Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11b16
(874 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456820-1|CAG33101.1| 264|Homo sapiens PSMB4 protein. 259 8e-69
BC017307-1|AAH17307.1| 264|Homo sapiens proteasome (prosome, ma... 259 8e-69
BC010098-1|AAH10098.1| 264|Homo sapiens proteasome (prosome, ma... 259 8e-69
BC008314-1|AAH08314.1| 264|Homo sapiens proteasome (prosome, ma... 259 8e-69
AL589764-1|CAI16806.1| 264|Homo sapiens proteasome (prosome, ma... 259 8e-69
D26600-1|BAA05647.1| 264|Homo sapiens proteasome subunit HsN3 p... 258 2e-68
BT006917-1|AAP35563.1| 264|Homo sapiens proteasome (prosome, ma... 258 2e-68
BC017486-1|AAH17486.1| 264|Homo sapiens proteasome (prosome, ma... 258 2e-68
BC017451-1|AAH17451.1| 264|Homo sapiens proteasome (prosome, ma... 258 2e-68
BC012168-1|AAH12168.1| 264|Homo sapiens proteasome (prosome, ma... 258 2e-68
BC011768-1|AAH11768.1| 264|Homo sapiens proteasome (prosome, ma... 258 2e-68
BC010088-1|AAH10088.1| 264|Homo sapiens proteasome (prosome, ma... 258 2e-68
BC000331-1|AAH00331.1| 264|Homo sapiens proteasome (prosome, ma... 258 2e-68
S71381-1|AAB31085.1| 233|Homo sapiens prosome beta-subunit prot... 240 5e-63
D00761-1|BAA00658.1| 241|Homo sapiens proteasome subunit C5 pro... 60 1e-08
BT019720-1|AAV38525.1| 241|Homo sapiens proteasome (prosome, ma... 60 1e-08
BC020807-1|AAH20807.1| 241|Homo sapiens proteasome (prosome, ma... 60 1e-08
AL031259-8|CAA20287.1| 241|Homo sapiens proteasome (prosome, ma... 60 1e-08
AL008628-2|CAI19555.1| 241|Homo sapiens proteasome (prosome, ma... 60 1e-08
BC000508-1|AAH00508.1| 241|Homo sapiens proteasome (prosome, ma... 58 4e-08
AK223193-1|BAD96913.1| 241|Homo sapiens proteasome beta 1 subun... 57 1e-07
AB209078-1|BAD92315.1| 196|Homo sapiens proteasome beta 1 subun... 52 2e-06
D26599-1|BAA05646.1| 201|Homo sapiens proteasome subunit HsC7-I... 49 3e-05
CR456862-1|CAG33143.1| 201|Homo sapiens PSMB2 protein. 49 3e-05
BT007137-1|AAP35801.1| 201|Homo sapiens proteasome (prosome, ma... 49 3e-05
BC107901-1|AAI07902.1| 201|Homo sapiens proteasome (prosome, ma... 49 3e-05
BC105126-1|AAI05127.1| 201|Homo sapiens proteasome (prosome, ma... 49 3e-05
BC101836-1|AAI01837.1| 201|Homo sapiens proteasome (prosome, ma... 49 3e-05
AL357035-1|CAI22074.1| 201|Homo sapiens proteasome (prosome, ma... 49 3e-05
AL354864-3|CAC36031.2| 201|Homo sapiens proteasome (prosome, ma... 49 3e-05
AL157951-2|CAI23521.1| 201|Homo sapiens proteasome (prosome, ma... 49 3e-05
AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subun... 48 6e-05
D29012-1|BAA06098.1| 239|Homo sapiens proteasome subunit Y prot... 38 0.047
CR457065-1|CAG33346.1| 239|Homo sapiens PSMB6 protein. 38 0.047
BT009809-1|AAP88811.1| 239|Homo sapiens proteasome (prosome, ma... 38 0.047
BC000835-1|AAH00835.1| 239|Homo sapiens proteasome (prosome, ma... 38 0.047
D26598-1|BAA05645.1| 205|Homo sapiens proteasome subunit HsC10-... 37 0.083
BC013008-1|AAH13008.1| 205|Homo sapiens proteasome (prosome, ma... 37 0.083
BC002570-1|AAH02570.1| 205|Homo sapiens proteasome (prosome, ma... 37 0.083
D38048-1|BAA07238.1| 277|Homo sapiens proteasome subunit z prot... 36 0.19
CR456721-1|CAG33002.1| 277|Homo sapiens PSMB7 protein. 36 0.19
BC017116-1|AAH17116.2| 256|Homo sapiens PSMB7 protein protein. 36 0.19
BC000509-1|AAH00509.1| 277|Homo sapiens proteasome (prosome, ma... 36 0.19
AL137846-3|CAI10873.1| 277|Homo sapiens proteasome (prosome, ma... 36 0.19
AK223356-1|BAD97076.1| 277|Homo sapiens proteasome beta 7 subun... 36 0.19
AK223007-1|BAD96727.1| 277|Homo sapiens proteasome beta 7 subun... 36 0.19
Z14977-1|CAA78700.1| 219|Homo sapiens MHC-encoded proteasome su... 34 0.77
X87344-4|CAA60784.1| 219|Homo sapiens LMP2 protein. 34 0.77
X66401-1|CAA47024.1| 219|Homo sapiens LMP2 protein. 34 0.77
U01025-1|AAC50154.1| 209|Homo sapiens LMP-2 protein. 34 0.77
S75169-1|AAC60646.1| 209|Homo sapiens proteasome LMP2.s protein. 34 0.77
CR541656-1|CAG46457.1| 219|Homo sapiens PSMB9 protein. 34 0.77
BC065513-1|AAH65513.1| 219|Homo sapiens proteasome (prosome, ma... 34 0.77
AL935043-7|CAI18627.1| 219|Homo sapiens proteasome (prosome, ma... 34 0.77
AL671681-13|CAI17715.1| 219|Homo sapiens proteasome (prosome, m... 34 0.77
AL669918-9|CAI18141.1| 219|Homo sapiens proteasome (prosome, ma... 34 0.77
X62741-1|CAA44603.1| 219|Homo sapiens RING12 protein. 33 1.0
BX088556-5|CAM26264.1| 219|Homo sapiens proteasome (prosome, ma... 33 1.0
AL137846-4|CAI10874.1| 210|Homo sapiens proteasome (prosome, ma... 31 4.1
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 31 5.5
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 31 5.5
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 31 5.5
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 30 9.5
DQ533874-1|ABF83431.1| 1378|Homo sapiens ROBO2 isoform b protein. 30 9.5
DQ533873-1|ABF83430.1| 1394|Homo sapiens ROBO2 isoform a protein. 30 9.5
BC146772-1|AAI46773.1| 1378|Homo sapiens roundabout, axon guidan... 30 9.5
AK055336-1|BAB70904.1| 140|Homo sapiens protein ( Homo sapiens ... 30 9.5
AB046788-1|BAB13394.1| 1380|Homo sapiens KIAA1568 protein protein. 30 9.5
>CR456820-1|CAG33101.1| 264|Homo sapiens PSMB4 protein.
Length = 264
Score = 259 bits (635), Expect = 8e-69
Identities = 124/259 (47%), Positives = 171/259 (66%), Gaps = 3/259 (1%)
Frame = -1
Query: 784 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 608
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 607 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 428
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 427 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYED 248
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEA 179
Query: 247 AVISNGLGAYMATPLLRDAVDKGP-LDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTA 71
++ G GAY+A PLLR+ ++K P L Q A +V + M VL+YRDAR++ R+Q+ VT
Sbjct: 180 PSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQIATVTE 239
Query: 70 EGIKITDE-ELKHDWSLAH 17
+G++I + +W +AH
Sbjct: 240 KGVEIEGPLSTETNWDIAH 258
>BC017307-1|AAH17307.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 259 bits (635), Expect = 8e-69
Identities = 124/259 (47%), Positives = 171/259 (66%), Gaps = 3/259 (1%)
Frame = -1
Query: 784 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 608
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 607 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 428
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 427 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYED 248
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEA 179
Query: 247 AVISNGLGAYMATPLLRDAVDKGP-LDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTA 71
++ G GAY+A PLLR+ ++K P L Q A +V + M VL+YRDAR++ R+Q+ VT
Sbjct: 180 PSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQIATVTE 239
Query: 70 EGIKITDE-ELKHDWSLAH 17
+G++I + +W +AH
Sbjct: 240 KGVEIEGPLSTETNWDIAH 258
>BC010098-1|AAH10098.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 259 bits (635), Expect = 8e-69
Identities = 124/259 (47%), Positives = 171/259 (66%), Gaps = 3/259 (1%)
Frame = -1
Query: 784 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 608
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 607 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 428
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 427 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYED 248
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEA 179
Query: 247 AVISNGLGAYMATPLLRDAVDKGP-LDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTA 71
++ G GAY+A PLLR+ ++K P L Q A +V + M VL+YRDAR++ R+Q+ VT
Sbjct: 180 PSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQIATVTE 239
Query: 70 EGIKITDE-ELKHDWSLAH 17
+G++I + +W +AH
Sbjct: 240 KGVEIEGPLSTETNWDIAH 258
>BC008314-1|AAH08314.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 259 bits (635), Expect = 8e-69
Identities = 124/259 (47%), Positives = 171/259 (66%), Gaps = 3/259 (1%)
Frame = -1
Query: 784 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 608
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 607 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 428
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 427 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYED 248
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEA 179
Query: 247 AVISNGLGAYMATPLLRDAVDKGP-LDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTA 71
++ G GAY+A PLLR+ ++K P L Q A +V + M VL+YRDAR++ R+Q+ VT
Sbjct: 180 PSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQIATVTE 239
Query: 70 EGIKITDE-ELKHDWSLAH 17
+G++I + +W +AH
Sbjct: 240 KGVEIEGPLSTETNWDIAH 258
>AL589764-1|CAI16806.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 259 bits (635), Expect = 8e-69
Identities = 124/259 (47%), Positives = 171/259 (66%), Gaps = 3/259 (1%)
Frame = -1
Query: 784 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 608
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 607 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 428
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 427 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYED 248
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEA 179
Query: 247 AVISNGLGAYMATPLLRDAVDKGP-LDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTA 71
++ G GAY+A PLLR+ ++K P L Q A +V + M VL+YRDAR++ R+Q+ VT
Sbjct: 180 PSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQIATVTE 239
Query: 70 EGIKITDE-ELKHDWSLAH 17
+G++I + +W +AH
Sbjct: 240 KGVEIEGPLSTETNWDIAH 258
>D26600-1|BAA05647.1| 264|Homo sapiens proteasome subunit HsN3
protein.
Length = 264
Score = 258 bits (632), Expect = 2e-68
Identities = 124/259 (47%), Positives = 170/259 (65%), Gaps = 3/259 (1%)
Frame = -1
Query: 784 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 608
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 607 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 428
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 427 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYED 248
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEA 179
Query: 247 AVISNGLGAYMATPLLRDAVDKGP-LDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTA 71
++ G GAY+A PLLR+ ++K P L Q A +V + M VL+YRDAR++ R+Q VT
Sbjct: 180 PSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQTATVTE 239
Query: 70 EGIKITDE-ELKHDWSLAH 17
+G++I + +W +AH
Sbjct: 240 KGVEIEGPLSTETNWDIAH 258
>BT006917-1|AAP35563.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 258 bits (632), Expect = 2e-68
Identities = 124/259 (47%), Positives = 170/259 (65%), Gaps = 3/259 (1%)
Frame = -1
Query: 784 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 608
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 607 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 428
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 427 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYED 248
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEA 179
Query: 247 AVISNGLGAYMATPLLRDAVDKGP-LDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTA 71
++ G GAY+A PLLR+ ++K P L Q A +V + M VL+YRDAR++ R+Q VT
Sbjct: 180 PSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQTATVTE 239
Query: 70 EGIKITDE-ELKHDWSLAH 17
+G++I + +W +AH
Sbjct: 240 KGVEIEGPLSTETNWDIAH 258
>BC017486-1|AAH17486.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 258 bits (632), Expect = 2e-68
Identities = 124/259 (47%), Positives = 170/259 (65%), Gaps = 3/259 (1%)
Frame = -1
Query: 784 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 608
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 607 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 428
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 427 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYED 248
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEA 179
Query: 247 AVISNGLGAYMATPLLRDAVDKGP-LDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTA 71
++ G GAY+A PLLR+ ++K P L Q A +V + M VL+YRDAR++ R+Q VT
Sbjct: 180 PSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQTATVTE 239
Query: 70 EGIKITDE-ELKHDWSLAH 17
+G++I + +W +AH
Sbjct: 240 KGVEIEGPLSTETNWDIAH 258
>BC017451-1|AAH17451.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 258 bits (632), Expect = 2e-68
Identities = 124/259 (47%), Positives = 170/259 (65%), Gaps = 3/259 (1%)
Frame = -1
Query: 784 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 608
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 607 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 428
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 427 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYED 248
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEA 179
Query: 247 AVISNGLGAYMATPLLRDAVDKGP-LDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTA 71
++ G GAY+A PLLR+ ++K P L Q A +V + M VL+YRDAR++ R+Q VT
Sbjct: 180 PSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQTATVTE 239
Query: 70 EGIKITDE-ELKHDWSLAH 17
+G++I + +W +AH
Sbjct: 240 KGVEIEGPLSTETNWDIAH 258
>BC012168-1|AAH12168.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 258 bits (632), Expect = 2e-68
Identities = 124/259 (47%), Positives = 170/259 (65%), Gaps = 3/259 (1%)
Frame = -1
Query: 784 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 608
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 607 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 428
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 427 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYED 248
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEA 179
Query: 247 AVISNGLGAYMATPLLRDAVDKGP-LDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTA 71
++ G GAY+A PLLR+ ++K P L Q A +V + M VL+YRDAR++ R+Q VT
Sbjct: 180 PSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQTATVTE 239
Query: 70 EGIKITDE-ELKHDWSLAH 17
+G++I + +W +AH
Sbjct: 240 KGVEIEGPLSTETNWDIAH 258
>BC011768-1|AAH11768.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 258 bits (632), Expect = 2e-68
Identities = 124/259 (47%), Positives = 170/259 (65%), Gaps = 3/259 (1%)
Frame = -1
Query: 784 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 608
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 607 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 428
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 427 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYED 248
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEA 179
Query: 247 AVISNGLGAYMATPLLRDAVDKGP-LDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTA 71
++ G GAY+A PLLR+ ++K P L Q A +V + M VL+YRDAR++ R+Q VT
Sbjct: 180 PSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQTATVTE 239
Query: 70 EGIKITDE-ELKHDWSLAH 17
+G++I + +W +AH
Sbjct: 240 KGVEIEGPLSTETNWDIAH 258
>BC010088-1|AAH10088.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 258 bits (632), Expect = 2e-68
Identities = 124/259 (47%), Positives = 170/259 (65%), Gaps = 3/259 (1%)
Frame = -1
Query: 784 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 608
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 607 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 428
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 427 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYED 248
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEA 179
Query: 247 AVISNGLGAYMATPLLRDAVDKGP-LDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTA 71
++ G GAY+A PLLR+ ++K P L Q A +V + M VL+YRDAR++ R+Q VT
Sbjct: 180 PSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQTATVTE 239
Query: 70 EGIKITDE-ELKHDWSLAH 17
+G++I + +W +AH
Sbjct: 240 KGVEIEGPLSTETNWDIAH 258
>BC000331-1|AAH00331.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 258 bits (632), Expect = 2e-68
Identities = 124/259 (47%), Positives = 170/259 (65%), Gaps = 3/259 (1%)
Frame = -1
Query: 784 AFMGDTMNPTPLWQNGPSPGAFYNFPGNA-STIAPSRHGVQDFTAHSASPITTTTTVIGV 608
AF+G LW GP+PG FY P S + P+ + + +P+ T T+V+GV
Sbjct: 3 AFLGSRSG---LWAGGPAPGQFYRIPSTPDSFMDPASALYRGPITRTQNPMVTGTSVLGV 59
Query: 607 KFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDE 428
KF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQYLK ++ Q +IDE
Sbjct: 60 KFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDE 119
Query: 427 SCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYED 248
+GDG PR++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE
Sbjct: 120 ELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEA 179
Query: 247 AVISNGLGAYMATPLLRDAVDKGP-LDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTA 71
++ G GAY+A PLLR+ ++K P L Q A +V + M VL+YRDAR++ R+Q VT
Sbjct: 180 PSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQTATVTE 239
Query: 70 EGIKITDE-ELKHDWSLAH 17
+G++I + +W +AH
Sbjct: 240 KGVEIEGPLSTETNWDIAH 258
>S71381-1|AAB31085.1| 233|Homo sapiens prosome beta-subunit
protein.
Length = 233
Score = 240 bits (587), Expect = 5e-63
Identities = 110/211 (52%), Positives = 150/211 (71%), Gaps = 2/211 (0%)
Frame = -1
Query: 643 SPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQY 464
+P+ T T+V+GVKF+ G VIA D LGSYGSLARFR+ R+M+VN+ +LG GDYADFQY
Sbjct: 17 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 76
Query: 463 LKDIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFL 284
LK ++ Q +IDE +GDG PR++H WLTR +Y++RSKM+PLWN+ V+ G DGE FL
Sbjct: 77 LKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFL 136
Query: 283 GAVDKLGTAYEDAVISNGLGAYMATPLLRDAVDKGP-LDQETAIAVVRKSMEVLFYRDAR 107
G VD LG AYE ++ G GAY+A PLLR+ ++K P L Q A +V + M VL+YRDAR
Sbjct: 137 GYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDAR 196
Query: 106 AFQRYQLGVVTAEGIKITDE-ELKHDWSLAH 17
++ R+Q VT +G++I + +W +AH
Sbjct: 197 SYNRFQTATVTEKGVEIEGPLSTETNWDIAH 227
>D00761-1|BAA00658.1| 241|Homo sapiens proteasome subunit C5
protein.
Length = 241
Score = 60.1 bits (139), Expect = 1e-08
Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 9/243 (3%)
Frame = -1
Query: 733 SPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGS 554
S A Y+ PG + P R + + T++ + + ++A DT S G
Sbjct: 3 SSTAMYSAPGRDLGMEPHR-AAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGF 61
Query: 553 LARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESCVGDGLQLKPRSLHCWL 374
RD P+ K+ D ++GC G + D L II+ + + + + ++ L
Sbjct: 62 SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR-LKMYKHSNNKAMTTGAIAAML 120
Query: 373 TRVLYNKRSKMDPLWNSYVVAGI-QDGEPFLGAVDKLGTAYEDAVISNGLGAYMATPLLR 197
+ +LY++R P + ++ G+ ++G+ + + D +G+ D+ + G + M PLL
Sbjct: 121 STILYSRR--FFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLD 178
Query: 196 DA--------VDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTAEGIKITDEEL 41
+ V+ PL + A+ +V+ RD ++ +VT EGI+ L
Sbjct: 179 NQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSL 238
Query: 40 KHD 32
+ D
Sbjct: 239 RKD 241
>BT019720-1|AAV38525.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 60.1 bits (139), Expect = 1e-08
Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 9/243 (3%)
Frame = -1
Query: 733 SPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGS 554
S A Y+ PG + P R + + T++ + + ++A DT S G
Sbjct: 3 SSTAMYSAPGRDLGMEPHR-AAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGF 61
Query: 553 LARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESCVGDGLQLKPRSLHCWL 374
RD P+ K+ D ++GC G + D L II+ + + + + ++ L
Sbjct: 62 SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR-LKMYKHSNNKAMTTGAIAAML 120
Query: 373 TRVLYNKRSKMDPLWNSYVVAGI-QDGEPFLGAVDKLGTAYEDAVISNGLGAYMATPLLR 197
+ +LY++R P + ++ G+ ++G+ + + D +G+ D+ + G + M PLL
Sbjct: 121 STILYSRR--FFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLD 178
Query: 196 DA--------VDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTAEGIKITDEEL 41
+ V+ PL + A+ +V+ RD ++ +VT EGI+ L
Sbjct: 179 NQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSL 238
Query: 40 KHD 32
+ D
Sbjct: 239 RKD 241
>BC020807-1|AAH20807.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 60.1 bits (139), Expect = 1e-08
Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 9/243 (3%)
Frame = -1
Query: 733 SPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGS 554
S A Y+ PG + P R + + T++ + + ++A DT S G
Sbjct: 3 SSTAMYSAPGRDLGMEPHR-AAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGF 61
Query: 553 LARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESCVGDGLQLKPRSLHCWL 374
RD P+ K+ D ++GC G + D L II+ + + + + ++ L
Sbjct: 62 SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR-LKMYKHSNNKAMTTGAIAAML 120
Query: 373 TRVLYNKRSKMDPLWNSYVVAGI-QDGEPFLGAVDKLGTAYEDAVISNGLGAYMATPLLR 197
+ +LY++R P + ++ G+ ++G+ + + D +G+ D+ + G + M PLL
Sbjct: 121 STILYSRR--FFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLD 178
Query: 196 DA--------VDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTAEGIKITDEEL 41
+ V+ PL + A+ +V+ RD ++ +VT EGI+ L
Sbjct: 179 NQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSL 238
Query: 40 KHD 32
+ D
Sbjct: 239 RKD 241
>AL031259-8|CAA20287.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 60.1 bits (139), Expect = 1e-08
Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 9/243 (3%)
Frame = -1
Query: 733 SPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGS 554
S A Y+ PG + P R + + T++ + + ++A DT S G
Sbjct: 3 SSTAMYSAPGRDLGMEPHR-AAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGF 61
Query: 553 LARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESCVGDGLQLKPRSLHCWL 374
RD P+ K+ D ++GC G + D L II+ + + + + ++ L
Sbjct: 62 SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR-LKMYKHSNNKAMTTGAIAAML 120
Query: 373 TRVLYNKRSKMDPLWNSYVVAGI-QDGEPFLGAVDKLGTAYEDAVISNGLGAYMATPLLR 197
+ +LY++R P + ++ G+ ++G+ + + D +G+ D+ + G + M PLL
Sbjct: 121 STILYSRR--FFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLD 178
Query: 196 DA--------VDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTAEGIKITDEEL 41
+ V+ PL + A+ +V+ RD ++ +VT EGI+ L
Sbjct: 179 NQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSL 238
Query: 40 KHD 32
+ D
Sbjct: 239 RKD 241
>AL008628-2|CAI19555.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 60.1 bits (139), Expect = 1e-08
Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 9/243 (3%)
Frame = -1
Query: 733 SPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGS 554
S A Y+ PG + P R + + T++ + + ++A DT S G
Sbjct: 3 SSTAMYSAPGRDLGMEPHR-AAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGF 61
Query: 553 LARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESCVGDGLQLKPRSLHCWL 374
RD P+ K+ D ++GC G + D L II+ + + + + ++ L
Sbjct: 62 SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR-LKMYKHSNNKAMTTGAIAAML 120
Query: 373 TRVLYNKRSKMDPLWNSYVVAGI-QDGEPFLGAVDKLGTAYEDAVISNGLGAYMATPLLR 197
+ +LY++R P + ++ G+ ++G+ + + D +G+ D+ + G + M PLL
Sbjct: 121 STILYSRR--FFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLD 178
Query: 196 DA--------VDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTAEGIKITDEEL 41
+ V+ PL + A+ +V+ RD ++ +VT EGI+ L
Sbjct: 179 NQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSL 238
Query: 40 KHD 32
+ D
Sbjct: 239 RKD 241
>BC000508-1|AAH00508.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 58.0 bits (134), Expect = 4e-08
Identities = 47/206 (22%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Frame = -1
Query: 622 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQ 443
T++ + + ++A DT S G RD P+ K+ D ++GC G + D L II+
Sbjct: 39 TILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEA 98
Query: 442 KIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGI-QDGEPFLGAVDKL 266
+ + + + ++ L+ +LY++R P + ++ G+ ++G+ + + D +
Sbjct: 99 R-LKMYKHSNNKAMTTGAIAAMLSTILYSRR--FFPYYVYNIIGGLDEEGKGAVYSFDPV 155
Query: 265 GTAYEDAVISNGLGAYMATPLLRDA--------VDKGPLDQETAIAVVRKSMEVLFYRDA 110
G+ D+ + G + M PLL + V+ PL + A+ +V+ RD
Sbjct: 156 GSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDV 215
Query: 109 RAFQRYQLGVVTAEGIKITDEELKHD 32
++ +VT EGI+ L+ D
Sbjct: 216 YTGDALRICIVTKEGIREETVSLRKD 241
>AK223193-1|BAD96913.1| 241|Homo sapiens proteasome beta 1 subunit
variant protein.
Length = 241
Score = 56.8 bits (131), Expect = 1e-07
Identities = 46/206 (22%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Frame = -1
Query: 622 TVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQ 443
T++ + + ++A DT S G RD P+ ++ D ++GC G + D L II+
Sbjct: 39 TILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYRLTDKTVIGCSGFHGDCLTLTKIIEA 98
Query: 442 KIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGI-QDGEPFLGAVDKL 266
+ + + + ++ L+ +LY++R P + ++ G+ ++G+ + + D +
Sbjct: 99 R-LKMYKHSNNKAMTTGAIAAMLSTILYSRR--FFPYYVYNIIGGLDEEGKGAVYSFDPV 155
Query: 265 GTAYEDAVISNGLGAYMATPLLRDA--------VDKGPLDQETAIAVVRKSMEVLFYRDA 110
G+ D+ + G + M PLL + V+ PL + A+ +V+ RD
Sbjct: 156 GSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDV 215
Query: 109 RAFQRYQLGVVTAEGIKITDEELKHD 32
++ +VT EGI+ L+ D
Sbjct: 216 YTGDALRICIVTKEGIREETVSLRKD 241
>AB209078-1|BAD92315.1| 196|Homo sapiens proteasome beta 1 subunit
variant protein.
Length = 196
Score = 52.4 bits (120), Expect = 2e-06
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 1/179 (0%)
Frame = -1
Query: 733 SPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGS 554
S A Y+ PG + P R + + T++ + + ++A DT S G
Sbjct: 8 SSTAMYSAPGRDLGMEPHR-AAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGF 66
Query: 553 LARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESCVGDGLQLKPRSLHCWL 374
RD P+ K+ D ++GC G + D L II+ + + + + ++ L
Sbjct: 67 SIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR-LKMYKHSNNKAMTTGAIAAML 125
Query: 373 TRVLYNKRSKMDPLWNSYVVAGI-QDGEPFLGAVDKLGTAYEDAVISNGLGAYMATPLL 200
+ +LY++R P + ++ G+ ++G+ + + D +G+ D+ + G + M PLL
Sbjct: 126 STILYSRR--FFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLL 182
>D26599-1|BAA05646.1| 201|Homo sapiens proteasome subunit HsC7-I
protein.
Length = 201
Score = 48.8 bits (111), Expect = 3e-05
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Frame = -1
Query: 619 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQK 440
+IG++ ++A D + + + D ++ K+++ ILL C G+ D + I QK
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI-QK 62
Query: 439 IIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGE-PFLGAVDKLG 263
+ + +G +L P + + R L + P + ++AG + E P L +D L
Sbjct: 63 NVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLA 122
Query: 262 TAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLG 83
+ ++G GA++ +L D + +E A+ ++RK +E L R + +
Sbjct: 123 ALAKAPFAAHGYGAFLTLSIL-DRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVR 181
Query: 82 VVTAEGIKITD 50
++ GI D
Sbjct: 182 IIDKNGIHDLD 192
>CR456862-1|CAG33143.1| 201|Homo sapiens PSMB2 protein.
Length = 201
Score = 48.8 bits (111), Expect = 3e-05
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Frame = -1
Query: 619 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQK 440
+IG++ ++A D + + + D ++ K+++ ILL C G+ D + I QK
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI-QK 62
Query: 439 IIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGE-PFLGAVDKLG 263
+ + +G +L P + + R L + P + ++AG + E P L +D L
Sbjct: 63 NVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLA 122
Query: 262 TAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLG 83
+ ++G GA++ +L D + +E A+ ++RK +E L R + +
Sbjct: 123 ALAKAPFAAHGYGAFLTLSIL-DRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVR 181
Query: 82 VVTAEGIKITD 50
++ GI D
Sbjct: 182 IIDKNGIHDLD 192
>BT007137-1|AAP35801.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 48.8 bits (111), Expect = 3e-05
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Frame = -1
Query: 619 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQK 440
+IG++ ++A D + + + D ++ K+++ ILL C G+ D + I QK
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI-QK 62
Query: 439 IIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGE-PFLGAVDKLG 263
+ + +G +L P + + R L + P + ++AG + E P L +D L
Sbjct: 63 NVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLA 122
Query: 262 TAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLG 83
+ ++G GA++ +L D + +E A+ ++RK +E L R + +
Sbjct: 123 ALAKAPFAAHGYGAFLTLSIL-DRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVR 181
Query: 82 VVTAEGIKITD 50
++ GI D
Sbjct: 182 IIDKNGIHDLD 192
>BC107901-1|AAI07902.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 48.8 bits (111), Expect = 3e-05
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Frame = -1
Query: 619 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQK 440
+IG++ ++A D + + + D ++ K+++ ILL C G+ D + I QK
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI-QK 62
Query: 439 IIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGE-PFLGAVDKLG 263
+ + +G +L P + + R L + P + ++AG + E P L +D L
Sbjct: 63 NVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLA 122
Query: 262 TAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLG 83
+ ++G GA++ +L D + +E A+ ++RK +E L R + +
Sbjct: 123 ALAKAPFAAHGYGAFLTLSIL-DRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVR 181
Query: 82 VVTAEGIKITD 50
++ GI D
Sbjct: 182 IIDKNGIHDLD 192
>BC105126-1|AAI05127.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 48.8 bits (111), Expect = 3e-05
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Frame = -1
Query: 619 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQK 440
+IG++ ++A D + + + D ++ K+++ ILL C G+ D + I QK
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI-QK 62
Query: 439 IIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGE-PFLGAVDKLG 263
+ + +G +L P + + R L + P + ++AG + E P L +D L
Sbjct: 63 NVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLA 122
Query: 262 TAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLG 83
+ ++G GA++ +L D + +E A+ ++RK +E L R + +
Sbjct: 123 ALAKAPFAAHGYGAFLTLSIL-DRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVR 181
Query: 82 VVTAEGIKITD 50
++ GI D
Sbjct: 182 IIDKNGIHDLD 192
>BC101836-1|AAI01837.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 48.8 bits (111), Expect = 3e-05
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Frame = -1
Query: 619 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQK 440
+IG++ ++A D + + + D ++ K+++ ILL C G+ D + I QK
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI-QK 62
Query: 439 IIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGE-PFLGAVDKLG 263
+ + +G +L P + + R L + P + ++AG + E P L +D L
Sbjct: 63 NVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLA 122
Query: 262 TAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLG 83
+ ++G GA++ +L D + +E A+ ++RK +E L R + +
Sbjct: 123 ALAKAPFAAHGYGAFLTLSIL-DRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVR 181
Query: 82 VVTAEGIKITD 50
++ GI D
Sbjct: 182 IIDKNGIHDLD 192
>AL357035-1|CAI22074.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 48.8 bits (111), Expect = 3e-05
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Frame = -1
Query: 619 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQK 440
+IG++ ++A D + + + D ++ K+++ ILL C G+ D + I QK
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI-QK 62
Query: 439 IIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGE-PFLGAVDKLG 263
+ + +G +L P + + R L + P + ++AG + E P L +D L
Sbjct: 63 NVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLA 122
Query: 262 TAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLG 83
+ ++G GA++ +L D + +E A+ ++RK +E L R + +
Sbjct: 123 ALAKAPFAAHGYGAFLTLSIL-DRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVR 181
Query: 82 VVTAEGIKITD 50
++ GI D
Sbjct: 182 IIDKNGIHDLD 192
>AL354864-3|CAC36031.2| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 48.8 bits (111), Expect = 3e-05
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Frame = -1
Query: 619 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQK 440
+IG++ ++A D + + + D ++ K+++ ILL C G+ D + I QK
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI-QK 62
Query: 439 IIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGE-PFLGAVDKLG 263
+ + +G +L P + + R L + P + ++AG + E P L +D L
Sbjct: 63 NVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLA 122
Query: 262 TAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLG 83
+ ++G GA++ +L D + +E A+ ++RK +E L R + +
Sbjct: 123 ALAKAPFAAHGYGAFLTLSIL-DRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVR 181
Query: 82 VVTAEGIKITD 50
++ GI D
Sbjct: 182 IIDKNGIHDLD 192
>AL157951-2|CAI23521.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 48.8 bits (111), Expect = 3e-05
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Frame = -1
Query: 619 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQK 440
+IG++ ++A D + + + D ++ K+++ ILL C G+ D + I QK
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI-QK 62
Query: 439 IIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGE-PFLGAVDKLG 263
+ + +G +L P + + R L + P + ++AG + E P L +D L
Sbjct: 63 NVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLA 122
Query: 262 TAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLG 83
+ ++G GA++ +L D + +E A+ ++RK +E L R + +
Sbjct: 123 ALAKAPFAAHGYGAFLTLSIL-DRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVR 181
Query: 82 VVTAEGIKITD 50
++ GI D
Sbjct: 182 IIDKNGIHDLD 192
>AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subunit
variant protein.
Length = 249
Score = 47.6 bits (108), Expect = 6e-05
Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Frame = -1
Query: 640 PITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYL 461
P T +IG++ ++A D + + + D ++ K+++ ILL C G+ D
Sbjct: 29 PSATMEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQF 88
Query: 460 KDIIQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGE-PFL 284
+ I QK + + +G +L P + + R L + P + ++AG + E P L
Sbjct: 89 AEYI-QKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPAL 147
Query: 283 GAVDKLGTAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSME 131
+D L + ++G GA++ +L D + +E A+ ++RK +E
Sbjct: 148 YYMDYLAALAKAPFAAHGYGAFLTLSIL-DRYYTPTISRERAVELLRKCLE 197
>D29012-1|BAA06098.1| 239|Homo sapiens proteasome subunit Y
protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.047
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -1
Query: 673 GVQDFTAHSAS-PITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILL 497
G + FT S ++T TT++ V+FD G V+ D+ + GS R ++ ++D I
Sbjct: 18 GPEAFTPDWESREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFC 77
Query: 496 GCGGDYADFQYLKDIIQQKI 437
G AD Q + D + ++
Sbjct: 78 CRSGSAADTQAVADAVTYQL 97
>CR457065-1|CAG33346.1| 239|Homo sapiens PSMB6 protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.047
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -1
Query: 673 GVQDFTAHSAS-PITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILL 497
G + FT S ++T TT++ V+FD G V+ D+ + GS R ++ ++D I
Sbjct: 18 GPEAFTPDWESREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFC 77
Query: 496 GCGGDYADFQYLKDIIQQKI 437
G AD Q + D + ++
Sbjct: 78 CRSGSAADTQAVADAVTYQL 97
>BT009809-1|AAP88811.1| 239|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 6 protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.047
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -1
Query: 673 GVQDFTAHSAS-PITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILL 497
G + FT S ++T TT++ V+FD G V+ D+ + GS R ++ ++D I
Sbjct: 18 GPEAFTPDWESREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFC 77
Query: 496 GCGGDYADFQYLKDIIQQKI 437
G AD Q + D + ++
Sbjct: 78 CRSGSAADTQAVADAVTYQL 97
>BC000835-1|AAH00835.1| 239|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 6 protein.
Length = 239
Score = 37.9 bits (84), Expect = 0.047
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -1
Query: 673 GVQDFTAHSAS-PITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILL 497
G + FT S ++T TT++ V+FD G V+ D+ + GS R ++ ++D I
Sbjct: 18 GPEAFTPDWESREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFC 77
Query: 496 GCGGDYADFQYLKDIIQQKI 437
G AD Q + D + ++
Sbjct: 78 CRSGSAADTQAVADAVTYQL 97
>D26598-1|BAA05645.1| 205|Homo sapiens proteasome subunit HsC10-II
protein.
Length = 205
Score = 37.1 bits (82), Expect = 0.083
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Frame = -1
Query: 598 KGCV-IAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESC 422
K CV IA D + D ++ + D + +G G D Q + ++ ++ +
Sbjct: 17 KNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRL-NLYE 75
Query: 421 VGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGI--QDGEPFLGAVDKLG--TAY 254
+ +G Q+KP +L + +LY KR P + V+AG+ + +PF+ ++D +G
Sbjct: 76 LKEGRQIKPYTLMSMVANLLYEKR--FGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVT 133
Query: 253 EDAVIS 236
+D V+S
Sbjct: 134 DDFVVS 139
>BC013008-1|AAH13008.1| 205|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 3 protein.
Length = 205
Score = 37.1 bits (82), Expect = 0.083
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Frame = -1
Query: 598 KGCV-IAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESC 422
K CV IA D + D ++ + D + +G G D Q + ++ ++ +
Sbjct: 17 KNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRL-NLYE 75
Query: 421 VGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGI--QDGEPFLGAVDKLG--TAY 254
+ +G Q+KP +L + +LY KR P + V+AG+ + +PF+ ++D +G
Sbjct: 76 LKEGRQIKPYTLMSMVANLLYEKR--FGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVT 133
Query: 253 EDAVIS 236
+D V+S
Sbjct: 134 DDFVVS 139
>BC002570-1|AAH02570.1| 205|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 3 protein.
Length = 205
Score = 37.1 bits (82), Expect = 0.083
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Frame = -1
Query: 598 KGCV-IAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDESC 422
K CV IA D + D ++ + D + +G G D Q + ++ ++ +
Sbjct: 17 KNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRL-NLYE 75
Query: 421 VGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGI--QDGEPFLGAVDKLG--TAY 254
+ +G Q+KP +L + +LY KR P + V+AG+ + +PF+ ++D +G
Sbjct: 76 LKEGRQIKPYTLMSMVANLLYEKR--FGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVT 133
Query: 253 EDAVIS 236
+D V+S
Sbjct: 134 DDFVVS 139
>D38048-1|BAA07238.1| 277|Homo sapiens proteasome subunit z
protein.
Length = 277
Score = 35.9 bits (79), Expect = 0.19
Identities = 34/186 (18%), Positives = 80/186 (43%)
Frame = -1
Query: 631 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 452
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 101
Query: 451 IQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVD 272
I ++ + G + + + L ++L+ + + + V+ G+ P L ++
Sbjct: 102 ISSN-LELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGA---ALVLGGVDVTGPHLYSIY 157
Query: 271 KLGTAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRY 92
G+ + ++ G G+ A + D + +++E A +V +++ + D +
Sbjct: 158 PHGSTDKLPYVTMGSGSLAAMAVFEDKF-RPDMEEEEAKNLVSEAIAAGIFNDLGSGSNI 216
Query: 91 QLGVVT 74
L V++
Sbjct: 217 DLCVIS 222
>CR456721-1|CAG33002.1| 277|Homo sapiens PSMB7 protein.
Length = 277
Score = 35.9 bits (79), Expect = 0.19
Identities = 34/186 (18%), Positives = 80/186 (43%)
Frame = -1
Query: 631 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 452
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 101
Query: 451 IQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVD 272
I ++ + G + + + L ++L+ + + + V+ G+ P L ++
Sbjct: 102 ISSN-LELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGA---ALVLGGVDVTGPHLYSIY 157
Query: 271 KLGTAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRY 92
G+ + ++ G G+ A + D + +++E A +V +++ + D +
Sbjct: 158 PHGSTDKLPYVTMGSGSLAAMAVFEDKF-RPDMEEEEAKNLVSEAIAAGIFNDLGSGSNI 216
Query: 91 QLGVVT 74
L V++
Sbjct: 217 DLCVIS 222
>BC017116-1|AAH17116.2| 256|Homo sapiens PSMB7 protein protein.
Length = 256
Score = 35.9 bits (79), Expect = 0.19
Identities = 34/186 (18%), Positives = 80/186 (43%)
Frame = -1
Query: 631 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 452
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 21 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 80
Query: 451 IQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVD 272
I ++ + G + + + L ++L+ + + + V+ G+ P L ++
Sbjct: 81 ISSN-LELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGA---ALVLGGVDVTGPHLYSIY 136
Query: 271 KLGTAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRY 92
G+ + ++ G G+ A + D + +++E A +V +++ + D +
Sbjct: 137 PHGSTDKLPYVTMGSGSLAAMAVFEDKF-RPDMEEEEAKNLVSEAIAAGIFNDLGSGSNI 195
Query: 91 QLGVVT 74
L V++
Sbjct: 196 DLCVIS 201
>BC000509-1|AAH00509.1| 277|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 7 protein.
Length = 277
Score = 35.9 bits (79), Expect = 0.19
Identities = 34/186 (18%), Positives = 80/186 (43%)
Frame = -1
Query: 631 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 452
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 101
Query: 451 IQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVD 272
I ++ + G + + + L ++L+ + + + V+ G+ P L ++
Sbjct: 102 ISSN-LELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGA---ALVLGGVDVTGPHLYSIY 157
Query: 271 KLGTAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRY 92
G+ + ++ G G+ A + D + +++E A +V +++ + D +
Sbjct: 158 PHGSTDKLPYVTMGSGSLAAMAVFEDKF-RPDMEEEEAKNLVSEAIAAGIFNDLGSGSNI 216
Query: 91 QLGVVT 74
L V++
Sbjct: 217 DLCVIS 222
>AL137846-3|CAI10873.1| 277|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 7 protein.
Length = 277
Score = 35.9 bits (79), Expect = 0.19
Identities = 34/186 (18%), Positives = 80/186 (43%)
Frame = -1
Query: 631 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 452
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 101
Query: 451 IQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVD 272
I ++ + G + + + L ++L+ + + + V+ G+ P L ++
Sbjct: 102 ISSN-LELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGA---ALVLGGVDVTGPHLYSIY 157
Query: 271 KLGTAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRY 92
G+ + ++ G G+ A + D + +++E A +V +++ + D +
Sbjct: 158 PHGSTDKLPYVTMGSGSLAAMAVFEDKF-RPDMEEEEAKNLVSEAIAAGIFNDLGSGSNI 216
Query: 91 QLGVVT 74
L V++
Sbjct: 217 DLCVIS 222
>AK223356-1|BAD97076.1| 277|Homo sapiens proteasome beta 7 subunit
proprotein variant protein.
Length = 277
Score = 35.9 bits (79), Expect = 0.19
Identities = 34/186 (18%), Positives = 80/186 (43%)
Frame = -1
Query: 631 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 452
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 101
Query: 451 IQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVD 272
I ++ + G + + + L ++L+ + + + V+ G+ P L ++
Sbjct: 102 ISSN-LELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGA---ALVLGGVDVTGPHLYSIY 157
Query: 271 KLGTAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRY 92
G+ + ++ G G+ A + D + +++E A +V +++ + D +
Sbjct: 158 PHGSTDKLPYVTMGSGSLAAMAVFEDKF-RPDMEEEEAKNLVSEAIAAGIFNDLGSGSNI 216
Query: 91 QLGVVT 74
L V++
Sbjct: 217 DLCVIS 222
>AK223007-1|BAD96727.1| 277|Homo sapiens proteasome beta 7 subunit
proprotein variant protein.
Length = 277
Score = 35.9 bits (79), Expect = 0.19
Identities = 34/186 (18%), Positives = 80/186 (43%)
Frame = -1
Query: 631 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 452
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 101
Query: 451 IQQKIIDESCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVD 272
I ++ + G + + + L ++L+ + + + V+ G+ P L ++
Sbjct: 102 ISSN-LELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGA---ALVLGGVDVTGPHLYSIY 157
Query: 271 KLGTAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRY 92
G+ + ++ G G+ A + D + +++E A +V +++ + D +
Sbjct: 158 PHGSTDKLPYVTMGSGSLAAMAVFEDKF-RPDMEEEEAKNLVSEAIAAGIFNDLGSGSNI 216
Query: 91 QLGVVT 74
L V++
Sbjct: 217 DLCVIS 222
>Z14977-1|CAA78700.1| 219|Homo sapiens MHC-encoded proteasome
subunit gene protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 646 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 467
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 466 YLKDI 452
+ D+
Sbjct: 74 AVADM 78
>X87344-4|CAA60784.1| 219|Homo sapiens LMP2 protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 646 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 467
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 466 YLKDI 452
+ D+
Sbjct: 74 AVADM 78
>X66401-1|CAA47024.1| 219|Homo sapiens LMP2 protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 646 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 467
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 466 YLKDI 452
+ D+
Sbjct: 74 AVADM 78
>U01025-1|AAC50154.1| 209|Homo sapiens LMP-2 protein.
Length = 209
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 646 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 467
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 4 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 63
Query: 466 YLKDI 452
+ D+
Sbjct: 64 AVADM 68
>S75169-1|AAC60646.1| 209|Homo sapiens proteasome LMP2.s protein.
Length = 209
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 646 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 467
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 4 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 63
Query: 466 YLKDI 452
+ D+
Sbjct: 64 AVADM 68
>CR541656-1|CAG46457.1| 219|Homo sapiens PSMB9 protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 646 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 467
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 466 YLKDI 452
+ D+
Sbjct: 74 AVADM 78
>BC065513-1|AAH65513.1| 219|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 9 (large multifunctional
pe protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 646 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 467
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 466 YLKDI 452
+ D+
Sbjct: 74 AVADM 78
>AL935043-7|CAI18627.1| 219|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 9 (large multifunctional
pe protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 646 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 467
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 466 YLKDI 452
+ D+
Sbjct: 74 AVADM 78
>AL671681-13|CAI17715.1| 219|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 9 (large multifunctional
pe protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 646 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 467
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 466 YLKDI 452
+ D+
Sbjct: 74 AVADM 78
>AL669918-9|CAI18141.1| 219|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 9 (large multifunctional
pe protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 646 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 467
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQ 73
Query: 466 YLKDI 452
+ D+
Sbjct: 74 AVADM 78
>X62741-1|CAA44603.1| 219|Homo sapiens RING12 protein.
Length = 219
Score = 33.5 bits (73), Expect = 1.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 646 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 467
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHEHIYCALSGSAADAQ 73
Query: 466 YLKDI 452
+ D+
Sbjct: 74 AVADM 78
>BX088556-5|CAM26264.1| 219|Homo sapiens proteasome (prosome,
macropain) subunit beta typea 1 protein.
Length = 219
Score = 33.5 bits (73), Expect = 1.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 646 ASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQ 467
A + T TT++ V+FD G V+ D+ S G R ++ +++ I G AD Q
Sbjct: 14 AGEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHEHIYCALSGSAADAQ 73
Query: 466 YLKDI 452
+ D+
Sbjct: 74 AVADM 78
>AL137846-4|CAI10874.1| 210|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 7 protein.
Length = 210
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = -1
Query: 631 TTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDI 452
T TT+ GV + G V+ DT + G + ++C ++ ++ I G AD +
Sbjct: 42 TGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQL 101
Query: 451 IQQKI 437
I +
Sbjct: 102 ISSNL 106
>BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein.
Length = 252
Score = 31.1 bits (67), Expect = 5.5
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = -1
Query: 766 MNPTPLWQNGPSPGAFYNFPGNASTIAPS---RHGVQDFTAHSASPITTTTTVIGV 608
M P P WQ G P F P P RH A ++ + TTT +GV
Sbjct: 181 MRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVGV 236
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 31.1 bits (67), Expect = 5.5
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = -1
Query: 766 MNPTPLWQNGPSPGAFYNFPGNASTIAPS---RHGVQDFTAHSASPITTTTTVIGV 608
M P P WQ G P F P P RH A ++ + TTT +GV
Sbjct: 431 MRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVGV 486
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 31.1 bits (67), Expect = 5.5
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = -1
Query: 766 MNPTPLWQNGPSPGAFYNFPGNASTIAPS---RHGVQDFTAHSASPITTTTTVIGV 608
M P P WQ G P F P P RH A ++ + TTT +GV
Sbjct: 210 MRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVGV 265
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 30.3 bits (65), Expect = 9.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 433 DESCVGDGLQLKPRSLHCW 377
+ S G+GL+L P S+HCW
Sbjct: 264 NSSEAGEGLELPPNSIHCW 282
>DQ533874-1|ABF83431.1| 1378|Homo sapiens ROBO2 isoform b protein.
Length = 1378
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 85 RAGSVGTREHLCRKAPPYFYVQPQ*QFL--GPEVLYPLRPSAEESPCKLLARSRSQHLHM 258
R G + L +APP F V+P+ Q + G V +P P + SQ+L
Sbjct: 298 RVGKMEASATLTVRAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNL-- 355
Query: 259 LFP 267
LFP
Sbjct: 356 LFP 358
>DQ533873-1|ABF83430.1| 1394|Homo sapiens ROBO2 isoform a protein.
Length = 1394
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 85 RAGSVGTREHLCRKAPPYFYVQPQ*QFL--GPEVLYPLRPSAEESPCKLLARSRSQHLHM 258
R G + L +APP F V+P+ Q + G V +P P + SQ+L
Sbjct: 314 RVGKMEASATLTVRAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNL-- 371
Query: 259 LFP 267
LFP
Sbjct: 372 LFP 374
>BC146772-1|AAI46773.1| 1378|Homo sapiens roundabout, axon guidance
receptor, homolog 2 (Drosophila) protein.
Length = 1378
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 85 RAGSVGTREHLCRKAPPYFYVQPQ*QFL--GPEVLYPLRPSAEESPCKLLARSRSQHLHM 258
R G + L +APP F V+P+ Q + G V +P P + SQ+L
Sbjct: 298 RVGKMEASATLTVRAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNL-- 355
Query: 259 LFP 267
LFP
Sbjct: 356 LFP 358
>AK055336-1|BAB70904.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ30774 fis, clone FEBRA2000772, weakly similar to
Mus musculus strain ICR 90 kDa actin-associated protein
palladin mRNA. ).
Length = 140
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 141 LRTTAIAVSWSRGPLSTASLSRGVAM*APSPFEITASSYAVPNLSTAPRKG 293
LR + +W R P S S A P+ + +S VP+L T R G
Sbjct: 17 LRAGCLVTAWPRAPSGAGSWSMAAASPWPASWGFPDASSTVPSLCTEARAG 67
>AB046788-1|BAB13394.1| 1380|Homo sapiens KIAA1568 protein protein.
Length = 1380
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 85 RAGSVGTREHLCRKAPPYFYVQPQ*QFL--GPEVLYPLRPSAEESPCKLLARSRSQHLHM 258
R G + L +APP F V+P+ Q + G V +P P + SQ+L
Sbjct: 300 RVGKMEASATLTVRAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNL-- 357
Query: 259 LFP 267
LFP
Sbjct: 358 LFP 360
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,938,101
Number of Sequences: 237096
Number of extensions: 3141913
Number of successful extensions: 7386
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 6749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7351
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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