Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11a14
         (578 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   3.1  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       23   7.2  
AY752907-1|AAV30081.1|   97|Anopheles gambiae peroxidase 13A pro...    23   9.5  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    23   9.5  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.5  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 37  LKEPSTPNISSAVFGF 84
           L+EPS+P +S   FGF
Sbjct: 575 LEEPSSPRLSDRQFGF 590


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 224 DILPVEYGGNGGSIEEIIDYWRKKVKEYSDWLEEDDQYGTD 102
           D L +E G N  + ++I+D+   K+K     L  +D+  TD
Sbjct: 113 DNLVLEQGSNNSNSKDIVDFEVLKIKSA---LPVEDELRTD 150


>AY752907-1|AAV30081.1|   97|Anopheles gambiae peroxidase 13A
           protein.
          Length = 97

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 441 SFLTNDTNAHQENGGCFSG 385
           S +TN+ +   ENGG +SG
Sbjct: 21  SQITNNPDLRLENGGYYSG 39


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -1

Query: 164 WRKKVKEY 141
           WRKK+KEY
Sbjct: 350 WRKKIKEY 357


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 209  EYGGNGGSIEEIIDYWRKKV 150
            E GG GG +EE I  +++ +
Sbjct: 1564 ESGGGGGVVEETISSFKENI 1583


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,439
Number of Sequences: 2352
Number of extensions: 12927
Number of successful extensions: 46
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)