Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10o24
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA...    30   2.9  
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    29   5.1  
AE013599-3447|AAF46888.2|  464|Drosophila melanogaster CG30259-P...    29   5.1  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   6.8  

>AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA
           protein.
          Length = 2346

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -2

Query: 311 REVRELRKSNCTLVYTKNEAAQQV-LLENNFTAINADQTAYLKNYKSYRE 165
           +EVREL  SNC L+ T     +Q+ LL  N        T   +  K+Y +
Sbjct: 700 KEVRELTSSNCKLMNTTEFQKEQIELLHKNIGTYKQQVTTLEERTKNYEK 749


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
            protein.
          Length = 1489

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -2

Query: 749  PSLGQSSESVESDENKR-LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGS 573
            P + ++    ESD+ +R L+ ++ + R    R  H  +K +   + E   S  D  +EG 
Sbjct: 1290 PQIAETQVDCESDDYERILDTQMPDPRKTPTRPRHKRSKFNSFILDEAEKSGSDHEEEGE 1349

Query: 572  NKVGT 558
              +GT
Sbjct: 1350 TTIGT 1354


>AE013599-3447|AAF46888.2|  464|Drosophila melanogaster CG30259-PA
           protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = -2

Query: 743 LGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSI 597
           L Q    +E+ EN +L  +L +  V NL IA+G N     Y+A +P S+
Sbjct: 349 LKQQKRRLEA-ENSQLKTQLQDYLV-NLNIANGSNSHVHSYLARRPKSM 395


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
 Frame = +2

Query: 263   SCTPECSWICAIRAPLV----RTAAPCWGRSSTQSCCRLR--IATCHCPLQF 400
             +C PEC+      + L     R A PC G  +  + C +R  + +C CP+ +
Sbjct: 16294 NCRPECTQSSECLSSLACINQRCADPCPGSCAYNAICHVRNHVPSCQCPVGY 16345


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,884,889
Number of Sequences: 53049
Number of extensions: 712638
Number of successful extensions: 1711
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1711
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)