Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10p07
(846 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_04_0120 + 16242220-16242483,16242538-16243424,16244604-162452... 37 0.023
09_01_0015 + 370242-370306,370429-370497,371087-371161,371558-37... 33 0.29
07_01_0015 + 108338-109186 33 0.29
07_03_1455 - 26659480-26659758,26659907-26660149 31 1.5
04_01_0299 - 3995709-3996185,3996209-3997075,3997142-3997252,399... 31 1.5
03_06_0014 - 31012116-31012229,31012773-31012985,31013058-310131... 31 1.5
12_01_0014 + 105422-105520,105598-105725,105939-106101,106198-10... 30 2.0
11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-11... 30 2.0
07_03_1503 + 27017933-27018063,27019668-27019727,27019996-270201... 30 2.0
07_01_1078 - 9707125-9707640,9708091-9708306,9708312-9709685,970... 30 2.0
03_02_0774 + 11074508-11074880,11076270-11076370,11076453-110765... 30 2.0
08_02_0002 + 11173365-11173512,11173528-11178470 30 2.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 2.7
02_01_0284 + 1907249-1907665,1907816-1907859,1909508-1909546,190... 30 2.7
08_02_0010 - 11230407-11232416 29 3.5
08_02_0009 + 11216532-11218687,11220727-11225998 29 3.5
08_02_0006 + 11204835-11206382 29 3.5
08_02_0003 + 11180421-11180757,11180773-11185715 29 3.5
04_04_0483 - 25554531-25554605,25554681-25555644,25555722-255558... 29 3.5
02_05_1277 - 35408097-35409080 29 3.5
11_01_0096 - 719749-719851,719957-720074,720562-720922 29 4.7
08_01_0429 + 3767486-3768022,3768247-3768523,3769132-3769364,377... 29 4.7
08_01_0134 + 1067826-1068158 29 4.7
01_05_0779 + 25128320-25128518,25129048-25129141,25129867-251300... 29 4.7
12_02_0063 + 13098519-13099585,13099759-13099906 29 6.2
09_03_0121 - 12507258-12507968 29 6.2
06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199... 29 6.2
01_06_0133 - 26793335-26793380,26793696-26793907,26794009-267941... 29 6.2
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 28 8.1
11_06_0610 - 25449085-25453284 28 8.1
09_02_0224 - 5984128-5984923,5985667-5986718,5986800-5987776,598... 28 8.1
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739... 28 8.1
05_05_0173 + 22956927-22958615 28 8.1
02_05_0492 - 29476883-29476949,29477030-29477166,29477292-294773... 28 8.1
02_05_0276 + 27378994-27380094,27380185-27380250,27380586-273806... 28 8.1
01_01_1182 + 9423610-9424041,9424654-9424721,9424979-9425177,942... 28 8.1
>01_04_0120 +
16242220-16242483,16242538-16243424,16244604-16245264,
16245582-16245943,16246071-16246140,16246666-16246740
Length = 772
Score = 36.7 bits (81), Expect = 0.023
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Frame = -2
Query: 584 RLKPAQKRPQSEIIPKNSTTKNLIADVLVDTINRRRVAMAKSSSEATSNDEGWDDGGN-- 411
RL +KRPQ + P +S A + ++ N R + ++ + +G ++ GN
Sbjct: 66 RLDDHEKRPQGTVKPLDSHV-TCEAMYMGNSNNGYRPQGGQGWNQPRPSYQGGNNNGNFS 124
Query: 410 NRPNAPDVKYVQALFNVFTSSQLYTNDSDEKNTKAHNILNDVESLLQNKTQTNIDKARLL 231
N+P+ D+ + QA S L ND KNT + + S QN+ N
Sbjct: 125 NQPSLKDLVFAQAKTTDALSKMLAANDKILKNTNVNQ--DGFASAFQNQLSFN-KMIETQ 181
Query: 230 LQDLASRVVLSEN 192
L LAS V +E+
Sbjct: 182 LAQLASLVTANES 194
>09_01_0015 +
370242-370306,370429-370497,371087-371161,371558-371591,
371659-373132,373193-373310,373374-373419
Length = 626
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -2
Query: 353 SSQLYTNDSDEKNTKAHNILNDVESLLQNKTQTNIDKARLLLQD 222
S ++ D EKN KA ++ +E++L N ++ +DK R +L D
Sbjct: 580 SYDIFAIDPAEKNQKADIVIKAIENVLPNLPKSCMDKVRRMLHD 623
>07_01_0015 + 108338-109186
Length = 282
Score = 33.1 bits (72), Expect = 0.29
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = -2
Query: 683 PLQPPLVDLPAEMLPPPAPSLSNVLSELKS-GTVRLKPAQKRPQSEIIPKNSTTKNLIAD 507
P PPL LPA P +PS ++L ++ S + Q Q ++ NS+ + IA
Sbjct: 110 PPPPPL--LPAAAAAPDSPSPPSLLLQISSPKSTTADHHQNHQQLQLQGTNSSPNSCIAT 167
Query: 506 VLVDTINRRR--VAMAKSSSEATSNDEGWDDG 417
++ ++ N+ R + + + AT++D G G
Sbjct: 168 IIKESRNKARLFITTMPAPAPATTHDLGLGGG 199
>07_03_1455 - 26659480-26659758,26659907-26660149
Length = 173
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 656 PAEMLPPPAPSLSNVLSELKSGTVRLKPAQKRPQSEIIPKNS 531
P + P A SL L++G L+PA +RP ++ PK +
Sbjct: 77 PGDHRNPAASSLHPTAPPLRAGPGHLRPATRRPPRQVRPKEN 118
>04_01_0299 -
3995709-3996185,3996209-3997075,3997142-3997252,
3997535-3997888
Length = 602
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = -2
Query: 434 EGWDDGGN--NRPNAPDVKYVQALFNVFTSSQLYTNDSDEKNTKAHNILNDVESLLQNKT 261
+G ++ GN N+P+ D+ + QA S +L TND +N L+ S QNK
Sbjct: 237 QGGNNNGNFSNQPSLKDLVFAQAKTTDALSKKLATNDKVLENINIK--LDGFASAFQNKL 294
Query: 260 QTNIDKARLLLQDLASRVVLSE 195
N L LAS V+ +E
Sbjct: 295 SFN-KMIETQLTQLASLVLTNE 315
>03_06_0014 -
31012116-31012229,31012773-31012985,31013058-31013171,
31013909-31014040,31014624-31014692,31014763-31015017,
31015347-31015520,31016104-31016280,31016999-31017107,
31017343-31017506,31018221-31018517
Length = 605
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Frame = -2
Query: 698 DLSSAPLQPPLVDLPAEMLPPPAPSLSNVLSELKSGTVRLKP--AQKRPQSEIIPKNSTT 525
+L PL PPL + MLPP P NV+ V KP + + + + S +
Sbjct: 224 ELKDKPLGPPLNLVVPRMLPPGQPDRMNVIKVSNIMGVNPKPFDPETYVEEDALTDESGS 283
Query: 524 KNLIADVLVDTINRRRV---AMAKSSSEATSNDEGWDDG 417
+ I L D I R ++ A S E+ + W DG
Sbjct: 284 RKKIR--LEDNIVRWKIVKNADGTESRESNARFVKWKDG 320
>12_01_0014 +
105422-105520,105598-105725,105939-106101,106198-106310,
106787-106825,107026-107109,107193-107241,107331-107422,
107680-107809,107906-107982,108058-109676,110024-110221,
110287-110825
Length = 1109
Score = 30.3 bits (65), Expect = 2.0
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Frame = -2
Query: 629 PSLSNVLSELKSGTVRLKPAQKRPQSEIIPKNSTTKNLIADVLVDTINRRRVAMAKSSSE 450
P +++ +S+ ++GTV PA+ S ++ K+ I + + +T N+ R++ SSS
Sbjct: 260 PQMASNVSQRRAGTVLPPPAEDFSYSAVV----AAKHPIKNGITNTANQSRLSPPNSSSG 315
Query: 449 ATSNDEGWDDGG---NNRPNAPDVKYVQAL--FNVFTSSQLYTNDSDEKNTKAHNILNDV 285
++ G N R A V Q+L S +++ S +TK + ND
Sbjct: 316 RSTLPPAASWGHRDLNTRTTATGVASSQSLTKSKADPQSNSFSSSSTVSSTKLPSSWNDD 375
Query: 284 ESLLQNKTQ 258
S + T+
Sbjct: 376 TSTVPKMTE 384
>11_01_0014 +
108647-108816,109704-109803,109891-110018,110232-110394,
110491-110603,111080-111118,111319-111402,111486-111534,
111624-111715,111999-112128,112225-112301,112377-113995,
114348-114545,114635-115173
Length = 1166
Score = 30.3 bits (65), Expect = 2.0
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = -2
Query: 629 PSLSNVLSELKSGTVRLKPAQKRPQSEIIPKNSTTKNLIADVLVDTINRRRVAMAKSSSE 450
P +++ +S+ ++GTV PA+ S ++ K+ I + + +T N+ R++ SSS
Sbjct: 317 PQMASSVSQRRAGTVLPPPAEDFSYSAVV----AAKHPIKNGITNTANQSRLSPPNSSSG 372
Query: 449 ATSNDEGWDDGG---NNRPNAPDVKYVQALFNVFT--SSQLYTNDSDEKNTKAHNILND 288
++ G N R A V Q+L T S +++ S +TK + ND
Sbjct: 373 RSTLPPAASWGHRDLNTRTTATGVASSQSLTKSKTDPQSNSFSSSSTVSSTKLPSSWND 431
>07_03_1503 + 27017933-27018063,27019668-27019727,27019996-27020101,
27020254-27020325,27021008-27021061,27021707-27021856,
27022206-27022547,27022651-27024684,27024706-27024947,
27025658-27026235,27026329-27028183,27028533-27028851,
27028980-27029417
Length = 2126
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -2
Query: 692 SSAPLQPPLVDLPAEMLPPPAPSLSNVLSELKSGTVRLKPAQKRPQSEIIPKNSTTKNLI 513
++ P+ PP P PP SL+ LS L+SGT P QK + +P N + +N
Sbjct: 1999 AAMPVLPPSRH-PCISCQPPQLSLA-ALSPLQSGTSTSGPQQKGNSTSWVPTNVSIRNKA 2056
Query: 512 A 510
A
Sbjct: 2057 A 2057
>07_01_1078 -
9707125-9707640,9708091-9708306,9708312-9709685,
9709704-9710044,9710120-9710198
Length = 841
Score = 30.3 bits (65), Expect = 2.0
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = -2
Query: 434 EGWDDGGN--NRPNAPDVKYVQALFNVFTSSQLYTNDSDEKNTKAHNILNDVESLLQNKT 261
EG +D GN N+P+ D+ + QA S +L ND KN L+ S QN+
Sbjct: 238 EGGNDNGNFSNQPSLKDLVFAQAKTIDALSKKLAANDKILKNINVK--LDGFASAFQNQL 295
Query: 260 QTNIDKARLLLQDLASRVVLSEN 192
N L LAS V +E+
Sbjct: 296 SFN-KMIETQLAQLASLVPANES 317
>03_02_0774 +
11074508-11074880,11076270-11076370,11076453-11076509,
11076596-11076690,11077480-11077579,11078272-11078330,
11078874-11079001,11079362-11079440,11079708-11079795,
11080490-11080590,11080822-11080900,11081740-11081850,
11082655-11082750,11082885-11083007,11085750-11085947,
11086071-11086172,11086570-11086634,11086888-11087008,
11088540-11088697,11088823-11088973,11089414-11089521,
11089939-11090031,11090285-11090321,11090659-11090906,
11091396-11091542,11091929-11092099,11092166-11092175,
11093360-11093505
Length = 1114
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2
Query: 692 SSAPLQPPLVDLPAEMLPPPAPSLSNVLSELKSGTVRLKPAQKRPQSEIIP 540
S AP PL+ LP ++PP A ++ + PA P++E+ P
Sbjct: 24 SPAPPPRPLLLLPKTLIPPAAAAMEFPRRGRRDVAAASAPASSSPETEVAP 74
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Frame = -2
Query: 365 NVFTSSQLYTNDSDEKNTKAHNILNDVESLLQN-----------KTQTNIDKARLLLQDL 219
N+ Q + ++ +TK H+I+ +L N +TQ +D
Sbjct: 1325 NINNLLQSFPHNKPSSSTKRHDIIPQTPYILHNHPNLFLPQYILRTQPKAPCRSCAYKDS 1384
Query: 218 ASRVVLSENPLDSPAIGLQKQPLFETNRNL--FYKSIEDLIFKFRYKDAENHLIFAL 54
+ + S+NP+ + LQ + F+T + L F + I DLI++ ++K+ + + L
Sbjct: 1385 CKKKLKSQNPMSTTYENLQPRLSFKTEQTLSCFGQDILDLIWQ-KFKERQMKIFLGL 1440
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 689 SAPLQPPLVDLPAEMLPPPAPSLS 618
S P QPPL P PPP P LS
Sbjct: 1153 SPPCQPPLPPSPPPATPPPPPPLS 1176
>02_01_0284 +
1907249-1907665,1907816-1907859,1909508-1909546,
1909791-1910112,1910803-1910892,1911541-1911609,
1911969-1912074,1912146-1912234,1912349-1912461,
1912555-1912657
Length = 463
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/74 (21%), Positives = 37/74 (50%)
Frame = -2
Query: 644 LPPPAPSLSNVLSELKSGTVRLKPAQKRPQSEIIPKNSTTKNLIADVLVDTINRRRVAMA 465
+PPP PS LS+ K+ ++ +K ++ + +L D +++ + ++ A
Sbjct: 15 VPPPRPSFEESLSKRKASEKQVGDTEKDENADKSAEYELPDSLSLDDYAESLGKLNIS-A 73
Query: 464 KSSSEATSNDEGWD 423
+SSS+ + + +D
Sbjct: 74 ESSSKGEATNSAFD 87
>08_02_0010 - 11230407-11232416
Length = 669
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Frame = -2
Query: 365 NVFTSSQLYTNDSDEKNTKAHNILNDVESLLQN-----------KTQTNIDKARLLLQDL 219
N+ Q + ++ +TK H+I+ +L N +TQ +D
Sbjct: 298 NINNLLQSFPHNKPSSSTKRHDIIPQTPYILHNHPNLFLPQYILRTQPKAPCRSCAYKDS 357
Query: 218 ASRVVLSENPLDSPAIGLQKQPLFETNRNL--FYKSIEDLIFKFRYKDAENHLIFAL 54
+ + S+NP+ + LQ + F+T + L F + I DL+++ ++K+ + + L
Sbjct: 358 CKKKLKSQNPMSTTYENLQPRLSFKTEQTLSCFGQDILDLVWQ-KFKERQMKIFLGL 413
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Frame = -2
Query: 365 NVFTSSQLYTNDSDEKNTKAHNILNDVESLLQN-----------KTQTNIDKARLLLQDL 219
N+ Q + ++ +TK H+I+ +L N +TQ +D
Sbjct: 2104 NINNLLQSFPHNKPSSSTKRHDIIPQTPYILHNHPNLFLPQYILRTQPKAPCRSCAYKDS 2163
Query: 218 ASRVVLSENPLDSPAIGLQKQPLFETNRNL--FYKSIEDLIFKFRYKDAENHLIFAL 54
+ + S+NP+ + LQ + F+T + L F + I DL+++ ++K+ + + L
Sbjct: 2164 CKKKLKSQNPMSTTYENLQPRLSFKTEQTLSCFGQDILDLVWQ-KFKERQMKIFLGL 2219
>08_02_0006 + 11204835-11206382
Length = 515
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Frame = -2
Query: 365 NVFTSSQLYTNDSDEKNTKAHNILNDVESLLQN-----------KTQTNIDKARLLLQDL 219
N+ Q + ++ +TK H+I+ +L N +TQ +D
Sbjct: 144 NINNLLQSFPHNKPSSSTKRHDIIPQTPYILHNHPNLFLPQYILRTQPKAPCRSCAYKDS 203
Query: 218 ASRVVLSENPLDSPAIGLQKQPLFETNRNL--FYKSIEDLIFKFRYKDAENHLIFAL 54
+ + S+NP+ + LQ + F+T + L F + I DL+++ ++K+ + + L
Sbjct: 204 CKKKLKSQNPMSTTYENLQPRLSFKTEQTLSCFGQDILDLVWQ-KFKERQMKIFLGL 259
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Frame = -2
Query: 365 NVFTSSQLYTNDSDEKNTKAHNILNDVESLLQN-----------KTQTNIDKARLLLQDL 219
N+ Q + ++ +TK H+I+ +L N +TQ +D
Sbjct: 1388 NINNLLQSFPHNKPSSSTKRHDIIPQTPYILHNHPNLFLPQYILRTQPKAPCRSCAYKDS 1447
Query: 218 ASRVVLSENPLDSPAIGLQKQPLFETNRNL--FYKSIEDLIFKFRYKDAENHLIFAL 54
+ + S+NP+ + LQ + F+T + L F + I DL+++ ++K+ + + L
Sbjct: 1448 CKKKLKSQNPMSTTYENLQPRLSFKTEQTLSCFGQDILDLVWQ-KFKERQMKIFLGL 1503
>04_04_0483 -
25554531-25554605,25554681-25555644,25555722-25555847,
25556162-25556331,25556431-25556526
Length = 476
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/85 (22%), Positives = 40/85 (47%)
Frame = -2
Query: 569 QKRPQSEIIPKNSTTKNLIADVLVDTINRRRVAMAKSSSEATSNDEGWDDGGNNRPNAPD 390
++ P+ + +N K++ DVL+ +R R S SE ++ G DD + + +
Sbjct: 165 EEPPEPVSMVENEDGKHMQKDVLLPENHRYRNC---SDSEEEEDEYGEDDNYGDDSDEEE 221
Query: 389 VKYVQALFNVFTSSQLYTNDSDEKN 315
+V ++ +LYT D +++
Sbjct: 222 EDFVDCKIDLVDKDELYTEDIKQES 246
>02_05_1277 - 35408097-35409080
Length = 327
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 683 PLQPPLVDLPAEMLPPPAPSLSNVLSE 603
P QPP++ PA PPP P + V SE
Sbjct: 67 PAQPPVLAAPAPAPPPPQPPVVVVKSE 93
>11_01_0096 - 719749-719851,719957-720074,720562-720922
Length = 193
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 683 PLQPPLV-DLPAEMLPPPAPSLSNVLSE 603
P +PPL DLPA PPP PS ++ E
Sbjct: 30 PPEPPLASDLPARSPPPPYPSARILVDE 57
>08_01_0429 +
3767486-3768022,3768247-3768523,3769132-3769364,
3773221-3773625,3773717-3773755
Length = 496
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -2
Query: 608 SELKSGTVRLKPAQKRPQSEIIPKNSTTKNLIADVLVDTINRRRVAMAKSSSEATSN 438
+ L+ VR+ P+Q RP+ I + + TKNL+A RR++ + + A N
Sbjct: 156 TSLRWEVVRVTPSQVRPELPIATECNLTKNLVAACFPPL--RRQIQFVTAGAGAAGN 210
>08_01_0134 + 1067826-1068158
Length = 110
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 692 SSAPLQPPLVDLPAEMLPPPAPSLSNVLSELKS 594
SS P PP + P PPP P+ S +SE+ S
Sbjct: 7 SSRPPPPPPLPRPHPAPPPPCPAASLQMSEMHS 39
>01_05_0779 +
25128320-25128518,25129048-25129141,25129867-25130078,
25130924-25131054,25131933-25132041,25132180-25132659,
25133194-25133531,25133810-25133977
Length = 576
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 344 LYTNDSDEKNTKAHNILNDVESLLQNKTQTNIDKARLLLQDLASRVVLSENPL 186
L ND++E+N +D S LQ K + ++ +D+A + E PL
Sbjct: 324 LSLNDTEEQNNSTDEFPDDTSSYLQMKPSDSETESNYASRDVAVTEYVDEKPL 376
>12_02_0063 + 13098519-13099585,13099759-13099906
Length = 404
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Frame = -2
Query: 689 SAPLQPP--LVDLPAEMLPPP------APSLSNVLSELKSGTVRLKPAQKRPQSEIIPKN 534
SA L PP LV P E+ PPP AP ++ T + P QKRP + +
Sbjct: 165 SAALPPPQELVPPPQELAPPPYPAAQAAPQAPAPPRQVPVITQQQAPPQKRPAAPVAEPP 224
Query: 533 STTKNL 516
TK +
Sbjct: 225 CATKKM 230
>09_03_0121 - 12507258-12507968
Length = 236
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -2
Query: 704 MIDLSSAPLQPPLVDLPAEMLPPP---APSLSNVLSELKSGTVRLKPAQKRPQS 552
+ID +S P PL+ LPA LP P APSL + S L + L P S
Sbjct: 77 LIDAASRP-HLPLLHLPAASLPDPLRLAPSLRALASRLDPLPLALSSLASPPSS 129
>06_01_0268 +
1989069-1989293,1989938-1990020,1990136-1990357,
1990434-1990621,1990711-1990835,1990988-1991039,
1991585-1991874,1992229-1992307,1992527-1992657
Length = 464
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -2
Query: 680 LQPPLVDLPAEMLPPPAPSLSNVLSELKSGTVRLKP 573
L PL +PA P PAPSL + L L++ T R+ P
Sbjct: 303 LASPLAHVPASSCPLPAPSLFSSLPLLRA-TFRVHP 337
>01_06_0133 -
26793335-26793380,26793696-26793907,26794009-26794134,
26794258-26794335,26794857-26795014,26795230-26795278,
26795369-26795414,26795527-26795654,26796154-26796237,
26796317-26796409,26796505-26796549,26796792-26796851
Length = 374
Score = 28.7 bits (61), Expect = 6.2
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Frame = -2
Query: 695 LSSAPLQPPLVDLPAEMLPPPAPSLSNVLSELKSGTVRLKPAQKRPQSEIIPKNSTTKNL 516
L PL P P + PP + S+ L + ++PA K+ +K+
Sbjct: 63 LGPQPLVPSAFGKPYAAIYPPGGAFSHPFMPLMVSPLSMEPA----------KSVNSKDS 112
Query: 515 IADVLVDTINRRRVAMAKSSSEATSND---EGWDDGGNNRPNAPDVK 384
++ + I+ V+ +SE TS D EG DG N + + K
Sbjct: 113 CSNKKMKEIDGAAVSTGSGNSEKTSGDCSLEGSSDGNNQKASGTPKK 159
>12_02_0133 - 14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 28.3 bits (60), Expect = 8.1
Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 4/151 (2%)
Frame = -2
Query: 584 RLKPAQKRPQSEIIPKNSTTKNLIADVLVDTINRRRVAMAKSSSEATSNDEGWDDGGNNR 405
+L + +P SE K+S+ K + I + A S A ++ G ++
Sbjct: 611 KLSLSAVKPMSERNMKDSSAKRNKTFEATNVIAAEKAA----SRPADQSEHIVKCGPSHN 666
Query: 404 PNAPDVKYVQALF-NVFTSSQLY--TNDSDEKNTKAHNILNDVESLLQNKTQT-NIDKAR 237
P + F +V SQLY TN+ D +NT ++ D L N+ QT ++ R
Sbjct: 667 PMCRPKDLLSTSFGHVKKPSQLYGQTNEQDMRNTSSNKASTDGSKLKPNECQTVSVKTGR 726
Query: 236 LLLQDLASRVVLSENPLDSPAIGLQKQPLFE 144
L+ L L + P + Q FE
Sbjct: 727 LVDGSLTMPDALMDKSSTVPELDFIWQGGFE 757
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 674 PPLVDLPAEMLPPPAPSLSNVLS 606
P + PA+M PPPAP++ V S
Sbjct: 481 PSSPESPAKMAPPPAPAIKGVTS 503
>09_02_0224 - 5984128-5984923,5985667-5986718,5986800-5987776,
5988427-5989228,5990966-5991016,5992391-5993464,
5994458-5994706
Length = 1666
Score = 28.3 bits (60), Expect = 8.1
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 3/179 (1%)
Frame = -2
Query: 683 PLQPPLVDLPAEMLPPPAPSLSNVLSEL---KSGTVRLKPAQKRPQSEIIPKNSTTKNLI 513
P+Q + LP +LP +PS S+V+ E+ + G + + P PQ+ + ST+
Sbjct: 572 PIQSGIEPLP--LLPACSPSFSSVVDEVFEYEHGALAV-PNHSLPQTTL---QSTSHPGS 625
Query: 512 ADVLVDTINRRRVAMAKSSSEATSNDEGWDDGGNNRPNAPDVKYVQALFNVFTSSQLYTN 333
V + R A + +S A S + G N ++++VQ+ N F+SS + T
Sbjct: 626 LSVGFQGVGTRANASIEGASSAYSGSKFSPGVGLNSYLPSNLRHVQST-NAFSSSTV-TK 683
Query: 332 DSDEKNTKAHNILNDVESLLQNKTQTNIDKARLLLQDLASRVVLSENPLDSPAIGLQKQ 156
S K + N +++ SL D ++ L AS++ S N + + G ++
Sbjct: 684 SSSIK-LPSSNSNHELSSLSSPTEHVIADGSKSLQLVPASKINGSINLITMGSDGASRK 741
>07_03_1567 -
27772815-27773302,27773471-27773561,27773641-27773988,
27774929-27775110,27775191-27775368,27775453-27775605,
27775993-27776232,27776369-27776449,27776485-27776730,
27777151-27777240,27777536-27777778,27778365-27778529,
27779017-27779080,27779162-27779286,27779383-27779476,
27779647-27779714,27779798-27779989,27780618-27780752,
27780847-27780934,27781014-27781107,27781484-27781547,
27781657-27781708,27781911-27782014,27782099-27782158,
27782687-27782770,27782892-27783125,27783442-27783864,
27784675-27784736,27784867-27785521
Length = 1700
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -2
Query: 515 IADVLVDTINRRRVAMAKSSSEATSNDEGWDDGGNNRPNAPDVKYVQ 375
+ D VD +N R+ + + + +A +DE DGG + PN+ + K VQ
Sbjct: 31 VGDRDVD-LNSRQWNLNEKAEDAYHSDEEQYDGGRSGPNSSENKSVQ 76
>05_05_0173 + 22956927-22958615
Length = 562
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 695 LSSAPLQPPLVDLPAEMLPPPAP 627
L + PL PP PAE++ PP P
Sbjct: 59 LETEPLHPPYSPPPAELVRPPTP 81
>02_05_0492 -
29476883-29476949,29477030-29477166,29477292-29477383,
29477490-29477587,29477677-29477804,29477883-29478026,
29478108-29478397,29478553-29478739,29479085-29479210,
29480488-29480538,29480952-29481002,29482639-29484054
Length = 928
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 382 MSKLYLTCLRRVNCTPTTVMKKIQKRIIF*TTSNLYYKTKHKRISTK 242
MSKL CL +V P ++ K +++I+ N YY KH + T+
Sbjct: 463 MSKLK-QCLMKVAKYPGVIVPKKKEKIVCWLERNCYYGRKHLKEKTR 508
>02_05_0276 +
27378994-27380094,27380185-27380250,27380586-27380660,
27381927-27382025,27382353-27382436,27382519-27382868,
27383190-27383406,27383579-27383658,27383760-27383850,
27386544-27386672,27388771-27388858,27389967-27390097
Length = 836
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 674 PPLVDLPAEMLPPPAPSLSNVLSELKSGTVRLKPAQKRPQSEIIP 540
P LP + PPPAP + ++ S + P Q++PQ ++ P
Sbjct: 219 PESATLPL-LQPPPAPQMPPSETDAGSAMIPRTPQQQQPQPDMWP 262
>01_01_1182 +
9423610-9424041,9424654-9424721,9424979-9425177,
9425349-9425446,9425539-9425608,9425948-9426061,
9427686-9427751
Length = 348
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 476 VAMAKSSSEATSNDEGWDDG 417
V + K +EAT+N GWDDG
Sbjct: 328 VTLVKMVNEATANLPGWDDG 347
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,318,047
Number of Sequences: 37544
Number of extensions: 390576
Number of successful extensions: 2021
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2016
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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