Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11a07
(891 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF079312-1|AAC28093.1| 271|Anopheles gambiae 60S ribosomal prot... 319 6e-89
AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease pr... 25 2.3
AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450 pr... 25 3.1
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 24 5.4
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 24 5.4
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 24 7.1
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 7.1
AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein... 24 7.1
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 24 7.1
DQ974162-1|ABJ52802.1| 418|Anopheles gambiae serpin 3 protein. 23 9.4
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 23 9.4
>AF079312-1|AAC28093.1| 271|Anopheles gambiae 60S ribosomal protein
rpL7a protein.
Length = 271
Score = 319 bits (784), Expect = 6e-89
Identities = 146/230 (63%), Positives = 180/230 (78%)
Frame = -3
Query: 697 LFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 518
LFEKR KN+ IGQ +QP RDLSRFV+WPKYIRIQR +A+LQ+RLK+PPPINQFTQTLDK
Sbjct: 37 LFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLDKP 96
Query: 517 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXKRPNTIRSGTNTVTKLVEKK 338
TA+ + K +KYRPE KR N +R G N+V K+VE+K
Sbjct: 97 TAQQVMKCWKKYRPENPIARVQRLKAKAEAKAAGKEEPPSKRANQLRQGINSVVKMVEQK 156
Query: 337 KAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESG 158
KAQLV+IAHDVDPIELV++LPALCRKMGVPYCI+KGK+RLG LV+RKTCTC+ALT E+
Sbjct: 157 KAQLVIIAHDVDPIELVVYLPALCRKMGVPYCIIKGKARLGTLVYRKTCTCVALTQFENA 216
Query: 157 DRASFSKVVEAIKTNFNERYEELRKHWGGGVLGNKSNARIAKLEKAKARE 8
D+ + +K+VE IKTNFN+R++++R+HWGGG+LG KS AR+AKLEKAK RE
Sbjct: 217 DKPNLAKLVETIKTNFNDRFDDIRRHWGGGLLGPKSMARLAKLEKAKKRE 266
>AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease
protein.
Length = 435
Score = 25.4 bits (53), Expect = 2.3
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 544 G*SEGALSDDAEVQPSGAGCGYTWAILQIWTSHELAECPD-QWQSSLASSR 693
G +G + DA V+P GCG + L A+ + W +L SSR
Sbjct: 174 GLGDGPTARDATVRPEERGCGLSTKQLSKIAGGRPADSNEWPWMVALVSSR 224
>AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 25.0 bits (52), Expect = 3.1
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = -3
Query: 619 WPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 473
W ++ + + RLKV + T+T+++ A+ + L ++RPE
Sbjct: 216 WKLFLMTSYRSVARKLRLKVCS--RELTETVERVAAEAINSKLHEHRPE 262
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 24.2 bits (50), Expect = 5.4
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 464 CFSLRPVFLQNLEKALSCSLVQCLGKLVDRRGH 562
CF + V ++ + S + + L + V RRGH
Sbjct: 1454 CFVTKAVHIELVSNLTSSAFLAALRRFVARRGH 1486
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 24.2 bits (50), Expect = 5.4
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 607 YTWAI--LQIWTSHELAECPDQWQSSLASSRR 696
YT+A L++W S + EC + ++ S RR
Sbjct: 263 YTYARVGLELWGSKSIGECTQRQLDNIKSKRR 294
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.8 bits (49), Expect = 7.1
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 148 SFSKVVEAIKTNFNERYEELRKHWG 74
+FS+ + NF+ + EL++ WG
Sbjct: 1855 TFSRTIPFFGGNFSPEHTELQRTWG 1879
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.8 bits (49), Expect = 7.1
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 148 SFSKVVEAIKTNFNERYEELRKHWG 74
+FS+ + NF+ + EL++ WG
Sbjct: 1856 TFSRTIPFFGGNFSPEHTELQRTWG 1880
>AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 695
Score = 23.8 bits (49), Expect = 7.1
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 425 LSFSSFPQPLFPGCFSLRPVFLQNLEKAL 511
+ F F QP+F C+ L + L+N+ +
Sbjct: 506 IKFGLFFQPIFSVCWFLEVIALENVHSCV 534
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 23.8 bits (49), Expect = 7.1
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 628 IWTSHELAECPDQWQSSLASSRREDSRSSWAQPF*PPMGRR 750
+WT+ + CP Q Q L +++ + + + PP R+
Sbjct: 419 LWTT-VVRSCPSQRQRQLQQQQQQQQQQQQGERYVPPQLRQ 458
>DQ974162-1|ABJ52802.1| 418|Anopheles gambiae serpin 3 protein.
Length = 418
Score = 23.4 bits (48), Expect = 9.4
Identities = 11/69 (15%), Positives = 28/69 (40%)
Frame = +2
Query: 560 HFQTTLKYSLLALDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHDLLGLNLFDHQ 739
H +Y+ D + ++ +W+ T GK+ + + + D L + +
Sbjct: 141 HSIIAARYNATTQSVDFQDTQSAAAEINAWIAQNTRGKIQSIIKPDLLQDALMMLINTIY 200
Query: 740 WGGGYFLPY 766
+ G + +P+
Sbjct: 201 FKGSWSIPF 209
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 23.4 bits (48), Expect = 9.4
Identities = 8/34 (23%), Positives = 18/34 (52%)
Frame = -2
Query: 419 QER*ASTKEAQHHPIRHKHSHQVSREEEGAACGH 318
Q++ ++ Q H ++H H Q+S+ ++ H
Sbjct: 1316 QQQQQQHQQHQQHQLQHHHQPQLSQSSHHSSSSH 1349
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,921
Number of Sequences: 2352
Number of extensions: 16646
Number of successful extensions: 80
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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