Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10o23
(429 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071570-1|AAL49192.1| 77|Drosophila melanogaster RE63284p pro... 116 1e-26
AE014296-2583|AAF49576.1| 77|Drosophila melanogaster CG18081-P... 116 1e-26
AE014296-2584|AAF49575.1| 77|Drosophila melanogaster CG15715-P... 115 3e-26
AY071229-1|AAL48851.1| 77|Drosophila melanogaster RE26825p pro... 113 7e-26
BT028799-1|ABI34180.1| 634|Drosophila melanogaster LD13728p pro... 38 0.008
BT011357-1|AAR96149.1| 634|Drosophila melanogaster RE70312p pro... 38 0.008
AY122196-1|AAM52708.1| 352|Drosophila melanogaster LD45766p pro... 38 0.008
AE014297-1108|AAF54502.3| 634|Drosophila melanogaster CG6254-PA... 38 0.008
U73125-1|AAB40721.1| 558|Drosophila melanogaster zinc-finger pr... 34 0.093
AY058357-1|AAL13586.1| 635|Drosophila melanogaster GH12756p pro... 34 0.093
AE014296-2637|AAF49537.2| 635|Drosophila melanogaster CG5215-PA... 34 0.093
AE014296-2636|AAO41247.1| 884|Drosophila melanogaster CG5215-PB... 34 0.093
AE014298-2406|AAF48611.3| 1901|Drosophila melanogaster CG32575-P... 29 2.6
AE014298-2405|AAF48612.3| 1913|Drosophila melanogaster CG32575-P... 29 2.6
AY113416-1|AAM29421.1| 583|Drosophila melanogaster RE16761p pro... 28 4.6
AE014298-588|AAF45912.2| 583|Drosophila melanogaster CG6414-PA ... 28 4.6
U23948-1|AAA82593.1| 486|Drosophila melanogaster malvolio protein. 28 6.1
AY058543-1|AAL13772.1| 596|Drosophila melanogaster LD24465p pro... 28 6.1
AE014297-2916|AAS65187.1| 486|Drosophila melanogaster CG3671-PC... 28 6.1
AE014297-2915|AAN13847.1| 596|Drosophila melanogaster CG3671-PB... 28 6.1
AE014297-2914|AAF55839.2| 596|Drosophila melanogaster CG3671-PA... 28 6.1
BT015996-1|AAV36881.2| 596|Drosophila melanogaster RE49741p pro... 27 8.1
>AY071570-1|AAL49192.1| 77|Drosophila melanogaster RE63284p
protein.
Length = 77
Score = 116 bits (280), Expect = 1e-26
Identities = 53/77 (68%), Positives = 58/77 (75%)
Frame = -3
Query: 250 MARGHQKIXXXXXXXXXXXXXXXXQGHSATDQKKAAQKALVHVCVVCKAQMPDPKTYKQH 71
MARGHQKI QGHSA DQKKAAQKALV+VC VCK+QMPDPKTYKQH
Sbjct: 1 MARGHQKIQSQAKASEKQAKLKKQQGHSANDQKKAAQKALVYVCAVCKSQMPDPKTYKQH 60
Query: 70 FENKHPKNDLPDDLKNI 20
FENKHPKND+PD+LK +
Sbjct: 61 FENKHPKNDMPDELKEV 77
>AE014296-2583|AAF49576.1| 77|Drosophila melanogaster CG18081-PA
protein.
Length = 77
Score = 116 bits (280), Expect = 1e-26
Identities = 53/77 (68%), Positives = 58/77 (75%)
Frame = -3
Query: 250 MARGHQKIXXXXXXXXXXXXXXXXQGHSATDQKKAAQKALVHVCVVCKAQMPDPKTYKQH 71
MARGHQKI QGHSA DQKKAAQKALV+VC VCK+QMPDPKTYKQH
Sbjct: 1 MARGHQKIQSQAKASEKQAKLKKQQGHSANDQKKAAQKALVYVCAVCKSQMPDPKTYKQH 60
Query: 70 FENKHPKNDLPDDLKNI 20
FENKHPKND+PD+LK +
Sbjct: 61 FENKHPKNDMPDELKEV 77
>AE014296-2584|AAF49575.1| 77|Drosophila melanogaster CG15715-PA
protein.
Length = 77
Score = 115 bits (276), Expect = 3e-26
Identities = 52/77 (67%), Positives = 58/77 (75%)
Frame = -3
Query: 250 MARGHQKIXXXXXXXXXXXXXXXXQGHSATDQKKAAQKALVHVCVVCKAQMPDPKTYKQH 71
MARGHQKI QGHSA DQKKAAQKALV+VC VCK+QMPDPKTYKQH
Sbjct: 1 MARGHQKIQSQAKASEKQAKLKKQQGHSANDQKKAAQKALVYVCAVCKSQMPDPKTYKQH 60
Query: 70 FENKHPKNDLPDDLKNI 20
FENKHPKND+P++LK +
Sbjct: 61 FENKHPKNDIPEELKEV 77
>AY071229-1|AAL48851.1| 77|Drosophila melanogaster RE26825p
protein.
Length = 77
Score = 113 bits (273), Expect = 7e-26
Identities = 51/77 (66%), Positives = 58/77 (75%)
Frame = -3
Query: 250 MARGHQKIXXXXXXXXXXXXXXXXQGHSATDQKKAAQKALVHVCVVCKAQMPDPKTYKQH 71
MARGHQKI QGHSA DQKKAAQKALV+VC VCK+QMPDP+TYKQH
Sbjct: 1 MARGHQKIRSQAKASEKQAKLKKQQGHSANDQKKAAQKALVYVCAVCKSQMPDPRTYKQH 60
Query: 70 FENKHPKNDLPDDLKNI 20
FENKHPKND+P++LK +
Sbjct: 61 FENKHPKNDIPEELKEV 77
>BT028799-1|ABI34180.1| 634|Drosophila melanogaster LD13728p
protein.
Length = 634
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 172 HSATDQKKAAQKALVHVCVVCKAQMPDPKTYKQHFENKHPKNDLPDDLKNI*HNQ 8
H ++ + ++ ++ C +CK PK YK+H E H N + DDL + NQ
Sbjct: 314 HVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRHMEEVH--NTVADDLPQLECNQ 366
>BT011357-1|AAR96149.1| 634|Drosophila melanogaster RE70312p
protein.
Length = 634
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 172 HSATDQKKAAQKALVHVCVVCKAQMPDPKTYKQHFENKHPKNDLPDDLKNI*HNQ 8
H ++ + ++ ++ C +CK PK YK+H E H N + DDL + NQ
Sbjct: 314 HVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRHMEEVH--NTVADDLPQLECNQ 366
>AY122196-1|AAM52708.1| 352|Drosophila melanogaster LD45766p
protein.
Length = 352
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 172 HSATDQKKAAQKALVHVCVVCKAQMPDPKTYKQHFENKHPKNDLPDDLKNI*HNQ 8
H ++ + ++ ++ C +CK PK YK+H E H N + DDL + NQ
Sbjct: 32 HVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRHMEEVH--NTVADDLPQLECNQ 84
>AE014297-1108|AAF54502.3| 634|Drosophila melanogaster CG6254-PA
protein.
Length = 634
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 172 HSATDQKKAAQKALVHVCVVCKAQMPDPKTYKQHFENKHPKNDLPDDLKNI*HNQ 8
H ++ + ++ ++ C +CK PK YK+H E H N + DDL + NQ
Sbjct: 314 HVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRHMEEVH--NTVADDLPQLECNQ 366
>U73125-1|AAB40721.1| 558|Drosophila melanogaster zinc-finger
protein Zn72D protein.
Length = 558
Score = 33.9 bits (74), Expect = 0.093
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 130 VHVCVVCKAQMPDPKTYKQHFE-NKHPKND 44
+H C VCK P+TY++H E KH K +
Sbjct: 127 LHYCEVCKISCAGPQTYREHLEGQKHKKRE 156
>AY058357-1|AAL13586.1| 635|Drosophila melanogaster GH12756p
protein.
Length = 635
Score = 33.9 bits (74), Expect = 0.093
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 130 VHVCVVCKAQMPDPKTYKQHFE-NKHPKND 44
+H C VCK P+TY++H E KH K +
Sbjct: 204 LHYCEVCKISCAGPQTYREHLEGQKHKKRE 233
>AE014296-2637|AAF49537.2| 635|Drosophila melanogaster CG5215-PA,
isoform A protein.
Length = 635
Score = 33.9 bits (74), Expect = 0.093
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 130 VHVCVVCKAQMPDPKTYKQHFE-NKHPKND 44
+H C VCK P+TY++H E KH K +
Sbjct: 204 LHYCEVCKISCAGPQTYREHLEGQKHKKRE 233
>AE014296-2636|AAO41247.1| 884|Drosophila melanogaster CG5215-PB,
isoform B protein.
Length = 884
Score = 33.9 bits (74), Expect = 0.093
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 130 VHVCVVCKAQMPDPKTYKQHFE-NKHPKND 44
+H C VCK P+TY++H E KH K +
Sbjct: 204 LHYCEVCKISCAGPQTYREHLEGQKHKKRE 233
>AE014298-2406|AAF48611.3| 1901|Drosophila melanogaster CG32575-PA,
isoform A protein.
Length = 1901
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 124 VCVVCKAQMPDPKTYKQHFENKHPKNDLPDDLK 26
VC +C Q + +H E+KHP N LP+ K
Sbjct: 771 VCPICGQQYNNYNNVLRHMESKHP-NKLPETYK 802
>AE014298-2405|AAF48612.3| 1913|Drosophila melanogaster CG32575-PB,
isoform B protein.
Length = 1913
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 124 VCVVCKAQMPDPKTYKQHFENKHPKNDLPDDLK 26
VC +C Q + +H E+KHP N LP+ K
Sbjct: 771 VCPICGQQYNNYNNVLRHMESKHP-NKLPETYK 802
>AY113416-1|AAM29421.1| 583|Drosophila melanogaster RE16761p
protein.
Length = 583
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 106 PYKPHKHGQVP-FVQLSSGRWHCAPAVSSFW 195
P +P +G +P V G W C +SSF+
Sbjct: 119 PERPRTNGSLPVMVWFHGGGWQCGSGISSFY 149
>AE014298-588|AAF45912.2| 583|Drosophila melanogaster CG6414-PA
protein.
Length = 583
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 106 PYKPHKHGQVP-FVQLSSGRWHCAPAVSSFW 195
P +P +G +P V G W C +SSF+
Sbjct: 119 PERPRTNGSLPVMVWFHGGGWQCGSGISSFY 149
>U23948-1|AAA82593.1| 486|Drosophila melanogaster malvolio protein.
Length = 486
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 39 GRSFLGCLFSKCCL*VLGSGIWALQTTQTWTSAFCAAF 152
G FLGC F + + G GI A + T T + F
Sbjct: 371 GGLFLGCTFGAVAMYIWGVGILAAGQSSTMTGTYAGQF 408
>AY058543-1|AAL13772.1| 596|Drosophila melanogaster LD24465p
protein.
Length = 596
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 39 GRSFLGCLFSKCCL*VLGSGIWALQTTQTWTSAFCAAF 152
G FLGC F + + G GI A + T T + F
Sbjct: 371 GGLFLGCTFGAVAMYIWGVGILAAGQSSTMTGTYAGQF 408
>AE014297-2916|AAS65187.1| 486|Drosophila melanogaster CG3671-PC,
isoform C protein.
Length = 486
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 39 GRSFLGCLFSKCCL*VLGSGIWALQTTQTWTSAFCAAF 152
G FLGC F + + G GI A + T T + F
Sbjct: 371 GGLFLGCTFGAVAMYIWGVGILAAGQSSTMTGTYAGQF 408
>AE014297-2915|AAN13847.1| 596|Drosophila melanogaster CG3671-PB,
isoform B protein.
Length = 596
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 39 GRSFLGCLFSKCCL*VLGSGIWALQTTQTWTSAFCAAF 152
G FLGC F + + G GI A + T T + F
Sbjct: 371 GGLFLGCTFGAVAMYIWGVGILAAGQSSTMTGTYAGQF 408
>AE014297-2914|AAF55839.2| 596|Drosophila melanogaster CG3671-PA,
isoform A protein.
Length = 596
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 39 GRSFLGCLFSKCCL*VLGSGIWALQTTQTWTSAFCAAF 152
G FLGC F + + G GI A + T T + F
Sbjct: 371 GGLFLGCTFGAVAMYIWGVGILAAGQSSTMTGTYAGQF 408
>BT015996-1|AAV36881.2| 596|Drosophila melanogaster RE49741p
protein.
Length = 596
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 39 GRSFLGCLFSKCCL*VLGSGIWALQTTQTWTSAFCAAF 152
G FLGC F + + G GI A + T T + F
Sbjct: 371 GGLFLGCTFGAVAMYIWGVGILAAGQSSTLTGTYAGQF 408
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,731,073
Number of Sequences: 53049
Number of extensions: 334362
Number of successful extensions: 1304
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -