Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11b14
(825 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024254-1|ABC86316.1| 199|Drosophila melanogaster IP15861p pro... 33 0.47
BT025830-1|ABF85730.1| 258|Drosophila melanogaster IP09124p pro... 33 0.63
AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-P... 33 0.63
AE013599-545|AAF59166.2| 922|Drosophila melanogaster CG14766-PA... 32 1.1
AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-P... 31 1.9
AE014296-3423|AAF51643.2| 1959|Drosophila melanogaster CG11451-P... 30 3.3
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b... 29 7.7
AE013599-2836|AAM70845.1| 947|Drosophila melanogaster CG7097-PB... 29 7.7
AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA... 29 7.7
>BT024254-1|ABC86316.1| 199|Drosophila melanogaster IP15861p
protein.
Length = 199
Score = 33.1 bits (72), Expect = 0.47
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = -2
Query: 800 EQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVM--QD 627
+QQ + +NE L N +++ + N+ M ++++ K N+N ++ P M +D
Sbjct: 135 QQQKQQQEQLQQQNETLSNNIKNFNNNEKIMQ-----LSYITKSNVNSVIK-FPAMSVKD 188
Query: 626 ERKMSKRKKK 597
++K++K+KKK
Sbjct: 189 KKKLNKKKKK 198
>BT025830-1|ABF85730.1| 258|Drosophila melanogaster IP09124p
protein.
Length = 258
Score = 32.7 bits (71), Expect = 0.63
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = -2
Query: 800 EQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVM--QD 627
+QQ + +NE L N +++ + N+ M ++++ K N+N ++ P M +D
Sbjct: 195 QQQKQQQEQLQQQNETLSNNIKNFNNNEKIMQ-----LSYITKSNVNSVIK-FPAMSVKD 248
Query: 626 ERKMSKRKKK 597
++K+ K+KKK
Sbjct: 249 KKKLKKKKKK 258
>AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-PA,
isoform A protein.
Length = 1853
Score = 32.7 bits (71), Expect = 0.63
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = -2
Query: 239 SSIYDEVLTRDFITKNMAKFKTVALKLPV-APSTTEYVPTSISGSKKRKNSVPAKQRSSI 63
+SI D T+D T + LK AP+TT+ +PT+ + K SS
Sbjct: 1553 TSISDSTTTKDITTTAASPTTAEDLKTTTPAPTTTDNIPTTTNAPTTTKEITTTTSASST 1612
Query: 62 KNRRNTTAAPTLLMVSDNT 6
TTA T ++ T
Sbjct: 1613 DETTTTTAPTTTKDITTTT 1631
>AE013599-545|AAF59166.2| 922|Drosophila melanogaster CG14766-PA
protein.
Length = 922
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -2
Query: 386 PASKKRQTAVLTNANLA--ELKESCEMRDKLYSEFYSLLNETFNNNVAPLLSSIYDEVLT 213
P S+KR+ +T N + E K LYS + +++ET N +PL Y L
Sbjct: 827 PVSEKRELISITKPNQSDCEAKHRSHKDVNLYSRYPKIISETLENLTSPLRFENYTRELL 886
Query: 212 RDFITKNMAK 183
+ + ++ K
Sbjct: 887 KAYKALDVTK 896
>AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-PA
protein.
Length = 1161
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 173 VALKLPVAPSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPT 30
+A K PVA STT VPT+++ SK S + ++ T +P+
Sbjct: 340 LAKKYPVATSTTTKVPTTLATSKTTSRSSSSSTTTTTMATSTTATSPS 387
>AE014296-3423|AAF51643.2| 1959|Drosophila melanogaster CG11451-PA
protein.
Length = 1959
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -2
Query: 152 APSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLM 21
AP T Y PT S + ++S+ + R S KN+ T A +L M
Sbjct: 227 APVATLYPPTQQSLMELEEDSIVREMRESTKNQTKTPAQKSLFM 270
>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
calmodulin-binding transcriptionactivator protein.
Length = 2009
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 809 NMPEQQSSTETAAVCKNEKLLNKLESSSYNKSN 711
N +Q ++T TAA C N K N L S+ +N
Sbjct: 1021 NQQQQITTTSTAATCDNLKSANALSEDSHTVNN 1053
>AE013599-2836|AAM70845.1| 947|Drosophila melanogaster CG7097-PB,
isoform B protein.
Length = 947
Score = 29.1 bits (62), Expect = 7.7
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = -2
Query: 824 KSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNV 645
+S+ P SS ++E N LE S S+MDQLI ++ + K L+
Sbjct: 465 RSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLENMGKSPRTRSLSD 524
Query: 644 MPVMQDERKMSKRKKKVINN 585
D+ + + ++NN
Sbjct: 525 GGTQDDDEAEKEAQPDLLNN 544
>AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA,
isoform A protein.
Length = 1218
Score = 29.1 bits (62), Expect = 7.7
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = -2
Query: 824 KSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNV 645
+S+ P SS ++E N LE S S+MDQLI ++ + K L+
Sbjct: 736 RSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLENMGKSPRTRSLSD 795
Query: 644 MPVMQDERKMSKRKKKVINN 585
D+ + + ++NN
Sbjct: 796 GGTQDDDEAEKEAQPDLLNN 815
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,870,162
Number of Sequences: 53049
Number of extensions: 785021
Number of successful extensions: 2507
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2495
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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