Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11a17
(880 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11451-1|AAA28918.1| 786|Drosophila melanogaster serine protein... 31 1.6
AY119618-1|AAM50272.1| 683|Drosophila melanogaster LD44584p pro... 31 1.6
AE014297-2154|AAF55277.1| 787|Drosophila melanogaster CG4316-PA... 31 1.6
BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p pro... 29 6.4
BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p pro... 29 6.4
AY069239-1|AAL39384.1| 688|Drosophila melanogaster GM01240p pro... 29 6.4
AE014296-140|AAN11452.1| 688|Drosophila melanogaster CG13900-PB... 29 6.4
AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA... 29 6.4
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 29 6.4
>L11451-1|AAA28918.1| 786|Drosophila melanogaster serine proteinase
protein.
Length = 786
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -3
Query: 755 RTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTT 624
RT +P TT+R T T+ PT PT ATSSS + K T
Sbjct: 424 RTTTPTTTTRR--TTTNKPTRPYQRPTTATSSSSTSTTSSKTPT 465
>AY119618-1|AAM50272.1| 683|Drosophila melanogaster LD44584p
protein.
Length = 683
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -3
Query: 755 RTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTT 624
RT +P TT+R T T+ PT PT ATSSS + K T
Sbjct: 321 RTTTPTTTTRR--TTTNKPTRPYQRPTTATSSSSTSTTSSKTPT 362
>AE014297-2154|AAF55277.1| 787|Drosophila melanogaster CG4316-PA
protein.
Length = 787
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -3
Query: 755 RTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTT 624
RT +P TT+R T T+ PT PT ATSSS + K T
Sbjct: 425 RTTTPTTTTRR--TTTNKPTRPYQRPTTATSSSSTSTTSSKTPT 466
>BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p protein.
Length = 1227
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 128 LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 250
++ +++ +F RY+ AEN L IFA HP+ LL Y
Sbjct: 1010 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 1051
>BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p protein.
Length = 1227
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 128 LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 250
++ +++ +F RY+ AEN L IFA HP+ LL Y
Sbjct: 1010 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 1051
>AY069239-1|AAL39384.1| 688|Drosophila melanogaster GM01240p
protein.
Length = 688
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 128 LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 250
++ +++ +F RY+ AEN L IFA HP+ LL Y
Sbjct: 471 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 512
>AE014296-140|AAN11452.1| 688|Drosophila melanogaster CG13900-PB,
isoform B protein.
Length = 688
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 128 LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 250
++ +++ +F RY+ AEN L IFA HP+ LL Y
Sbjct: 471 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 512
>AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA,
isoform A protein.
Length = 1227
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 128 LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 250
++ +++ +F RY+ AEN L IFA HP+ LL Y
Sbjct: 1010 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 1051
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 29.5 bits (63), Expect = 6.4
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = -3
Query: 752 TASPL*TTKR*WT--CTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA 579
T+ P TT R T CT SPT+ T TS+S T + TT T + P
Sbjct: 536 TSRPTTTTPRSTTTTCTCSPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRST 595
Query: 578 *TTNT 564
TT+T
Sbjct: 596 TTTST 600
Score = 29.1 bits (62), Expect = 8.5
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 752 TASPL*TTKR*WT--CTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA 579
T+ P TT R T CTS PT+ T T++S T + TT P + + PT
Sbjct: 1112 TSRPTTTTPRSTTTPCTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPCPTTTPSASPTRT 1171
Query: 578 *TT 570
TT
Sbjct: 1172 TTT 1174
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,763,482
Number of Sequences: 53049
Number of extensions: 817089
Number of successful extensions: 2063
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2063
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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