Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10p13
(326 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 0.71
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 0.71
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 2.9
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 3.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 3.8
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 3.8
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 3.8
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 3.8
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 3.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 5.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 20 6.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 20 6.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 20 6.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 20 6.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 20 6.6
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 20 8.8
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 20 8.8
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 20 8.8
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 20 8.8
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 20 8.8
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 20 8.8
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 20 8.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 8.8
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 20 8.8
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 23.4 bits (48), Expect = 0.71
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = -1
Query: 206 LVNVWRGRVGGRMNVQS*NGLVETLLNRTQLRFYFAKRIKYFALSAHKQVANNRFKNVIF 27
L N+ +G G +NVQ L LL R L F + +KY + + Q+ + ++ +F
Sbjct: 361 LGNIVQGN-GDSVNVQLYGQL--DLLVRKVLGFGYESNVKYQVVPSALQMWSTSLRDPVF 417
Query: 26 FRTF 15
F +
Sbjct: 418 FSIY 421
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.4 bits (48), Expect = 0.71
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = -1
Query: 206 LVNVWRGRVGGRMNVQS*NGLVETLLNRTQLRFYFAKRIKYFALSAHKQVANNRFKNVIF 27
L N+ +G G +NVQ L LL R L F + +KY + + Q+ + ++ +F
Sbjct: 361 LGNIVQGN-GDSVNVQLYGQL--DLLVRKVLGFGYESNVKYQVVPSALQMWSTSLRDPVF 417
Query: 26 FRTF 15
F +
Sbjct: 418 FSIY 421
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.4 bits (43), Expect = 2.9
Identities = 10/40 (25%), Positives = 20/40 (50%)
Frame = -1
Query: 134 LLNRTQLRFYFAKRIKYFALSAHKQVANNRFKNVIFFRTF 15
LL R L F + +KY + + Q+ + ++ +FF +
Sbjct: 8 LLVRKVLGFGYESNVKYQVVPSALQMWSTSLRDPVFFSIY 47
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.0 bits (42), Expect = 3.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 21 PKEYYVLKSIISDLLMGAQGKVFD 92
P YY+ +SDLL G F+
Sbjct: 67 PTNYYLFNLAVSDLLFLILGLPFE 90
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 3.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 149 HFNFERSCGRQLARARH*QVARYD 220
H++ ERSC R R + RY+
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYE 253
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 3.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 149 HFNFERSCGRQLARARH*QVARYD 220
H++ ERSC R R + RY+
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYE 253
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 3.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 149 HFNFERSCGRQLARARH*QVARYD 220
H++ ERSC R R + RY+
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYE 253
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 3.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 149 HFNFERSCGRQLARARH*QVARYD 220
H++ ERSC R R + RY+
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYE 253
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 3.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 149 HFNFERSCGRQLARARH*QVARYD 220
H++ ERSC R R + RY+
Sbjct: 219 HYSRERSCSRDRNREYRKKDRRYE 242
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.6 bits (41), Expect = 5.0
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 149 HFNFERSCGRQLARARH*QVARYD 220
H++ ERSC R R + RY+
Sbjct: 230 HYSRERSCSRDRNREYKEKDRRYE 253
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 6.6
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 71 RSRQSI*SALRSKNATVCDSGESQRGHF--NFERSCGRQLARARH*QVARYD 220
RSR S ++ DS R + + ERSC R +R + RYD
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRRYD 269
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 6.6
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 71 RSRQSI*SALRSKNATVCDSGESQRGHF--NFERSCGRQLARARH*QVARYD 220
RSR S ++ DS R + + ERSC R +R + RYD
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRRYD 269
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 6.6
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 71 RSRQSI*SALRSKNATVCDSGESQRGHF--NFERSCGRQLARARH*QVARYD 220
RSR S ++ DS R + + ERSC R +R + RYD
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRRYD 269
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 6.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 125 DSGESQRGHFNFERSCGRQLARARH*QVARYD 220
+ G S R + ERSC R +R + RYD
Sbjct: 240 EDGNSYRN--DGERSCSRDRSREYKKKDRRYD 269
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.2 bits (40), Expect = 6.6
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 71 RSRQSI*SALRSKNATVCDSGESQRGHF--NFERSCGRQLARARH*QVARYD 220
RSR S ++ DS R + + ERSC R +R + RYD
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRRYD 269
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 161 ERSCGRQLARARH*QVARYD 220
ERSC R +R + RYD
Sbjct: 1 ERSCSRDRSREYKKKDRRYD 20
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 161 ERSCGRQLARARH*QVARYD 220
ERSC R +R + RYD
Sbjct: 1 ERSCSRDRSREYKKKDRRYD 20
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 161 ERSCGRQLARARH*QVARYD 220
ERSC R +R + RYD
Sbjct: 1 ERSCSRDRSREYKKKDRRYD 20
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 161 ERSCGRQLARARH*QVARYD 220
ERSC R +R + RYD
Sbjct: 1 ERSCSRDRSREYKKKDRRYD 20
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 161 ERSCGRQLARARH*QVARYD 220
ERSC R +R + RYD
Sbjct: 1 ERSCSRDRSREYKKKDRRYD 20
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 8.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 161 ERSCGRQLARARH*QVARYD 220
ERSC R +R + RYD
Sbjct: 1 ERSCSRDRSREYKKKDRRYD 20
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 161 ERSCGRQLARARH*QVARYD 220
ERSC R +R + RYD
Sbjct: 250 ERSCSRDRSREYKKKDRRYD 269
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 161 ERSCGRQLARARH*QVARYD 220
ERSC R +R + RYD
Sbjct: 250 ERSCSRDRSREYKKKDRRYD 269
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.8 bits (39), Expect = 8.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 27 EYYVLKSIISDLLMGAQGK 83
E +LKSI+ L + QG+
Sbjct: 129 EVNILKSIVGQLQVDTQGE 147
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,793
Number of Sequences: 438
Number of extensions: 1429
Number of successful extensions: 24
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7217694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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