Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc11a06
         (324 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   2.9  
AY146742-1|AAO12102.1|  154|Anopheles gambiae odorant-binding pr...    23   3.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   3.8  
DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.       22   5.0  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          22   5.0  
AY604021-1|AAT38515.1|  118|Anopheles gambiae LZ9988P protein.         22   5.0  
AY146735-1|AAO12095.1|  149|Anopheles gambiae odorant-binding pr...    22   5.0  
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    22   6.6  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 167 ILMNSLMYGFHFGRRMFCR*ALN 235
           +L+  + YGF F    FCR A N
Sbjct: 904 LLLKLVSYGFLFHDGAFCRSAFN 926


>AY146742-1|AAO12102.1|  154|Anopheles gambiae odorant-binding
           protein AgamOBP7 protein.
          Length = 154

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -2

Query: 221 CRTYVFRNESHTLGNSLKCIINKYDDV-EFC 132
           C   V  ++  T   ++KC  N +D+V +FC
Sbjct: 118 CSHIVTPDKCETAYETVKCYFNAHDEVIKFC 148


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
          protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 35 LSDLFLELPMQVFLW 79
          L DL + +P+Q FLW
Sbjct: 14 LQDLGVPVPVQTFLW 28


>DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.
          Length = 75

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 139 STSSYLFIIHFNEFPNVWLSFRKTYVLQ 222
           S +S LF++  +EF  V    RKT  L+
Sbjct: 33  SVTSILFLVSTSEFDQVLAEDRKTNRLE 60


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 87  DTSQRNTCIGSSKKRSERSRN 25
           DT+   T +G  KKRS RSR+
Sbjct: 391 DTAGGGT-VGDGKKRSSRSRS 410


>AY604021-1|AAT38515.1|  118|Anopheles gambiae LZ9988P protein.
          Length = 118

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +1

Query: 67  GVSLACILKCIFDSAG 114
           G  + C++KC F+  G
Sbjct: 44  GSKIKCLVKCFFEKTG 59


>AY146735-1|AAO12095.1|  149|Anopheles gambiae odorant-binding
           protein AgamOBP25 protein.
          Length = 149

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +1

Query: 67  GVSLACILKCIFDSAG 114
           G  + C++KC F+  G
Sbjct: 68  GSKIKCLVKCFFEKTG 83


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -1

Query: 138 ILWIYRSTPSRIKNAF*DTSQRNTCIGSSKKRSERSRN 25
           + WI    P + K  F +   ++TCI  +   S   RN
Sbjct: 139 LTWITTDLPVQTKPPFLNVVAKSTCIALTPTGSWTLRN 176


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,167
Number of Sequences: 2352
Number of extensions: 6540
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22045617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)