Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11b12
(532 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 40 0.007
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 40 0.007
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 40 0.007
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 40 0.007
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 40 0.007
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 40 0.007
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 40 0.007
AL834438-1|CAD39098.1| 1097|Homo sapiens hypothetical protein pr... 34 0.36
AL772337-4|CAI23630.2| 1445|Homo sapiens chromosome 9 open readi... 34 0.36
AK125845-1|BAC86315.1| 1445|Homo sapiens protein ( Homo sapiens ... 34 0.36
AK093185-1|BAC04087.1| 663|Homo sapiens protein ( Homo sapiens ... 34 0.36
AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens ... 33 0.63
BC069426-1|AAH69426.1| 108|Homo sapiens p53-regulated apoptosis... 31 1.9
BC069399-1|AAH69399.1| 108|Homo sapiens p53-regulated apoptosis... 31 1.9
AB045832-1|BAB16423.1| 108|Homo sapiens p53AIP1gamma protein. 31 1.9
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 31 2.5
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 31 2.5
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 31 2.5
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 31 2.5
AK124612-1|BAC85900.1| 722|Homo sapiens protein ( Homo sapiens ... 31 3.3
BC109114-1|AAI09115.1| 950|Homo sapiens ADAM metallopeptidase w... 30 5.8
AJ315733-1|CAC86014.1| 950|Homo sapiens metalloprotease disinte... 30 5.8
AY505119-1|AAS86434.1| 421|Homo sapiens kazrin isoform A protein. 29 7.7
AL391215-3|CAI13901.1| 758|Homo sapiens novel protein protein. 29 7.7
AL035405-5|CAI19832.1| 758|Homo sapiens novel protein protein. 29 7.7
AL034395-1|CAI19921.1| 758|Homo sapiens novel protein protein. 29 7.7
AB028949-1|BAA82978.1| 519|Homo sapiens KIAA1026 protein protein. 29 7.7
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 39.5 bits (88), Expect = 0.007
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -3
Query: 332 CTRCLAFGHGRKFCTESVDRCSHCG-GPHLREKCADFIAGTEPQCCNCSHSG--LRKADH 162
C RC GH K C D C +CG G H+ + C + E C NC G R DH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 113
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 335 QCTRCLAFGHGRKFCTESVDRCSHCGGP-HLREKCADFIAGTEPQCCNCSHSG 180
+C C FGH +K CT+ +C CG H+ C+ +E C C SG
Sbjct: 118 KCYSCGEFGHIQKDCTKV--KCYRCGETGHVAINCS---KTSEVNCYRCGESG 165
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 39.5 bits (88), Expect = 0.007
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -3
Query: 332 CTRCLAFGHGRKFCTESVDRCSHCG-GPHLREKCADFIAGTEPQCCNCSHSG--LRKADH 162
C RC GH K C D C +CG G H+ + C + E C NC G R DH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 113
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 335 QCTRCLAFGHGRKFCTESVDRCSHCGGP-HLREKCADFIAGTEPQCCNCSHSG 180
+C C FGH +K CT+ +C CG H+ C+ +E C C SG
Sbjct: 118 KCYSCGEFGHIQKDCTKV--KCYRCGETGHVAINCS---KTSEVNCYRCGESG 165
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 39.5 bits (88), Expect = 0.007
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -3
Query: 332 CTRCLAFGHGRKFCTESVDRCSHCG-GPHLREKCADFIAGTEPQCCNCSHSG--LRKADH 162
C RC GH K C D C +CG G H+ + C + E C NC G R DH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 113
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 335 QCTRCLAFGHGRKFCTESVDRCSHCGGP-HLREKCADFIAGTEPQCCNCSHSG 180
+C C FGH +K CT+ +C CG H+ C+ +E C C SG
Sbjct: 118 KCYSCGEFGHIQKDCTKV--KCYRCGETGHVAINCS---KTSEVNCYRCGESG 165
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 39.5 bits (88), Expect = 0.007
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -3
Query: 332 CTRCLAFGHGRKFCTESVDRCSHCG-GPHLREKCADFIAGTEPQCCNCSHSG--LRKADH 162
C RC GH K C D C +CG G H+ + C + E C NC G R DH
Sbjct: 47 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 106
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 335 QCTRCLAFGHGRKFCTESVDRCSHCGGP-HLREKCADFIAGTEPQCCNCSHSG 180
+C C FGH +K CT+ +C CG H+ C+ +E C C SG
Sbjct: 111 KCYSCGEFGHIQKDCTKV--KCYRCGETGHVAINCS---KTSEVNCYRCGESG 158
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 39.5 bits (88), Expect = 0.007
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -3
Query: 332 CTRCLAFGHGRKFCTESVDRCSHCG-GPHLREKCADFIAGTEPQCCNCSHSG--LRKADH 162
C RC GH K C D C +CG G H+ + C + E C NC G R DH
Sbjct: 47 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 106
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 335 QCTRCLAFGHGRKFCTESVDRCSHCGGP-HLREKCADFIAGTEPQCCNCSHSG 180
+C C FGH +K CT+ +C CG H+ C+ +E C C SG
Sbjct: 111 KCYSCGEFGHIQKDCTKV--KCYRCGETGHVAINCS---KTSEVNCYRCGESG 158
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 39.5 bits (88), Expect = 0.007
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -3
Query: 332 CTRCLAFGHGRKFCTESVDRCSHCG-GPHLREKCADFIAGTEPQCCNCSHSG--LRKADH 162
C RC GH K C D C +CG G H+ + C + E C NC G R DH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 113
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 335 QCTRCLAFGHGRKFCTESVDRCSHCGGP-HLREKCADFIAGTEPQCCNCSHSG 180
+C C FGH +K CT+ +C CG H+ C+ +E C C SG
Sbjct: 118 KCYSCGEFGHIQKDCTKV--KCYRCGETGHVAINCS---KTSEVNCYRCGESG 165
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 39.5 bits (88), Expect = 0.007
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -3
Query: 332 CTRCLAFGHGRKFCTESVDRCSHCG-GPHLREKCADFIAGTEPQCCNCSHSG--LRKADH 162
C RC GH K C D C +CG G H+ + C + E C NC G R DH
Sbjct: 44 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 103
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 335 QCTRCLAFGHGRKFCTESVDRCSHCGGP-HLREKCADFIAGTEPQCCNCSHSG 180
+C C FGH +K CT+ +C CG H+ C+ +E C C SG
Sbjct: 108 KCYSCGEFGHIQKDCTKV--KCYRCGETGHVAINCS---KTSEVNCYRCGESG 155
>AL834438-1|CAD39098.1| 1097|Homo sapiens hypothetical protein
protein.
Length = 1097
Score = 33.9 bits (74), Expect = 0.36
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -2
Query: 459 KSQNGARHCPGWSRGMAEDDGGWGPLPGPAKDQSRGPVS-AHPMHEVPRIWTWSKILHRE 283
K+ HCP +RG+ + D W P P R PVS A P H PR+ + S H +
Sbjct: 1032 KATPKGHHCPVKNRGIRDRDSSWAPPP-------REPVSPAGPHHHRPRMASTSGGPHPQ 1084
Query: 282 CGQMQSLWR 256
++ S R
Sbjct: 1085 LQELMSAQR 1093
>AL772337-4|CAI23630.2| 1445|Homo sapiens chromosome 9 open reading
frame 79 protein.
Length = 1445
Score = 33.9 bits (74), Expect = 0.36
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -2
Query: 459 KSQNGARHCPGWSRGMAEDDGGWGPLPGPAKDQSRGPVS-AHPMHEVPRIWTWSKILHRE 283
K+ HCP +RG+ + D W P P R PVS A P H PR+ + S H +
Sbjct: 1380 KATPKGHHCPVKNRGIRDRDSSWAPPP-------REPVSPAGPHHHRPRMASTSGGPHPQ 1432
Query: 282 CGQMQSLWR 256
++ S R
Sbjct: 1433 LQELMSAQR 1441
>AK125845-1|BAC86315.1| 1445|Homo sapiens protein ( Homo sapiens cDNA
FLJ43857 fis, clone TESTI4007239. ).
Length = 1445
Score = 33.9 bits (74), Expect = 0.36
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -2
Query: 459 KSQNGARHCPGWSRGMAEDDGGWGPLPGPAKDQSRGPVS-AHPMHEVPRIWTWSKILHRE 283
K+ HCP +RG+ + D W P P R PVS A P H PR+ + S H +
Sbjct: 1380 KATPKGHHCPVKNRGIRDRDSSWAPPP-------REPVSPAGPHHHRPRMASTSGGPHPQ 1432
Query: 282 CGQMQSLWR 256
++ S R
Sbjct: 1433 LQELMSAQR 1441
>AK093185-1|BAC04087.1| 663|Homo sapiens protein ( Homo sapiens
cDNA FLJ35866 fis, clone TESTI2007906. ).
Length = 663
Score = 33.9 bits (74), Expect = 0.36
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -2
Query: 459 KSQNGARHCPGWSRGMAEDDGGWGPLPGPAKDQSRGPVS-AHPMHEVPRIWTWSKILHRE 283
K+ HCP +RG+ + D W P P R PVS A P H PR+ + S H +
Sbjct: 598 KATPKGHHCPVKNRGIRDRDSSWAPPP-------REPVSPAGPHHHRPRMASTSGGPHPQ 650
Query: 282 CGQMQSLWR 256
++ S R
Sbjct: 651 LQELMSAQR 659
>AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ40133 fis, clone TESTI2012231. ).
Length = 225
Score = 33.1 bits (72), Expect = 0.63
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 103 TQHMHNLNAGHYTARTHRHKAHRNKNTTHT 14
T H H+ + HY+ HRH +H THT
Sbjct: 149 TPHTHHKHTSHYSYTYHRHLSHTTHTHTHT 178
>BC069426-1|AAH69426.1| 108|Homo sapiens p53-regulated
apoptosis-inducing protein 1 protein.
Length = 108
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -2
Query: 438 HCPGWSRGMAEDDGGWGPLPGPAKDQS-RG-PVSAHPMHEVPRIWTWSKILHRECGQMQS 265
H PGW +E+ G P P + S RG + + H+ P + S LH +C Q ++
Sbjct: 43 HTPGWVSPCSENRDGLLPATAPGRLCSHRGADIPSFQTHQDPVTASGSSELHADCPQFRA 102
Query: 264 LWRTAS 247
L R +
Sbjct: 103 LDRAGN 108
>BC069399-1|AAH69399.1| 108|Homo sapiens p53-regulated
apoptosis-inducing protein 1 protein.
Length = 108
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -2
Query: 438 HCPGWSRGMAEDDGGWGPLPGPAKDQS-RG-PVSAHPMHEVPRIWTWSKILHRECGQMQS 265
H PGW +E+ G P P + S RG + + H+ P + S LH +C Q ++
Sbjct: 43 HTPGWVSPCSENRDGLLPATAPGRLCSHRGADIPSFQTHQDPVTASGSSELHADCPQFRA 102
Query: 264 LWRTAS 247
L R +
Sbjct: 103 LDRAGN 108
>AB045832-1|BAB16423.1| 108|Homo sapiens p53AIP1gamma protein.
Length = 108
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -2
Query: 438 HCPGWSRGMAEDDGGWGPLPGPAKDQS-RG-PVSAHPMHEVPRIWTWSKILHRECGQMQS 265
H PGW +E+ G P P + S RG + + H+ P + S LH +C Q ++
Sbjct: 43 HTPGWVSPCSENRDGLLPATAPGRLCSHRGADIPSFQTHQDPVTASGSSELHADCPQFRA 102
Query: 264 LWRTAS 247
L R +
Sbjct: 103 LDRAGN 108
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 335 QCTRCLAFGHGRKFCTESVDRCSHCGGP-HLREKCADFIAGTEPQCCNCSHSG 180
+C C FGH +K CT+ +C CG H+ C+ +E C C SG
Sbjct: 113 KCYSCGEFGHIQKDCTKV--KCYRCGETGHVAINCS---KTSEVNCYRCGESG 160
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 335 QCTRCLAFGHGRKFCTESVDRCSHCGGP-HLREKCADFIAGTEPQCCNCSHSG 180
+C C FGH +K CT+ +C CG H+ C+ +E C C SG
Sbjct: 112 KCYSCGEFGHIQKDCTKV--KCYRCGETGHVAINCS---KTSEVNCYRCGESG 159
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 335 QCTRCLAFGHGRKFCTESVDRCSHCGGP-HLREKCADFIAGTEPQCCNCSHSG 180
+C C FGH +K CT+ +C CG H+ C+ +E C C SG
Sbjct: 119 KCYSCGEFGHIQKDCTKV--KCYRCGETGHVAINCS---KTSEVNCYRCGESG 166
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 335 QCTRCLAFGHGRKFCTESVDRCSHCGGP-HLREKCADFIAGTEPQCCNCSHSG 180
+C C FGH +K CT+ +C CG H+ C+ +E C C SG
Sbjct: 119 KCYSCGEFGHIQKDCTKV--KCYRCGETGHVAINCS---KTSEVNCYRCGESG 166
>AK124612-1|BAC85900.1| 722|Homo sapiens protein ( Homo sapiens
cDNA FLJ42621 fis, clone BRACE3015262. ).
Length = 722
Score = 30.7 bits (66), Expect = 3.3
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = -2
Query: 381 PGPAKDQSRGPVSAHPMHEVPRIWTWSKILHRECGQMQSLWRTASAREMRRLHRRDRTAV 202
PGP S GP H +W + G +++ AR++RRL RR R A+
Sbjct: 499 PGPPSPPSEGPRLGH-------LWQQRSTITHLLGNWKAIMAHVPARQLRRLSRRPRGAL 551
Query: 201 LQLLTLWVAEGRP 163
L +G P
Sbjct: 552 SPEQFLPHVDGAP 564
>BC109114-1|AAI09115.1| 950|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 15 protein.
Length = 950
Score = 29.9 bits (64), Expect = 5.8
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 226 KSAHFSRRCGPPQ*LHLSTLSVQNFRPCPNARHLVHWMSGDWSSTLILCRS 378
KS+H GP LH S LS+ N P+ R W++G W C S
Sbjct: 808 KSSHPKDPRGPSV-LHNSVLSLSNQVEQPDDRPPARWVAGSWGPCSASCGS 857
>AJ315733-1|CAC86014.1| 950|Homo sapiens metalloprotease
disintegrin 15 with thrombospondin domains protein.
Length = 950
Score = 29.9 bits (64), Expect = 5.8
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 226 KSAHFSRRCGPPQ*LHLSTLSVQNFRPCPNARHLVHWMSGDWSSTLILCRS 378
KS+H GP LH S LS+ N P+ R W++G W C S
Sbjct: 808 KSSHPKDPRGPSV-LHNSVLSLSNQVEQPDDRPPARWVAGSWGPCSASCGS 857
>AY505119-1|AAS86434.1| 421|Homo sapiens kazrin isoform A protein.
Length = 421
Score = 29.5 bits (63), Expect = 7.7
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = -2
Query: 492 RNDHKVQEEDKKSQNGARHCPGWSRGMAEDDGGWGPLPGP--AKDQSRGPVSAHPMHEVP 319
R D VQ ++ N +R +AE GG GP PGP A S SA E P
Sbjct: 11 RIDGAVQSASQEVTNLRAELTATNRRLAELSGGGGPGPGPGAAASASAAGDSAATNMENP 70
Query: 318 RIWTWSKILHRECGQMQSLWRTASAREMRRLHRRD 214
++ +L E ++Q R+M+ + +D
Sbjct: 71 QLGA-QVLLREEVSRLQE--EVHLLRQMKEMLAKD 102
>AL391215-3|CAI13901.1| 758|Homo sapiens novel protein protein.
Length = 758
Score = 29.5 bits (63), Expect = 7.7
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = -2
Query: 492 RNDHKVQEEDKKSQNGARHCPGWSRGMAEDDGGWGPLPGP--AKDQSRGPVSAHPMHEVP 319
R D VQ ++ N +R +AE GG GP PGP A S SA E P
Sbjct: 11 RIDGAVQSASQEVTNLRAELTATNRRLAELSGGGGPGPGPGAAASASAAGDSAATNMENP 70
Query: 318 RIWTWSKILHRECGQMQSLWRTASAREMRRLHRRD 214
++ +L E ++Q R+M+ + +D
Sbjct: 71 QLGA-QVLLREEVSRLQE--EVHLLRQMKEMLAKD 102
>AL035405-5|CAI19832.1| 758|Homo sapiens novel protein protein.
Length = 758
Score = 29.5 bits (63), Expect = 7.7
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = -2
Query: 492 RNDHKVQEEDKKSQNGARHCPGWSRGMAEDDGGWGPLPGP--AKDQSRGPVSAHPMHEVP 319
R D VQ ++ N +R +AE GG GP PGP A S SA E P
Sbjct: 11 RIDGAVQSASQEVTNLRAELTATNRRLAELSGGGGPGPGPGAAASASAAGDSAATNMENP 70
Query: 318 RIWTWSKILHRECGQMQSLWRTASAREMRRLHRRD 214
++ +L E ++Q R+M+ + +D
Sbjct: 71 QLGA-QVLLREEVSRLQE--EVHLLRQMKEMLAKD 102
>AL034395-1|CAI19921.1| 758|Homo sapiens novel protein protein.
Length = 758
Score = 29.5 bits (63), Expect = 7.7
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = -2
Query: 492 RNDHKVQEEDKKSQNGARHCPGWSRGMAEDDGGWGPLPGP--AKDQSRGPVSAHPMHEVP 319
R D VQ ++ N +R +AE GG GP PGP A S SA E P
Sbjct: 11 RIDGAVQSASQEVTNLRAELTATNRRLAELSGGGGPGPGPGAAASASAAGDSAATNMENP 70
Query: 318 RIWTWSKILHRECGQMQSLWRTASAREMRRLHRRD 214
++ +L E ++Q R+M+ + +D
Sbjct: 71 QLGA-QVLLREEVSRLQE--EVHLLRQMKEMLAKD 102
>AB028949-1|BAA82978.1| 519|Homo sapiens KIAA1026 protein protein.
Length = 519
Score = 29.5 bits (63), Expect = 7.7
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = -2
Query: 492 RNDHKVQEEDKKSQNGARHCPGWSRGMAEDDGGWGPLPGP--AKDQSRGPVSAHPMHEVP 319
R D VQ ++ N +R +AE GG GP PGP A S SA E P
Sbjct: 109 RIDGAVQSASQEVTNLRAELTATNRRLAELSGGGGPGPGPGAAASASAAGDSAATNMENP 168
Query: 318 RIWTWSKILHRECGQMQSLWRTASAREMRRLHRRD 214
++ +L E ++Q R+M+ + +D
Sbjct: 169 QLGA-QVLLREEVSRLQE--EVHLLRQMKEMLAKD 200
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,204,342
Number of Sequences: 237096
Number of extensions: 1946703
Number of successful extensions: 6083
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6078
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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