Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11a14
(578 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer... 98 2e-20
D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer... 98 2e-20
BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha) tran... 98 2e-20
Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open readin... 87 3e-17
BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open read... 87 3e-17
AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open read... 87 3e-17
BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding p... 81 2e-15
BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding p... 81 2e-15
AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetic... 81 2e-15
BC042617-1|AAH42617.1| 354|Homo sapiens retinaldehyde binding p... 76 1e-13
AY094971-1|AAM15733.1| 354|Homo sapiens cellular retinaldehyde-... 76 1e-13
AL591428-3|CAI12307.1| 181|Homo sapiens protein ( to hypothetic... 75 2e-13
L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding pro... 69 1e-11
J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein. 69 1e-11
BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding p... 69 1e-11
Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open readin... 62 7e-10
AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open read... 62 7e-10
CR456346-1|CAG30232.1| 352|Homo sapiens Em:AC004832.5 protein. 49 1e-05
BC139912-1|AAI39913.1| 360|Homo sapiens SEC14L4 protein protein. 49 1e-05
AY158085-1|AAO21869.1| 406|Homo sapiens SEC14p-like protein TAP... 49 1e-05
AC004832-4|AAF19259.1| 406|Homo sapiens WUGSC:H_DJ0539M06.4 pro... 49 1e-05
CR456571-1|CAG30457.1| 403|Homo sapiens SEC14L2 protein. 46 1e-04
BC058915-1|AAH58915.1| 392|Homo sapiens SEC14L2 protein protein. 46 1e-04
AL096881-1|CAB51405.1| 403|Homo sapiens hypothetical protein pr... 46 1e-04
AK223587-1|BAD97307.1| 403|Homo sapiens SEC14-like 2 variant pr... 46 1e-04
AC004832-1|AAF19256.1| 403|Homo sapiens WUGSC:H_DJ0539M06.1 pro... 46 1e-04
AB033012-1|BAA86500.2| 405|Homo sapiens KIAA1186 protein protein. 46 1e-04
BC043277-1|AAH43277.1| 839|Homo sapiens SYNJ2 protein protein. 30 5.1
AY152396-1|AAN73051.1| 1288|Homo sapiens synaptojanin 2A protein. 30 5.1
AL591375-2|CAI12099.1| 1652|Homo sapiens NHS-like 1 protein. 30 5.1
AL391669-2|CAI14157.1| 1652|Homo sapiens NHS-like 1 protein. 30 5.1
AL139330-4|CAI12983.1| 1496|Homo sapiens synaptojanin 2 protein. 30 5.1
AL139330-1|CAI12978.1| 581|Homo sapiens synaptojanin 2 protein. 30 5.1
AF318616-1|AAG46036.1| 1496|Homo sapiens synaptojanin 2 protein. 30 5.1
AF039945-1|AAD02178.1| 1443|Homo sapiens synaptojanin 2B protein. 30 5.1
AB037778-1|BAA92595.1| 836|Homo sapiens KIAA1357 protein protein. 30 5.1
AB002346-1|BAA20805.2| 1443|Homo sapiens KIAA0348 protein protein. 30 5.1
U21551-1|AAB08528.1| 384|Homo sapiens ECA39 protein. 30 6.8
BC033864-1|AAH33864.1| 320|Homo sapiens BCAT1 protein protein. 30 6.8
AK056255-1|BAB71129.1| 386|Homo sapiens protein ( Homo sapiens ... 30 6.8
X87949-1|CAA61201.1| 653|Homo sapiens BiP protein. 29 9.0
M19645-1|AAA52614.1| 653|Homo sapiens protein ( Human 78 kdalto... 29 9.0
DQ385847-1|ABD04090.1| 654|Homo sapiens heat shock 70kDa protei... 29 9.0
BC112963-1|AAI12964.1| 655|Homo sapiens HSPA5 protein protein. 29 9.0
BC020235-1|AAH20235.1| 654|Homo sapiens heat shock 70kDa protei... 29 9.0
AJ271729-1|CAB71335.1| 654|Homo sapiens glucose-regulated prote... 29 9.0
AF216292-1|AAF42836.1| 654|Homo sapiens endoplasmic reticulum l... 29 9.0
AF188611-1|AAF13605.1| 639|Homo sapiens BiP protein protein. 29 9.0
>U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 98.3 bits (234), Expect = 2e-20
Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
Frame = -1
Query: 575 DADKYNISDVLAVYFVLEKIVMMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMVV 396
D + DV V + ++++ E + GI + DL+ + SH Q+TP + KK+
Sbjct: 123 DPKVFTAYDVFRVSLITSELIVQEVETQR-NGIKAIFDLEGWQFSHAFQITPSVAKKIAA 181
Query: 395 ASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEE-MYKYIPKDI 219
D+ P + +G H +N P F +F+ IK + EK K+R+++H NY++ + ++ P DI
Sbjct: 182 VLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DI 240
Query: 218 LPVEYGGNGGSIEEIIDYWRKKVKEYSDWL 129
LP+EYGG S+E+I W + + D+L
Sbjct: 241 LPLEYGGEEFSMEDICQEWTNFIMKSEDYL 270
>D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 98.3 bits (234), Expect = 2e-20
Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
Frame = -1
Query: 575 DADKYNISDVLAVYFVLEKIVMMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMVV 396
D + DV V + ++++ E + GI + DL+ + SH Q+TP + KK+
Sbjct: 123 DPKVFTAYDVFRVSLITSELIVQEVETQR-NGIKAIFDLEGWQFSHAFQITPSVAKKIAA 181
Query: 395 ASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEE-MYKYIPKDI 219
D+ P + +G H +N P F +F+ IK + EK K+R+++H NY++ + ++ P DI
Sbjct: 182 VLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DI 240
Query: 218 LPVEYGGNGGSIEEIIDYWRKKVKEYSDWL 129
LP+EYGG S+E+I W + + D+L
Sbjct: 241 LPLEYGGEEFSMEDICQEWTNFIMKSEDYL 270
>BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha)
transfer protein protein.
Length = 278
Score = 98.3 bits (234), Expect = 2e-20
Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
Frame = -1
Query: 575 DADKYNISDVLAVYFVLEKIVMMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMVV 396
D + DV V + ++++ E + GI + DL+ + SH Q+TP + KK+
Sbjct: 123 DPKVFTAYDVFRVSLITSELIVQEVETQR-NGIKAIFDLEGWQFSHAFQITPSVAKKIAA 181
Query: 395 ASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEE-MYKYIPKDI 219
D+ P + +G H +N P F +F+ IK + EK K+R+++H NY++ + ++ P DI
Sbjct: 182 VLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DI 240
Query: 218 LPVEYGGNGGSIEEIIDYWRKKVKEYSDWL 129
LP+EYGG S+E+I W + + D+L
Sbjct: 241 LPLEYGGEEFSMEDICQEWTNFIMKSEDYL 270
>Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 87.4 bits (207), Expect = 3e-17
Identities = 41/124 (33%), Positives = 65/124 (52%)
Frame = -1
Query: 551 DVLAVYFVLEKIVMMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMVVASQDAMPF 372
++ A+Y LEK++ E+ V GI +AD + +S P + KK++ QD P
Sbjct: 161 NIRAIYLTLEKLIQSEETQ--VNGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPI 218
Query: 371 RQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNG 192
R K H +N P F+ IF IK + EK R ++H + ++ +P+ ILP EYGG
Sbjct: 219 RIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGGTA 278
Query: 191 GSIE 180
G ++
Sbjct: 279 GELD 282
>BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 87.4 bits (207), Expect = 3e-17
Identities = 41/124 (33%), Positives = 65/124 (52%)
Frame = -1
Query: 551 DVLAVYFVLEKIVMMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMVVASQDAMPF 372
++ A+Y LEK++ E+ V GI +AD + +S P + KK++ QD P
Sbjct: 161 NIRAIYLTLEKLIQSEETQ--VNGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPI 218
Query: 371 RQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNG 192
R K H +N P F+ IF IK + EK R ++H + ++ +P+ ILP EYGG
Sbjct: 219 RIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGGTA 278
Query: 191 GSIE 180
G ++
Sbjct: 279 GELD 282
>AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 87.4 bits (207), Expect = 3e-17
Identities = 41/124 (33%), Positives = 65/124 (52%)
Frame = -1
Query: 551 DVLAVYFVLEKIVMMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMVVASQDAMPF 372
++ A+Y LEK++ E+ V GI +AD + +S P + KK++ QD P
Sbjct: 161 NIRAIYLTLEKLIQSEETQ--VNGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPI 218
Query: 371 RQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNG 192
R K H +N P F+ IF IK + EK R ++H + ++ +P+ ILP EYGG
Sbjct: 219 RIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGGTA 278
Query: 191 GSIE 180
G ++
Sbjct: 279 GELD 282
>BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 81.4 bits (192), Expect = 2e-15
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Frame = -1
Query: 575 DADKYNISDVL-AVYFVLEKIVMMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMV 399
D +Y + D+L A+ LE M+ED V G + D ++TP +++ +
Sbjct: 127 DQSRYTLVDILRAILLSLE--AMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAI 184
Query: 398 VASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDI 219
QD+ P R G H++N P ++ I+ + EK +KR+++H N +++ I +I
Sbjct: 185 EGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLIHPEI 244
Query: 218 LPVEYGGNGGSIEEIIDYWRKKVKEYSDWLEEDDQYGTDESKRPGK 81
LP E+GG + + W + + ++ ++D +Y D P K
Sbjct: 245 LPSEFGGMLPPYD--MGTWARTLLDHE--YDDDSEYNVDSYSMPVK 286
>BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 81.4 bits (192), Expect = 2e-15
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Frame = -1
Query: 575 DADKYNISDVL-AVYFVLEKIVMMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMV 399
D +Y + D+L A+ LE M+ED V G + D ++TP +++ +
Sbjct: 127 DQSRYTLVDILRAILLSLE--AMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAI 184
Query: 398 VASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDI 219
QD+ P R G H++N P ++ I+ + EK +KR+++H N +++ I +I
Sbjct: 185 EGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLIHPEI 244
Query: 218 LPVEYGGNGGSIEEIIDYWRKKVKEYSDWLEEDDQYGTDESKRPGK 81
LP E+GG + + W + + ++ ++D +Y D P K
Sbjct: 245 LPSEFGGMLPPYD--MGTWARTLLDHE--YDDDSEYNVDSYSMPVK 286
>AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 327
Score = 81.4 bits (192), Expect = 2e-15
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Frame = -1
Query: 575 DADKYNISDVL-AVYFVLEKIVMMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMV 399
D +Y + D+L A+ LE M+ED V G + D ++TP +++ +
Sbjct: 127 DQSRYTLVDILRAILLSLE--AMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAI 184
Query: 398 VASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDI 219
QD+ P R G H++N P ++ I+ + EK +KR+++H N +++ I +I
Sbjct: 185 EGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLIHPEI 244
Query: 218 LPVEYGGNGGSIEEIIDYWRKKVKEYSDWLEEDDQYGTDESKRPGK 81
LP E+GG + + W + + ++ ++D +Y D P K
Sbjct: 245 LPSEFGGMLPPYD--MGTWARTLLDHE--YDDDSEYNVDSYSMPVK 286
>BC042617-1|AAH42617.1| 354|Homo sapiens retinaldehyde binding
protein 1-like 1 protein.
Length = 354
Score = 75.8 bits (178), Expect = 1e-13
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Frame = -1
Query: 575 DADKYNISDVL-AVYFVLEKIVMMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMV 399
D + + +D+L A+ LE V++ED + G + D ++TP ++K +
Sbjct: 149 DQSRNSFTDILRAILLSLE--VLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKLAI 206
Query: 398 VASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDI 219
QD+ P R G H++N P ++ IK + +K +KR+++H N +++ I +
Sbjct: 207 EGLQDSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEF 266
Query: 218 LPVEYGG 198
LP E+GG
Sbjct: 267 LPSEFGG 273
>AY094971-1|AAM15733.1| 354|Homo sapiens cellular
retinaldehyde-binding protein-like protein protein.
Length = 354
Score = 75.8 bits (178), Expect = 1e-13
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Frame = -1
Query: 575 DADKYNISDVL-AVYFVLEKIVMMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMV 399
D + + +D+L A+ LE V++ED + G + D ++TP ++K +
Sbjct: 149 DQSRNSFTDILRAILLSLE--VLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKLAI 206
Query: 398 VASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDI 219
QD+ P R G H++N P ++ IK + +K +KR+++H N +++ I +
Sbjct: 207 EGLQDSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEF 266
Query: 218 LPVEYGG 198
LP E+GG
Sbjct: 267 LPSEFGG 273
>AL591428-3|CAI12307.1| 181|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 181
Score = 74.9 bits (176), Expect = 2e-13
Identities = 36/144 (25%), Positives = 69/144 (47%)
Frame = -1
Query: 512 MMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMVVASQDAMPFRQKGTHYLNTPTG 333
M+ED V G + D ++TP +++ + QD+ P R G H++N P
Sbjct: 1 MIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWY 60
Query: 332 FETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNGGSIEEIIDYWRKK 153
++ I+ + EK +KR+++H N +++ I +ILP E+GG + + W +
Sbjct: 61 IHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLIHPEILPSEFGGMLPPYD--MGTWART 118
Query: 152 VKEYSDWLEEDDQYGTDESKRPGK 81
+ ++ ++D +Y D P K
Sbjct: 119 LLDHE--YDDDSEYNVDSYSMPVK 140
>L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding
protein protein.
Length = 317
Score = 68.9 bits (161), Expect = 1e-11
Identities = 33/126 (26%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = -1
Query: 572 ADKYNISDVLAVY-FVLEKIVMMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMVV 396
+ + ++L Y F+LEK+ +E++ + G + + + + ++KMV
Sbjct: 168 SQEITFDEILQAYCFILEKL--LENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVD 225
Query: 395 ASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDIL 216
QD+ P R K H+++ P F T +N +K + K +R++VH + Y+ I ++IL
Sbjct: 226 MLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENIL 285
Query: 215 PVEYGG 198
P ++GG
Sbjct: 286 PSDFGG 291
>J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein.
Length = 317
Score = 68.9 bits (161), Expect = 1e-11
Identities = 33/126 (26%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = -1
Query: 572 ADKYNISDVLAVY-FVLEKIVMMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMVV 396
+ + ++L Y F+LEK+ +E++ + G + + + + ++KMV
Sbjct: 168 SQEITFDEILQAYCFILEKL--LENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVD 225
Query: 395 ASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDIL 216
QD+ P R K H+++ P F T +N +K + K +R++VH + Y+ I ++IL
Sbjct: 226 MLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENIL 285
Query: 215 PVEYGG 198
P ++GG
Sbjct: 286 PSDFGG 291
>BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding
protein 1 protein.
Length = 317
Score = 68.9 bits (161), Expect = 1e-11
Identities = 33/126 (26%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = -1
Query: 572 ADKYNISDVLAVY-FVLEKIVMMEDDNAIVAGIFFVADLDALKISHFLQMTPMLIKKMVV 396
+ + ++L Y F+LEK+ +E++ + G + + + + ++KMV
Sbjct: 168 SQEITFDEILQAYCFILEKL--LENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVD 225
Query: 395 ASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDIL 216
QD+ P R K H+++ P F T +N +K + K +R++VH + Y+ I ++IL
Sbjct: 226 MLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENIL 285
Query: 215 PVEYGG 198
P ++GG
Sbjct: 286 PSDFGG 291
>Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 62.5 bits (145), Expect(2) = 7e-10
Identities = 26/71 (36%), Positives = 39/71 (54%)
Frame = -1
Query: 392 SQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILP 213
+QD P R K H +N P F+ IF IK + EK R ++H + ++ +P+ ILP
Sbjct: 178 TQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSILP 237
Query: 212 VEYGGNGGSIE 180
EYGG G ++
Sbjct: 238 KEYGGTAGELD 248
Score = 20.6 bits (41), Expect(2) = 7e-10
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = -1
Query: 551 DVLAVYFVLEKIVMMED 501
++ A+Y LEK++ E+
Sbjct: 161 NIRAIYLTLEKLIQSEE 177
>AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 62.5 bits (145), Expect(2) = 7e-10
Identities = 26/71 (36%), Positives = 39/71 (54%)
Frame = -1
Query: 392 SQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILP 213
+QD P R K H +N P F+ IF IK + EK R ++H + ++ +P+ ILP
Sbjct: 178 TQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSILP 237
Query: 212 VEYGGNGGSIE 180
EYGG G ++
Sbjct: 238 KEYGGTAGELD 248
Score = 20.6 bits (41), Expect(2) = 7e-10
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = -1
Query: 551 DVLAVYFVLEKIVMMED 501
++ A+Y LEK++ E+
Sbjct: 161 NIRAIYLTLEKLIQSEE 177
>CR456346-1|CAG30232.1| 352|Homo sapiens Em:AC004832.5 protein.
Length = 352
Score = 49.2 bits (112), Expect = 1e-05
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -1
Query: 470 VADLDALKISHFLQMTPMLIKKMVVASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNE 291
V D++ L + H + + ++ + P K + P F FN +K+ M+E
Sbjct: 98 VFDMEGLSLKHLWKPAVEVYQQFFSILEANYPETLKNLIVIRAPKLFPVAFNLVKSFMSE 157
Query: 290 KNKKRLYVHNQNY-EEMYKYIPKDILPVEYGG 198
+ ++++ + N+ +E+ K+I D LPVE+GG
Sbjct: 158 ETRRKIVILGDNWKQELTKFISPDQLPVEFGG 189
>BC139912-1|AAI39913.1| 360|Homo sapiens SEC14L4 protein protein.
Length = 360
Score = 49.2 bits (112), Expect = 1e-05
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -1
Query: 470 VADLDALKISHFLQMTPMLIKKMVVASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNE 291
V D++ L + H + + ++ + P K + P F FN +K+ M+E
Sbjct: 152 VFDMEGLSLKHLWKPAVEVYQQFFSILEANYPETLKNLIVIRAPKLFPVAFNLVKSFMSE 211
Query: 290 KNKKRLYVHNQNY-EEMYKYIPKDILPVEYGG 198
+ ++++ + N+ +E+ K+I D LPVE+GG
Sbjct: 212 ETRRKIVILGDNWKQELTKFISPDQLPVEFGG 243
>AY158085-1|AAO21869.1| 406|Homo sapiens SEC14p-like protein TAP3
protein.
Length = 406
Score = 49.2 bits (112), Expect = 1e-05
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -1
Query: 470 VADLDALKISHFLQMTPMLIKKMVVASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNE 291
V D++ L + H + + ++ + P K + P F FN +K+ M+E
Sbjct: 152 VFDMEGLSLKHLWKPAVEVYQQFFSILEANYPETLKNLIVIRAPKLFPVAFNLVKSFMSE 211
Query: 290 KNKKRLYVHNQNY-EEMYKYIPKDILPVEYGG 198
+ ++++ + N+ +E+ K+I D LPVE+GG
Sbjct: 212 ETRRKIVILGDNWKQELTKFISPDQLPVEFGG 243
>AC004832-4|AAF19259.1| 406|Homo sapiens WUGSC:H_DJ0539M06.4
protein.
Length = 406
Score = 49.2 bits (112), Expect = 1e-05
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -1
Query: 470 VADLDALKISHFLQMTPMLIKKMVVASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNE 291
V D++ L + H + + ++ + P K + P F FN +K+ M+E
Sbjct: 152 VFDMEGLSLKHLWKPAVEVYQQFFSILEANYPETLKNLIVIRAPKLFPVAFNLVKSFMSE 211
Query: 290 KNKKRLYVHNQNY-EEMYKYIPKDILPVEYGG 198
+ ++++ + N+ +E+ K+I D LPVE+GG
Sbjct: 212 ETRRKIVILGDNWKQELTKFISPDQLPVEFGG 243
>CR456571-1|CAG30457.1| 403|Homo sapiens SEC14L2 protein.
Length = 403
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = -1
Query: 488 VAGIFFVADLDALKISHFLQMTPMLIKKMVVASQDAMPFRQKGTHYLNTPTGFETIFNTI 309
V I + D + L + H + + + ++ P K + P F +N I
Sbjct: 146 VETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLI 205
Query: 308 KALMNEKNKKRLYVHNQNYEE-MYKYIPKDILPVEYGG 198
K ++E +K++ V N++E + K+I D +PVEYGG
Sbjct: 206 KPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGG 243
>BC058915-1|AAH58915.1| 392|Homo sapiens SEC14L2 protein protein.
Length = 392
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = -1
Query: 488 VAGIFFVADLDALKISHFLQMTPMLIKKMVVASQDAMPFRQKGTHYLNTPTGFETIFNTI 309
V I + D + L + H + + + ++ P K + P F +N I
Sbjct: 146 VETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLI 205
Query: 308 KALMNEKNKKRLYVHNQNYEE-MYKYIPKDILPVEYGG 198
K ++E +K++ V N++E + K+I D +PVEYGG
Sbjct: 206 KPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGG 243
>AL096881-1|CAB51405.1| 403|Homo sapiens hypothetical protein
protein.
Length = 403
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = -1
Query: 488 VAGIFFVADLDALKISHFLQMTPMLIKKMVVASQDAMPFRQKGTHYLNTPTGFETIFNTI 309
V I + D + L + H + + + ++ P K + P F +N I
Sbjct: 146 VETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLI 205
Query: 308 KALMNEKNKKRLYVHNQNYEE-MYKYIPKDILPVEYGG 198
K ++E +K++ V N++E + K+I D +PVEYGG
Sbjct: 206 KPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGG 243
>AK223587-1|BAD97307.1| 403|Homo sapiens SEC14-like 2 variant
protein.
Length = 403
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = -1
Query: 488 VAGIFFVADLDALKISHFLQMTPMLIKKMVVASQDAMPFRQKGTHYLNTPTGFETIFNTI 309
V I + D + L + H + + + ++ P K + P F +N I
Sbjct: 146 VETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLI 205
Query: 308 KALMNEKNKKRLYVHNQNYEE-MYKYIPKDILPVEYGG 198
K ++E +K++ V N++E + K+I D +PVEYGG
Sbjct: 206 KPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGG 243
>AC004832-1|AAF19256.1| 403|Homo sapiens WUGSC:H_DJ0539M06.1
protein.
Length = 403
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = -1
Query: 488 VAGIFFVADLDALKISHFLQMTPMLIKKMVVASQDAMPFRQKGTHYLNTPTGFETIFNTI 309
V I + D + L + H + + + ++ P K + P F +N I
Sbjct: 146 VETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLI 205
Query: 308 KALMNEKNKKRLYVHNQNYEE-MYKYIPKDILPVEYGG 198
K ++E +K++ V N++E + K+I D +PVEYGG
Sbjct: 206 KPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGG 243
>AB033012-1|BAA86500.2| 405|Homo sapiens KIAA1186 protein protein.
Length = 405
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = -1
Query: 488 VAGIFFVADLDALKISHFLQMTPMLIKKMVVASQDAMPFRQKGTHYLNTPTGFETIFNTI 309
V I + D + L + H + + + ++ P K + P F +N I
Sbjct: 148 VETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLI 207
Query: 308 KALMNEKNKKRLYVHNQNYEE-MYKYIPKDILPVEYGG 198
K ++E +K++ V N++E + K+I D +PVEYGG
Sbjct: 208 KPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGG 245
>BC043277-1|AAH43277.1| 839|Homo sapiens SYNJ2 protein protein.
Length = 839
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 215 PVEYGGNGGSIEEIIDYWRKKVKEYSDWLEEDDQYGTDESKRPG 84
PV N +EE D+ + D LE+D+ Y DE +PG
Sbjct: 330 PVSPTANSCLLEENFDFTSLDYESEGDILEDDEDYLVDEFNQPG 373
>AY152396-1|AAN73051.1| 1288|Homo sapiens synaptojanin 2A protein.
Length = 1288
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 215 PVEYGGNGGSIEEIIDYWRKKVKEYSDWLEEDDQYGTDESKRPG 84
PV N +EE D+ + D LE+D+ Y DE +PG
Sbjct: 987 PVSPTANSCLLEENFDFTSLDYESEGDILEDDEDYLVDEFNQPG 1030
>AL591375-2|CAI12099.1| 1652|Homo sapiens NHS-like 1 protein.
Length = 1652
Score = 30.3 bits (65), Expect = 5.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 146 EYSDWLEEDDQYGTDESKRPGKPKTAEDMF 57
E D+L+ED G DE P +P+T ED+F
Sbjct: 1377 EACDFLKED---GNDEVMTPSRPRTTEDLF 1403
>AL391669-2|CAI14157.1| 1652|Homo sapiens NHS-like 1 protein.
Length = 1652
Score = 30.3 bits (65), Expect = 5.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 146 EYSDWLEEDDQYGTDESKRPGKPKTAEDMF 57
E D+L+ED G DE P +P+T ED+F
Sbjct: 1377 EACDFLKED---GNDEVMTPSRPRTTEDLF 1403
>AL139330-4|CAI12983.1| 1496|Homo sapiens synaptojanin 2 protein.
Length = 1496
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 215 PVEYGGNGGSIEEIIDYWRKKVKEYSDWLEEDDQYGTDESKRPG 84
PV N +EE D+ + D LE+D+ Y DE +PG
Sbjct: 987 PVSPTANSCLLEENFDFTSLDYESEGDILEDDEDYLVDEFNQPG 1030
>AL139330-1|CAI12978.1| 581|Homo sapiens synaptojanin 2 protein.
Length = 581
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 215 PVEYGGNGGSIEEIIDYWRKKVKEYSDWLEEDDQYGTDESKRPG 84
PV N +EE D+ + D LE+D+ Y DE +PG
Sbjct: 72 PVSPTANSCLLEENFDFTSLDYESEGDILEDDEDYLVDEFNQPG 115
>AF318616-1|AAG46036.1| 1496|Homo sapiens synaptojanin 2 protein.
Length = 1496
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 215 PVEYGGNGGSIEEIIDYWRKKVKEYSDWLEEDDQYGTDESKRPG 84
PV N +EE D+ + D LE+D+ Y DE +PG
Sbjct: 987 PVSPTANSCLLEENFDFTSLDYESEGDILEDDEDYLVDEFNQPG 1030
>AF039945-1|AAD02178.1| 1443|Homo sapiens synaptojanin 2B protein.
Length = 1443
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 215 PVEYGGNGGSIEEIIDYWRKKVKEYSDWLEEDDQYGTDESKRPG 84
PV N +EE D+ + D LE+D+ Y DE +PG
Sbjct: 934 PVSPTANSCLLEENFDFTSLDYESEGDILEDDEDYLVDEFNQPG 977
>AB037778-1|BAA92595.1| 836|Homo sapiens KIAA1357 protein protein.
Length = 836
Score = 30.3 bits (65), Expect = 5.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 146 EYSDWLEEDDQYGTDESKRPGKPKTAEDMF 57
E D+L+ED G DE P +P+T ED+F
Sbjct: 561 EACDFLKED---GNDEVMTPSRPRTTEDLF 587
>AB002346-1|BAA20805.2| 1443|Homo sapiens KIAA0348 protein protein.
Length = 1443
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 215 PVEYGGNGGSIEEIIDYWRKKVKEYSDWLEEDDQYGTDESKRPG 84
PV N +EE D+ + D LE+D+ Y DE +PG
Sbjct: 934 PVSPTANSCLLEENFDFTSLDYESEGDILEDDEDYLVDEFNQPG 977
>U21551-1|AAB08528.1| 384|Homo sapiens ECA39 protein.
Length = 384
Score = 29.9 bits (64), Expect = 6.8
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 323 IFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNGGSIEEIIDYWRKKVKE 144
+F +KA NK RL+ N N + MY+ + LPV EE+++ ++ VK
Sbjct: 92 LFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLPV------FDKEELLECIQQLVKL 145
Query: 143 YSDWL 129
+W+
Sbjct: 146 DQEWV 150
>BC033864-1|AAH33864.1| 320|Homo sapiens BCAT1 protein protein.
Length = 320
Score = 29.9 bits (64), Expect = 6.8
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 323 IFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNGGSIEEIIDYWRKKVKE 144
+F +KA NK RL+ N N + MY+ + LPV EE+++ ++ VK
Sbjct: 93 LFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLPV------FDKEELLECIQQLVKL 146
Query: 143 YSDWL 129
+W+
Sbjct: 147 DQEWV 151
>AK056255-1|BAB71129.1| 386|Homo sapiens protein ( Homo sapiens
cDNA FLJ31693 fis, clone NT2RI2005710, highly similar to
BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, CYTOSOLIC
(EC ).
Length = 386
Score = 29.9 bits (64), Expect = 6.8
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 323 IFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNGGSIEEIIDYWRKKVKE 144
+F +KA NK RL+ N N + MY+ + LPV EE+++ ++ VK
Sbjct: 94 LFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLPV------FDKEELLECIQQLVKL 147
Query: 143 YSDWL 129
+W+
Sbjct: 148 DQEWV 152
>X87949-1|CAA61201.1| 653|Homo sapiens BiP protein.
Length = 653
Score = 29.5 bits (63), Expect = 9.0
Identities = 23/95 (24%), Positives = 38/95 (40%)
Frame = -1
Query: 344 TPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNGGSIEEIIDY 165
TP E + N + E K + + +N E Y Y K+ + + G E +
Sbjct: 533 TPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKET 592
Query: 164 WRKKVKEYSDWLEEDDQYGTDESKRPGKPKTAEDM 60
K V+E +WLE ++ K K K E++
Sbjct: 593 MEKAVEEKIEWLESHQDADIEDFK--AKKKELEEI 625
>M19645-1|AAA52614.1| 653|Homo sapiens protein ( Human 78 kdalton
glucose-regulated protein (GRP78) gene, complete cds. ).
Length = 653
Score = 29.5 bits (63), Expect = 9.0
Identities = 23/95 (24%), Positives = 38/95 (40%)
Frame = -1
Query: 344 TPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNGGSIEEIIDY 165
TP E + N + E K + + +N E Y Y K+ + + G E +
Sbjct: 533 TPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKET 592
Query: 164 WRKKVKEYSDWLEEDDQYGTDESKRPGKPKTAEDM 60
K V+E +WLE ++ K K K E++
Sbjct: 593 MEKAVEEKIEWLESHQDADIEDFK--AKKKELEEI 625
>DQ385847-1|ABD04090.1| 654|Homo sapiens heat shock 70kDa protein 5
(glucose-regulated protein, 78kDa) protein.
Length = 654
Score = 29.5 bits (63), Expect = 9.0
Identities = 23/95 (24%), Positives = 38/95 (40%)
Frame = -1
Query: 344 TPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNGGSIEEIIDY 165
TP E + N + E K + + +N E Y Y K+ + + G E +
Sbjct: 534 TPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKET 593
Query: 164 WRKKVKEYSDWLEEDDQYGTDESKRPGKPKTAEDM 60
K V+E +WLE ++ K K K E++
Sbjct: 594 MEKAVEEKIEWLESHQDADIEDFK--AKKKELEEI 626
>BC112963-1|AAI12964.1| 655|Homo sapiens HSPA5 protein protein.
Length = 655
Score = 29.5 bits (63), Expect = 9.0
Identities = 23/95 (24%), Positives = 38/95 (40%)
Frame = -1
Query: 344 TPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNGGSIEEIIDY 165
TP E + N + E K + + +N E Y Y K+ + + G E +
Sbjct: 535 TPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKET 594
Query: 164 WRKKVKEYSDWLEEDDQYGTDESKRPGKPKTAEDM 60
K V+E +WLE ++ K K K E++
Sbjct: 595 MEKAVEEKIEWLESHQDADIEDFK--AKKKELEEI 627
>BC020235-1|AAH20235.1| 654|Homo sapiens heat shock 70kDa protein 5
(glucose-regulated protein, 78kDa) protein.
Length = 654
Score = 29.5 bits (63), Expect = 9.0
Identities = 23/95 (24%), Positives = 38/95 (40%)
Frame = -1
Query: 344 TPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNGGSIEEIIDY 165
TP E + N + E K + + +N E Y Y K+ + + G E +
Sbjct: 534 TPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKET 593
Query: 164 WRKKVKEYSDWLEEDDQYGTDESKRPGKPKTAEDM 60
K V+E +WLE ++ K K K E++
Sbjct: 594 MEKAVEEKIEWLESHQDADIEDFK--AKKKELEEI 626
>AJ271729-1|CAB71335.1| 654|Homo sapiens glucose-regulated protein
protein.
Length = 654
Score = 29.5 bits (63), Expect = 9.0
Identities = 23/95 (24%), Positives = 38/95 (40%)
Frame = -1
Query: 344 TPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNGGSIEEIIDY 165
TP E + N + E K + + +N E Y Y K+ + + G E +
Sbjct: 534 TPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKET 593
Query: 164 WRKKVKEYSDWLEEDDQYGTDESKRPGKPKTAEDM 60
K V+E +WLE ++ K K K E++
Sbjct: 594 MEKAVEEKIEWLESHQDADIEDFK--AKKKELEEI 626
>AF216292-1|AAF42836.1| 654|Homo sapiens endoplasmic reticulum
lumenal Ca2+ binding protein grp78 protein.
Length = 654
Score = 29.5 bits (63), Expect = 9.0
Identities = 23/95 (24%), Positives = 38/95 (40%)
Frame = -1
Query: 344 TPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNGGSIEEIIDY 165
TP E + N + E K + + +N E Y Y K+ + + G E +
Sbjct: 534 TPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKET 593
Query: 164 WRKKVKEYSDWLEEDDQYGTDESKRPGKPKTAEDM 60
K V+E +WLE ++ K K K E++
Sbjct: 594 MEKAVEEKIEWLESHQDADIEDFK--AKKKELEEI 626
>AF188611-1|AAF13605.1| 639|Homo sapiens BiP protein protein.
Length = 639
Score = 29.5 bits (63), Expect = 9.0
Identities = 23/95 (24%), Positives = 38/95 (40%)
Frame = -1
Query: 344 TPTGFETIFNTIKALMNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNGGSIEEIIDY 165
TP E + N + E K + + +N E Y Y K+ + + G E +
Sbjct: 516 TPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKET 575
Query: 164 WRKKVKEYSDWLEEDDQYGTDESKRPGKPKTAEDM 60
K V+E +WLE ++ K K K E++
Sbjct: 576 MEKAVEEKIEWLESHQDADIEDFK--AKKKELEEI 608
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,245,768
Number of Sequences: 237096
Number of extensions: 1856885
Number of successful extensions: 12122
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 11987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12119
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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