028-2|CAB02694.1|  996|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z27081-3|CAH19085.1|  869|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z27081-2|CAA81607.2|  937|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U18546-1|AAB02615.1|  996|Caenorhabditis elegans Na,K-ATPase alp...    29   4.4  
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali...    29   4.4  
Z68342-5|CAA92774.2|  416|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AF490976-1|AAQ06434.1|  157|Caenorhabditis elegans Y74C10AM.1b p...    29   5.8  
AF490975-1|AAQ06433.1|  703|Caenorhabditis elegans ABC7 protein ...    29   5.8  
U29488-10|AAK93843.1|  813|Caenorhabditis elegans Dnaj domain (p...    28   7.7  

>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical protein
            F59A2.6 protein.
          Length = 1133

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
 Frame = -3

Query: 570  EGERDDLRDKIESVLKHVKKLNTNSEKFMVTHET----FKNDVGNRFEQFELRLNELDAK 403
            EGE  +L D+IE +   VKKL   +E   V  +T       ++    +Q    LN+ + +
Sbjct: 910  EGEAKELTDRIEGLEAEVKKLTAANETKAVKADTDARKVVRELQKEVKQLYNELNDKNQQ 969

Query: 402  LNMLQ-SAEKLKTAIVTESKNGTVTFPRDITKHQHLAIFS 286
             +M+Q    +LKT+  T ++NG +   + + +    + FS
Sbjct: 970  FDMVQEELTRLKTSKET-AENGQLQVQKQMDEEDRRSEFS 1008


>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical protein
            F59A2.6 protein.
          Length = 1133

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
 Frame = -3

Query: 570  EGERDDLRDKIESVLKHVKKLNTNSEKFMVTHET----FKNDVGNRFEQFELRLNELDAK 403
            EGE  +L D+IE +   VKKL   +E   V  +T       ++    +Q    LN+ + +
Sbjct: 910  EGEAKELTDRIEGLEAEVKKLTAANETKAVKADTDARKVVRELQKEVKQLYNELNDKNQQ 969

Query: 402  LNMLQ-SAEKLKTAIVTESKNGTVTFPRDITKHQHLAIFS 286
             +M+Q    +LKT+  T ++NG +   + + +    + FS
Sbjct: 970  FDMVQEELTRLKTSKET-AENGQLQVQKQMDEEDRRSEFS 1008


>AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.1 protein.
          Length = 704

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 22/102 (21%), Positives = 47/102 (46%)
 Frame = -3

Query: 546 DKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQSAEKLKT 367
           D +  + K V+ L TN ++  +T  +FK D  N    FE+  ++L + +     AE   +
Sbjct: 96  DTVTRISKLVESLKTNLDQ--LTEHSFKEDRPNSVLFFEITHDDLKSSIKKYSDAEGSMS 153

Query: 366 AIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIKLAFVLGQ 241
           ++ +  K        +I + + + I  ER     ++  ++G+
Sbjct: 154 SLGSVKKISVAPKISEIVEEEDVEILEERKHVEGEIMRIIGE 195


>AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase c
            like protein 1,isoform a protein.
          Length = 1075

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
 Frame = -3

Query: 639  GLLKILMRLNFDNKSNALLH-LQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFK 463
            G L   ++ +F+   N + H + T  + D L  KIE  ++ + + +    K         
Sbjct: 942  GTLPDQLQRSFNKLKNLIAHCVTTLSQSDQLLSKIEDSIRRISECHEELSKLCAEAGLKG 1001

Query: 462  NDVGNRFEQFELRLNELDAKLNMLQSAEKLKTAIVTE 352
                   E F   L  L A+LN++  +++    +VT+
Sbjct: 1002 QKATRAAENFTWNLRLLKAQLNLMNKSQEEAQDVVTQ 1038


>AF025462-1|AAN72423.1| 1068|Caenorhabditis elegans Phospholipase c
            like protein 1,isoform b protein.
          Length = 1068

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
 Frame = -3

Query: 639  GLLKILMRLNFDNKSNALLH-LQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFK 463
            G L   ++ +F+   N + H + T  + D L  KIE  ++ + + +    K         
Sbjct: 935  GTLPDQLQRSFNKLKNLIAHCVTTLSQSDQLLSKIEDSIRRISECHEELSKLCAEAGLKG 994

Query: 462  NDVGNRFEQFELRLNELDAKLNMLQSAEKLKTAIVTE 352
                   E F   L  L A+LN++  +++    +VT+
Sbjct: 995  QKATRAAENFTWNLRLLKAQLNLMNKSQEEAQDVVTQ 1031


>U58749-2|AAK18876.1|  355|Caenorhabditis elegans Hypothetical
           protein B0496.5 protein.
          Length = 355

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 4   LIT-IIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHT 180
           LIT  +HV +L  F  +    I+  +     +SYF N+ +FI+  F +T    QG WV  
Sbjct: 89  LITDYLHVLLLAAFAIDRLIQIIFPVSYGKFYSYFINWKLFILLIFASTGLSVQG-WVFP 147

Query: 181 VIEHFH 198
           +   F+
Sbjct: 148 LDSRFN 153


>Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical
           protein T09F5.16 protein.
          Length = 311

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +1

Query: 691 LLVKNNFV*MVNLIAVPIAIKYVVVRNFKTFAKSITL*NFAFVSLCTYLYLKLCVLHLNE 870
           ++V+N ++  +    + I + Y+   N  T+   I L    FV LC  LY+ + +     
Sbjct: 138 VVVRNLYICFIIKSVMLIILPYIYTANILTYTTLILLFQNLFVFLCALLYIPILISIRKA 197

Query: 871 SHLT 882
            HL+
Sbjct: 198 RHLS 201


>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = -3

Query: 309 HQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHP-NPLLAIQCINEK 133
           H HL+ +   +    KL +    E  F+ +++ F D +  LYDG     PL+A    N+K
Sbjct: 626 HSHLSAYMLFLCTAEKLPWFGDAENMFKLKEVFFNDPLNYLYDGCADFVPLVACFIANKK 685

Query: 132 LYDKHYKIRKIAKRVI 85
           L  + + + K++K +I
Sbjct: 686 LTYETF-MEKMSKYLI 700


>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = -3

Query: 309 HQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHP-NPLLAIQCINEK 133
           H HL+ +   +    KL +    E  F+ +++ F D +  LYDG     PL+A    N+K
Sbjct: 626 HSHLSAYMLFLCTAEKLPWFGDAENMFKLKEVFFNDPLNYLYDGCADFVPLVACFIANKK 685

Query: 132 LYDKHYKIRKIAKRVI 85
           L  + + + K++K +I
Sbjct: 686 LTYETF-MEKMSKYLI 700


>Z79695-4|CAB01969.3|  374|Caenorhabditis elegans Hypothetical
           protein F27D4.4a protein.
          Length = 374

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -3

Query: 813 RKILQCNRFCKGLEIAHDDILDCNWDSDQVYHLNEIIFHKQKSK 682
           +K  + N +    E+  D+  + NWDSD+   LNE++  K K+K
Sbjct: 120 QKTAKKNLYADSREVEKDEETNENWDSDK---LNEVVNKKNKNK 160


>AC024826-10|AAM97977.1|  435|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3c protein.
          Length = 435

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 549 ANHHARLQFEGAATRCFCCQNLTASKFSTTPAWSRTMR 662
           A H    Q    AT+CF   N+      T PAW   +R
Sbjct: 263 AQHAGHSQIPSIATQCFLLSNMFDPSKETEPAWDHDIR 300


>AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3a protein.
          Length = 580

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 549 ANHHARLQFEGAATRCFCCQNLTASKFSTTPAWSRTMR 662
           A H    Q    AT+CF   N+      T PAW   +R
Sbjct: 408 AQHAGHSQIPSIATQCFLLSNMFDPSKETEPAWDHDIR 445


>AL023835-6|CAA19483.1|  144|Caenorhabditis elegans Hypothetical
           protein Y37A1B.6 protein.
          Length = 144

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
 Frame = +1

Query: 19  HVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVN---TLNCQQGIWVHTVIE 189
           + F+L YF  N+FN   + IH   TF   ++F  F++E + +     N  + ++ H+V  
Sbjct: 23  YCFMLHYFGKNMFNSNFADIH--NTFLMVASFEQFVLEGYYSIDRASNFPENLYFHSVTG 80

Query: 190 HFHVVFKAH 216
              +V K H
Sbjct: 81  --KIVHKPH 87


>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
            C35C5.1 protein.
          Length = 2962

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 543  KIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRF 442
            K+E   + + KL  N +K  ++H++ KND   RF
Sbjct: 1738 KLERDFEEIVKLIQNEKKLALSHKSHKNDENRRF 1771


>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
            protein C35C5.1 protein.
          Length = 2962

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 543  KIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRF 442
            K+E   + + KL  N +K  ++H++ KND   RF
Sbjct: 1738 KLERDFEEIVKLIQNEKKLALSHKSHKNDENRRF 1771


>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
          Length = 2962

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 543  KIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRF 442
            K+E   + + KL  N +K  ++H++ KND   RF
Sbjct: 1738 KLERDFEEIVKLIQNEKKLALSHKSHKNDENRRF 1771


>Z83244-7|CAB05829.1|  318|Caenorhabditis elegans Hypothetical
           protein W06F12.3 protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = -3

Query: 738 DSDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGER 559
           D DQVYH  +++    +S++    +G  F T    L+++ R    N  N ++ L++   R
Sbjct: 246 DQDQVYHAKQLLLRNFQSRK----MGQNFGTFPRALELIKRTETPNYENFIVILKSCSSR 301


>Z81552-4|CAB04488.2|  765|Caenorhabditis elegans Hypothetical
           protein F56G4.6 protein.
          Length = 765

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 392 SMLSLASSSFKRNSNCSNLLPTSFLNVSWVT 484
           ++L L   S K   NCS +LP SF  +  +T
Sbjct: 109 TLLKLCKKSIKTTGNCSKILPISFRELPGLT 139


>Z81028-2|CAB02694.1|  996|Caenorhabditis elegans Hypothetical
           protein B0365.3 protein.
          Length = 996

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +2

Query: 311 LVMSRGNVTVPFLLSVTMAVFNFSADCSMLSLASSSFKRNSNCSNLLPTSFLNVSWVTIN 490
           +V  +G   VP  L V  A F F  D S L+  S    R+ +C+N  P    N+++ + N
Sbjct: 168 IVEVKGGDRVPADLRVVSA-FGFKVDNSSLTGESEPQSRSPDCTNENPLETRNIAFFSTN 226


>Z27081-3|CAH19085.1|  869|Caenorhabditis elegans Hypothetical
           protein M01A8.2b protein.
          Length = 869

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
 Frame = -3

Query: 477 HETFKNDVGNRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRDITKHQHL 298
           +E  +  +GN  EQ+E +++EL     ML  A K     V + KN      + + ++   
Sbjct: 497 NEDNERKLGNISEQYEKKVSELGDLKKMLDEARKKFEEDVEQMKNSN----QQVIRNHAN 552

Query: 297 AIFSERIDDRIKLAFVLGQ-ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKL--Y 127
           A+ S +     ++A    + ER+F + + R E ++  + +  H      + C++EK+   
Sbjct: 553 AVESLQKTHETQIAEKNKEFERNFEEERARREAEVCAM-NNRHQK---VVACLDEKISEA 608

Query: 126 DKHYKIRKIAKRVIDV----DCTH 67
           +K  +   + K+V+      DC H
Sbjct: 609 EKQCEQLNVDKKVLQAALANDCDH 632


>Z27081-2|CAA81607.2|  937|Caenorhabditis elegans Hypothetical
           protein M01A8.2a protein.
          Length = 937

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
 Frame = -3

Query: 477 HETFKNDVGNRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRDITKHQHL 298
           +E  +  +GN  EQ+E +++EL     ML  A K     V + KN      + + ++   
Sbjct: 565 NEDNERKLGNISEQYEKKVSELGDLKKMLDEARKKFEEDVEQMKNSN----QQVIRNHAN 620

Query: 297 AIFSERIDDRIKLAFVLGQ-ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKL--Y 127
           A+ S +     ++A    + ER+F + + R E ++  + +  H      + C++EK+   
Sbjct: 621 AVESLQKTHETQIAEKNKEFERNFEEERARREAEVCAM-NNRHQK---VVACLDEKISEA 676

Query: 126 DKHYKIRKIAKRVIDV----DCTH 67
           +K  +   + K+V+      DC H
Sbjct: 677 EKQCEQLNVDKKVLQAALANDCDH 700


>U18546-1|AAB02615.1|  996|Caenorhabditis elegans Na,K-ATPase alpha
           subunit protein.
          Length = 996

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +2

Query: 311 LVMSRGNVTVPFLLSVTMAVFNFSADCSMLSLASSSFKRNSNCSNLLPTSFLNVSWVTIN 490
           +V  +G   VP  L V  A F F  D S L+  S    R+ +C+N  P    N+++ + N
Sbjct: 168 IVEVKGGDRVPADLRVVSA-FGFKVDNSSLTGESEPQSRSPDCTNENPLETRNIAFFSTN 226


>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
           pathway homologprotein 1 protein.
          Length = 1451

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -3

Query: 288 SERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVL 187
           S++  D +K+A+ +G+E   ++R+   EDD E L
Sbjct: 182 SQKAKDEMKMAYQVGREEALQQRRNDLEDDEENL 215


>Z68342-5|CAA92774.2|  416|Caenorhabditis elegans Hypothetical
           protein F38E11.6a protein.
          Length = 416

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = -3

Query: 558 DDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQ 436
           D+L  +I +V +++   N + + F+V   +FKN    +F++
Sbjct: 303 DNLTAQISAVYRYIASHNRHDDNFLVVVPSFKNQDAEKFKR 343


>AF490976-1|AAQ06434.1|  157|Caenorhabditis elegans Y74C10AM.1b
           protein protein.
          Length = 157

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 242 WPKTKASLMRSSMRSENMAKCWCLVMSRGNVTVPFLLSVTMAVFNFSA 385
           WPK K  + R  +    +A C  +     NV+VPFLL   +  +N  A
Sbjct: 88  WPKDKPEIKRRVL----VALCLLIAAKLANVSVPFLLRDIVNYYNGKA 131


>AF490975-1|AAQ06433.1|  703|Caenorhabditis elegans ABC7 protein
           protein.
          Length = 703

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 242 WPKTKASLMRSSMRSENMAKCWCLVMSRGNVTVPFLLSVTMAVFNFSA 385
           WPK K  + R  +    +A C  +     NV+VPFLL   +  +N  A
Sbjct: 88  WPKDKPEIKRRVL----VALCLLIAAKLANVSVPFLLRDIVNYYNGKA 131


>U29488-10|AAK93843.1|  813|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 8 protein.
          Length = 813

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +1

Query: 277 DAFRKYGQMLVFGNVARKRHRAIFAFRYDGGFQFFGRLQHVKFGVEFVQTQFKLLK 444
           D F  +  +  F + A +R R+ + F   GGF F   +   K+ + + Q QFK+L+
Sbjct: 83  DRFGTFDDVKQFEDNA-ERARSFYGFGGFGGFGFDESVFEYKYRMSYQQYQFKILE 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,975,708
Number of Sequences: 27780
Number of extensions: 441321
Number of successful extensions: 1738
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1737
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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