Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc11a06
(324 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000889-1|AAH00889.1| 133|Homo sapiens polymerase (RNA) I poly... 88 5e-18
AL136439-1|CAI16933.1| 133|Homo sapiens polymerase (RNA) I poly... 88 5e-18
X98433-1|CAA67075.1| 117|Homo sapiens RNA polymerase II subunit... 47 1e-05
X82385-1|CAA57785.1| 117|Homo sapiens RNA polymerase II subunit... 47 1e-05
L37127-1|AAD05361.1| 117|Homo sapiens RNA polymerase II protein. 47 1e-05
BC141830-1|AAI41831.1| 117|Homo sapiens POLR2J protein protein. 47 1e-05
BC139902-1|AAI39903.1| 117|Homo sapiens polymerase (RNA) II (DN... 47 1e-05
BC065711-1|AAH65711.1| 117|Homo sapiens POLR2J protein protein. 47 1e-05
BC024165-1|AAH24165.1| 117|Homo sapiens polymerase (RNA) II (DN... 47 1e-05
AJ277932-1|CAC18368.1| 127|Homo sapiens RPB11a protein protein. 47 1e-05
AJ277931-1|CAC18332.1| 115|Homo sapiens RPB11b1alpha protein pr... 47 1e-05
AJ277741-1|CAC18331.1| 115|Homo sapiens RPB11b2alpha protein pr... 47 1e-05
AJ277739-1|CAC18329.1| 115|Homo sapiens RPB11b1alpha protein pr... 47 1e-05
AF468111-1|AAL87672.1| 158|Homo sapiens DNA-directed RNA polyme... 47 1e-05
AC004084-4|AAP22342.1| 115|Homo sapiens unknown protein. 47 1e-05
AB209398-1|BAD92635.1| 180|Homo sapiens MGC13098 protein varian... 47 1e-05
BC105584-1|AAI05585.1| 138|Homo sapiens POLR2J4 protein protein. 44 1e-04
BC017341-1|AAH17341.2| 160|Homo sapiens MGC13098 protein protein. 44 1e-04
BC017250-1|AAH17250.1| 179|Homo sapiens MGC13098 protein protein. 44 1e-04
BC062722-1|AAH62722.1| 130|Homo sapiens POLR2J4 protein protein. 41 7e-04
Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein. 29 4.3
BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB dom... 29 4.3
AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB dom... 29 4.3
AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB dom... 29 4.3
BC126358-1|AAI26359.1| 1059|Homo sapiens acyl-Coenzyme A dehydro... 28 5.6
AY323912-1|AAQ88260.1| 1059|Homo sapiens ACAD 10 protein. 28 5.6
AK092356-1|BAC03869.1| 890|Homo sapiens protein ( Homo sapiens ... 28 5.6
U81031-2|AAC39524.2| 210|Homo sapiens SAS protein. 28 7.4
U01160-1|AAA17782.1| 210|Homo sapiens SAS protein. 28 7.4
CR407647-1|CAG28575.1| 210|Homo sapiens SAS protein. 28 7.4
BC010377-1|AAH10377.1| 210|Homo sapiens tetraspanin 31 protein. 28 7.4
AB209699-1|BAD92936.1| 205|Homo sapiens sarcoma amplified seque... 28 7.4
BC073800-1|AAH73800.1| 589|Homo sapiens ZBTB46 protein protein. 27 9.8
BC052269-1|AAH52269.1| 589|Homo sapiens ZBTB46 protein protein. 27 9.8
AL121845-12|CAI21885.1| 589|Homo sapiens zinc finger and BTB do... 27 9.8
AK131482-1|BAD18627.1| 589|Homo sapiens protein ( Homo sapiens ... 27 9.8
>BC000889-1|AAH00889.1| 133|Homo sapiens polymerase (RNA) I
polypeptide D, 16kDa protein.
Length = 133
Score = 88.2 bits (209), Expect = 5e-18
Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = -2
Query: 293 QTVIVKSNRMNISELPGDDDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPH 114
+T + + R E+ + C T+V E HTLGNSL+ +I K +VEFCGYT H
Sbjct: 15 KTSMAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTH 74
Query: 113 PAESKMHFRIQARET-PALEVLKRGLKDLEMVCDHTIN 3
P+ESK++ RIQ R T PA+E +RGL +L VC H ++
Sbjct: 75 PSESKINLRIQTRGTLPAVEPFQRGLNELMNVCQHVLD 112
>AL136439-1|CAI16933.1| 133|Homo sapiens polymerase (RNA) I
polypeptide D, 16kDa protein.
Length = 133
Score = 88.2 bits (209), Expect = 5e-18
Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = -2
Query: 293 QTVIVKSNRMNISELPGDDDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPH 114
+T + + R E+ + C T+V E HTLGNSL+ +I K +VEFCGYT H
Sbjct: 15 KTSMAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTH 74
Query: 113 PAESKMHFRIQARET-PALEVLKRGLKDLEMVCDHTIN 3
P+ESK++ RIQ R T PA+E +RGL +L VC H ++
Sbjct: 75 PSESKINLRIQTRGTLPAVEPFQRGLNELMNVCQHVLD 112
>X98433-1|CAA67075.1| 117|Homo sapiens RNA polymerase II subunit
protein.
Length = 117
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + K V F GY VPHP E K+ R+Q
Sbjct: 24 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQ 76
>X82385-1|CAA57785.1| 117|Homo sapiens RNA polymerase II subunit
protein.
Length = 117
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + K V F GY VPHP E K+ R+Q
Sbjct: 24 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQ 76
>L37127-1|AAD05361.1| 117|Homo sapiens RNA polymerase II protein.
Length = 117
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + K V F GY VPHP E K+ R+Q
Sbjct: 24 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQ 76
>BC141830-1|AAI41831.1| 117|Homo sapiens POLR2J protein protein.
Length = 117
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + K V F GY VPHP E K+ R+Q
Sbjct: 24 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQ 76
>BC139902-1|AAI39903.1| 117|Homo sapiens polymerase (RNA) II (DNA
directed) polypeptide J, 13.3kDa protein.
Length = 117
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + K V F GY VPHP E K+ R+Q
Sbjct: 24 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQ 76
>BC065711-1|AAH65711.1| 117|Homo sapiens POLR2J protein protein.
Length = 117
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + K V F GY VPHP E K+ R+Q
Sbjct: 24 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQ 76
>BC024165-1|AAH24165.1| 117|Homo sapiens polymerase (RNA) II (DNA
directed) polypeptide J, 13.3kDa protein.
Length = 117
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + K V F GY VPHP E K+ R+Q
Sbjct: 24 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQ 76
>AJ277932-1|CAC18368.1| 127|Homo sapiens RPB11a protein protein.
Length = 127
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + K V F GY VPHP E K+ R+Q
Sbjct: 24 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQ 76
>AJ277931-1|CAC18332.1| 115|Homo sapiens RPB11b1alpha protein
protein.
Length = 115
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + K V F GY VPHP E K+ R+Q
Sbjct: 23 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQ 75
>AJ277741-1|CAC18331.1| 115|Homo sapiens RPB11b2alpha protein
protein.
Length = 115
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + K V F GY VPHP E K+ R+Q
Sbjct: 23 DTKVPNACLFTMNKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQ 75
>AJ277739-1|CAC18329.1| 115|Homo sapiens RPB11b1alpha protein
protein.
Length = 115
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + K V F GY VPHP E K+ R+Q
Sbjct: 23 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQ 75
>AF468111-1|AAL87672.1| 158|Homo sapiens DNA-directed RNA
polymerase II subunit 11 protein.
Length = 158
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + K V F GY VPHP E K+ R+Q
Sbjct: 23 DTKVPNACLFTMNKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQ 75
>AC004084-4|AAP22342.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + K V F GY VPHP E K+ R+Q
Sbjct: 23 DTKVPNACLFTMNKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQ 75
>AB209398-1|BAD92635.1| 180|Homo sapiens MGC13098 protein variant
protein.
Length = 180
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + K V F GY VPHP E K+ R+Q
Sbjct: 45 DTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQ 97
>BC105584-1|AAI05585.1| 138|Homo sapiens POLR2J4 protein protein.
Length = 138
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYD-DVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + D V F GY VPHP E K+ R+Q
Sbjct: 45 DTKVPNACLFTINKEDHTLGNIIKSQCDLKDPQVLFAGYKVPHPLEHKIIIRVQ 98
>BC017341-1|AAH17341.2| 160|Homo sapiens MGC13098 protein protein.
Length = 160
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYD-DVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + D V F GY VPHP E K+ R+Q
Sbjct: 39 DTKVPNACLFTINKEDHTLGNIIKSQCDLKDPQVLFAGYKVPHPLEHKIIIRVQ 92
>BC017250-1|AAH17250.1| 179|Homo sapiens MGC13098 protein protein.
Length = 179
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYD-DVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + D V F GY VPHP E K+ R+Q
Sbjct: 43 DTKVPNACLFTINKEDHTLGNIIKSQCDLKDPQVLFAGYKVPHPLEHKIIIRVQ 96
>BC062722-1|AAH62722.1| 130|Homo sapiens POLR2J4 protein protein.
Length = 130
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 239 DDSGPTCRTYVFRNESHTLGNSLKCIINKYD-DVEFCGYTVPHPAESKMHFRIQ 81
D P + E HTLGN +K + D V F Y VPHP E K+ R+Q
Sbjct: 37 DTKVPNACLFTINKEDHTLGNIIKSQCDLKDPQVLFASYKVPHPLEHKIIIRVQ 90
>Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein.
Length = 803
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = -2
Query: 245 GDDDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQARETP 66
G + G TY R ES G+ +I+K +D CG H K H RI E P
Sbjct: 281 GSEARGLRSGTYGDRTESKAYGS----VIHKCED---CGKEFTHTGNFKRHIRIHTGEKP 333
>BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = -2
Query: 245 GDDDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQARETP 66
G + G TY R ES G+ +I+K +D CG H K H RI E P
Sbjct: 281 GSEARGLRSGTYGDRTESKAYGS----VIHKCED---CGKEFTHTGNFKRHIRIHTGEKP 333
>AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = -2
Query: 245 GDDDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQARETP 66
G + G TY R ES G+ +I+K +D CG H K H RI E P
Sbjct: 281 GSEARGLRSGTYGDRTESKAYGS----VIHKCED---CGKEFTHTGNFKRHIRIHTGEKP 333
>AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 variant protein.
Length = 803
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = -2
Query: 245 GDDDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQARETP 66
G + G TY R ES G+ +I+K +D CG H K H RI E P
Sbjct: 281 GSEARGLRSGTYGDRTESKAYGS----VIHKCED---CGKEFTHTGNFKRHIRIHTGEKP 333
>BC126358-1|AAI26359.1| 1059|Homo sapiens acyl-Coenzyme A
dehydrogenase family, member 10 protein.
Length = 1059
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 16 SHTISRSFRPLFRTSNAGVSLACILKCIFDSAGCGTVY 129
+H I R FR + +NAGV + +L DS+ GT +
Sbjct: 323 AHAIEREFRIMKALANAGVPVPNVLDLCEDSSVIGTPF 360
>AY323912-1|AAQ88260.1| 1059|Homo sapiens ACAD 10 protein.
Length = 1059
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 16 SHTISRSFRPLFRTSNAGVSLACILKCIFDSAGCGTVY 129
+H I R FR + +NAGV + +L DS+ GT +
Sbjct: 323 AHAIEREFRIMKALANAGVPVPNVLDLCEDSSVIGTPF 360
>AK092356-1|BAC03869.1| 890|Homo sapiens protein ( Homo sapiens
cDNA FLJ35037 fis, clone OCBBF2016729, moderately
similar to Probable acyl-CoA dehydrogenase - Deinococcus
radiodurans. ).
Length = 890
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 16 SHTISRSFRPLFRTSNAGVSLACILKCIFDSAGCGTVY 129
+H I R FR + +NAGV + +L DS+ GT +
Sbjct: 323 AHAIEREFRIMKALANAGVPVPNVLDLCEDSSVIGTPF 360
>U81031-2|AAC39524.2| 210|Homo sapiens SAS protein.
Length = 210
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 80 LVS*NAFLILLGVERYIHRIQHHHICL-*YILMNSLMYGFHFGRRMFCR*ALNRHHQ 247
+++ FL+L+ V + + HH + L Y+++ L++ F F C A+NR Q
Sbjct: 49 VIAVGVFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCL-AINRSKQ 104
>U01160-1|AAA17782.1| 210|Homo sapiens SAS protein.
Length = 210
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 80 LVS*NAFLILLGVERYIHRIQHHHICL-*YILMNSLMYGFHFGRRMFCR*ALNRHHQ 247
+++ FL+L+ V + + HH + L Y+++ L++ F F C A+NR Q
Sbjct: 49 VIAVGVFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCL-AINRSKQ 104
>CR407647-1|CAG28575.1| 210|Homo sapiens SAS protein.
Length = 210
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 80 LVS*NAFLILLGVERYIHRIQHHHICL-*YILMNSLMYGFHFGRRMFCR*ALNRHHQ 247
+++ FL+L+ V + + HH + L Y+++ L++ F F C A+NR Q
Sbjct: 49 VIAVGVFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCL-AINRSKQ 104
>BC010377-1|AAH10377.1| 210|Homo sapiens tetraspanin 31 protein.
Length = 210
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 80 LVS*NAFLILLGVERYIHRIQHHHICL-*YILMNSLMYGFHFGRRMFCR*ALNRHHQ 247
+++ FL+L+ V + + HH + L Y+++ L++ F F C A+NR Q
Sbjct: 49 VIAVGVFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCL-AINRSKQ 104
>AB209699-1|BAD92936.1| 205|Homo sapiens sarcoma amplified sequence
variant protein.
Length = 205
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 80 LVS*NAFLILLGVERYIHRIQHHHICL-*YILMNSLMYGFHFGRRMFCR*ALNRHHQ 247
+++ FL+L+ V + + HH + L Y+++ L++ F F C A+NR Q
Sbjct: 79 VIAVGVFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCL-AINRSKQ 134
>BC073800-1|AAH73800.1| 589|Homo sapiens ZBTB46 protein protein.
Length = 589
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = -2
Query: 302 NITQTVIVKSNRMNI-SELPGDDDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGY 126
N+ ++ K++ +++ +++ GDD G Y+ R +H+L + +I K +C +
Sbjct: 369 NLRAALMSKNSLLSLKADVLGDD--GSLLFEYLPRG-AHSLSLNEFTVIRKKFKCPYCSF 425
Query: 125 TVPHPAESKMHFRIQARETP-ALEVLKRGLKDLEMVCDHTI 6
+ H K H R E P E+ + E + HT+
Sbjct: 426 SAMHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTL 466
>BC052269-1|AAH52269.1| 589|Homo sapiens ZBTB46 protein protein.
Length = 589
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = -2
Query: 302 NITQTVIVKSNRMNI-SELPGDDDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGY 126
N+ ++ K++ +++ +++ GDD G Y+ R +H+L + +I K +C +
Sbjct: 369 NLRAALMSKNSLLSLKADVLGDD--GSLLFEYLPRG-AHSLSLNEFTVIRKKFKCPYCSF 425
Query: 125 TVPHPAESKMHFRIQARETP-ALEVLKRGLKDLEMVCDHTI 6
+ H K H R E P E+ + E + HT+
Sbjct: 426 SAMHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTL 466
>AL121845-12|CAI21885.1| 589|Homo sapiens zinc finger and BTB
domain containing 46 protein.
Length = 589
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = -2
Query: 302 NITQTVIVKSNRMNI-SELPGDDDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGY 126
N+ ++ K++ +++ +++ GDD G Y+ R +H+L + +I K +C +
Sbjct: 369 NLRAALMSKNSLLSLKADVLGDD--GSLLFEYLPRG-AHSLSLNEFTVIRKKFKCPYCSF 425
Query: 125 TVPHPAESKMHFRIQARETP-ALEVLKRGLKDLEMVCDHTI 6
+ H K H R E P E+ + E + HT+
Sbjct: 426 SAMHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTL 466
>AK131482-1|BAD18627.1| 589|Homo sapiens protein ( Homo sapiens
cDNA FLJ16656 fis, clone TESTI4038779, weakly similar
to Rattus norvegicus zinc finger protein RIN ZF (RINZF).
).
Length = 589
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = -2
Query: 302 NITQTVIVKSNRMNI-SELPGDDDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGY 126
N+ ++ K++ +++ +++ GDD G Y+ R +H+L + +I K +C +
Sbjct: 369 NLRAALMSKNSLLSLKADVLGDD--GSLLFEYLPRG-AHSLSLNEFTVIRKKFKCPYCSF 425
Query: 125 TVPHPAESKMHFRIQARETP-ALEVLKRGLKDLEMVCDHTI 6
+ H K H R E P E+ + E + HT+
Sbjct: 426 SAMHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTL 466
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,945,378
Number of Sequences: 237096
Number of extensions: 946073
Number of successful extensions: 6035
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 5929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6029
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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