Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11b14
         (825 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    27   0.53 
AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    26   1.2  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    26   1.6  
AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    24   6.5  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   6.5  
AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding pr...    23   8.6  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    23   8.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.6  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   8.6  

>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 27.5 bits (58), Expect = 0.53
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
 Frame = +3

Query: 507 IPHGRATRPLGLLDLSVPTVKQNVFIVV---NHLLLAFG-----HFAFVLHDRHYVEDIV 662
           IP+ R  RP+ L ++++P  +Q  F      +HLLL  G      F   L   ++ +D V
Sbjct: 556 IPYERTFRPMALSNINLPETEQFRFCNCGWPHHLLLPKGTAEGMKFDLFLMISNFADDTV 615

Query: 663 NVLFFQEI 686
           N  F ++I
Sbjct: 616 NQEFNEDI 623


>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 340 KFALVSTAVCLFLLAGIAALSLEDDDVDRSAIFLPI 447
           +F  + T + L +L      SLED DVDR  +  PI
Sbjct: 445 RFGKLQTCLGLAMLLKSYTFSLEDCDVDRPLLIDPI 480


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 729 LLQQIQHGPANCYCKFLGKKEH*LYPQRNACHAGR 625
           LL+Q+ HG  +  C  + +K     P R AC  G+
Sbjct: 170 LLRQLNHGGDHAECGQVERKSQPFGPARWACKLGK 204


>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 537 GLLDLSVPTVKQNVFIVVNHLLLAFGHFAFVLHDRHYVED 656
           G + +S P+  + VFI +N + L  G   F +H++  + D
Sbjct: 35  GNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTD 74


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 269 TFNNNVAPLLSSIYDEV 219
           +F + + PLLSSI DEV
Sbjct: 219 SFASTITPLLSSISDEV 235


>AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP10 protein.
          Length = 131

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 392 LRCRLKTTMSIGRPFFYPSFQC 457
           L C L  ++S+  P F P +QC
Sbjct: 41  LHCSLSLSLSLLSPSFSPIWQC 62


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 212 RDFITKNMAKFKTVALKLPVAPSTTEYVPTSISG 111
           RDF+ +N+ K   + LK  +A  TT+ + T   G
Sbjct: 160 RDFMEENVQKHGEMELKDVMARFTTDVIGTCAFG 193


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 143 TTEYVPTSISGSKKRKNSVPAKQRSSIKNRRN 48
           T  Y+P SI+  K R+ S   +QR +    R+
Sbjct: 452 TAAYLPASINPVKLRETSTIRRQRRTALGNRD 483


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 143 TTEYVPTSISGSKKRKNSVPAKQRSSIKNRRN 48
           T  Y+P SI+  K R+ S   +QR +    R+
Sbjct: 453 TAAYLPASINPVKLRETSTIRRQRRTALGNRD 484


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 874,263
Number of Sequences: 2352
Number of extensions: 18427
Number of successful extensions: 33
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)