Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10o09
(854 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0285 - 27498946-27499122,27499944-27500108,27500828-275009... 38 0.013
02_01_0238 - 1576211-1576759,1577315-1577664,1578684-1578816 38 0.013
04_04_0839 - 28565732-28565908,28566380-28566544,28566656-285667... 37 0.018
07_03_0284 + 16249497-16249993,16250950-16251069,16251166-162512... 35 0.095
10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081,704... 34 0.13
05_01_0462 - 3658153-3658290,3658394-3658540,3658622-3658720,365... 34 0.13
03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105 34 0.13
03_01_0542 + 4071906-4072241,4073093-4073184,4073275-4073317,407... 34 0.13
02_05_1010 + 33477878-33478446,33478709-33478834,33478905-334791... 34 0.17
07_03_0493 + 18747427-18748356,18748594-18748697,18749586-187497... 33 0.38
03_02_0458 + 8643804-8643904,8643994-8644091,8644206-8644504,864... 33 0.38
01_06_0359 + 28722524-28722613,28722794-28722863,28723062-287231... 33 0.38
01_06_0187 - 27296834-27296980,27297567-27297731,27297820-272979... 33 0.38
05_04_0224 - 19198722-19198835,19198947-19199436,19200478-192006... 32 0.51
02_05_0350 - 28179063-28179584,28179674-28180041,28180179-281802... 32 0.51
05_07_0020 + 27097140-27097676,27097857-27098036,27099361-270994... 32 0.67
03_05_1059 - 30020877-30021539,30022367-30022375 31 1.2
01_04_0052 + 15435709-15436004,15437760-15438255,15439171-15439320 31 1.2
04_04_1553 - 34363848-34366058,34369087-34370451 31 1.5
04_03_0612 + 18023354-18023916,18024046-18024805 30 2.0
01_01_0556 + 4090432-4090500,4091414-4092030,4092408-4092533,409... 30 2.0
05_07_0126 + 27869058-27869805,27869988-27870328,27870430-278705... 30 2.7
09_06_0013 - 20227302-20227325,20227811-20227834,20228111-202282... 29 3.6
05_01_0539 + 4653028-4653158,4654329-4654973,4655323-4655448,465... 29 3.6
04_03_0817 + 20003128-20003189,20003270-20003693,20003788-20004345 29 3.6
03_05_0500 + 24942047-24942541 29 3.6
02_05_1341 - 35801987-35802472 29 3.6
09_03_0096 + 12328116-12329561,12329810-12329852,12332119-123322... 29 4.7
09_02_0342 + 7464679-7464691,7466689-7468136 29 4.7
05_01_0299 - 2322204-2322734,2324089-2326164 29 4.7
04_03_0815 - 19949584-19950111,19950210-19950632 29 4.7
04_03_0614 + 18038848-18040287 29 4.7
05_01_0322 - 2538320-2538742,2539349-2539521,2539764-2539854,254... 29 6.2
02_04_0043 + 19185969-19186036,19186205-19187342 29 6.2
09_04_0088 + 14494711-14494931,14496309-14496399,14496496-144965... 28 8.3
09_02_0436 - 9391496-9391596,9391671-9391742,9392535-9392742,939... 28 8.3
07_03_1610 - 28131623-28131710,28132017-28132321,28132921-281331... 28 8.3
07_03_0872 - 22190468-22190575,22190652-22190910,22191005-221911... 28 8.3
06_01_1147 + 9606860-9606989,9607078-9607811,9607890-9608126,960... 28 8.3
>02_05_0285 -
27498946-27499122,27499944-27500108,27500828-27500960,
27501052-27501171,27502436-27502980
Length = 379
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -3
Query: 807 AVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIR 655
A D+ C C ++ + L CGH C D+ ++++ TCP CK +R
Sbjct: 318 AEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCKFNVR 368
>02_01_0238 - 1576211-1576759,1577315-1577664,1578684-1578816
Length = 343
Score = 37.5 bits (83), Expect = 0.013
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -3
Query: 795 ACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCK 667
AC CR A AV + C H CLC DC++ +V CP C+
Sbjct: 295 ACRLCRMKEA---AVLVMPCRHLCLCADCEKNADV---CPVCR 331
>04_04_0839 -
28565732-28565908,28566380-28566544,28566656-28566788,
28566888-28567007,28568361-28568740
Length = 324
Score = 37.1 bits (82), Expect = 0.018
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 801 DSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIR 655
D+ C C ++ + L CGH C D+ ++++ TCP CK IR
Sbjct: 265 DAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCKFNIR 313
>07_03_0284 +
16249497-16249993,16250950-16251069,16251166-16251298,
16251867-16252031,16253289-16253459
Length = 361
Score = 34.7 bits (76), Expect = 0.095
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 813 VKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 658
+ A D+ C C + + L C H CT D+ ++++ TCP CK I
Sbjct: 300 LSAEDAECCICLCPYEDGAELRELPCNHHFHCTCIDKWLHINATCPLCKFNI 351
>10_03_0012 -
7037088-7037282,7037453-7037954,7038079-7038081,
7040633-7041213
Length = 426
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 750 TYLHCGHSCLCTDCDETVNVD-NTCPKCKSGIRYKLKYK 637
T L C H C+C++C + + N CP C+ + L+ K
Sbjct: 355 TVLPCRHMCMCSECAKVLRYQTNRCPICRQPVERLLEIK 393
>05_01_0462 -
3658153-3658290,3658394-3658540,3658622-3658720,
3658802-3659253,3659597-3660280,3662072-3662180
Length = 542
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 792 CMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 664
C+ C + + L CGH C + + V NTCP CK+
Sbjct: 493 CVICLEEYKHEDTLGRLKCGHGFHCNCIKKWLQVKNTCPVCKA 535
>03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105
Length = 430
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 750 TYLHCGHSCLCTDCDETVNVDNT-CPKCKSGIRYKLKYK 637
T L C H C+C++C + + T CP C+ + L+ K
Sbjct: 350 TVLPCRHMCMCSECAKVLRYQTTRCPICRQPVERLLEIK 388
>03_01_0542 +
4071906-4072241,4073093-4073184,4073275-4073317,
4073601-4073720,4073785-4073949,4074042-4074163,
4074357-4074476,4074645-4074936
Length = 429
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 792 CMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVN--VDNTCPKCKSGIRYKLK 643
C+R RR A P CGH C C V D CP C+ IRY ++
Sbjct: 380 CLRKRRKAAFIP------CGHLVCCCKCALIVERQFDPLCPMCRQDIRYMIR 425
>02_05_1010 +
33477878-33478446,33478709-33478834,33478905-33479190,
33479293-33479484,33479641-33479870,33480379-33480718,
33481673-33481789,33481940-33482014
Length = 644
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 822 ECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDC-DETVNVDNTCPKCKSGI 658
E ++ A D+ C C +A + L C H C +C D+ + ++ CP CKS I
Sbjct: 319 ERSLSAEDAVCCICLAKYAHNDELRELPCTH-CFHKECVDKWLKINALCPLCKSEI 373
>07_03_0493 +
18747427-18748356,18748594-18748697,18749586-18749795,
18749992-18750597,18750819-18751095,18751163-18751310,
18751957-18752044,18752167-18752284
Length = 826
Score = 32.7 bits (71), Expect = 0.38
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 738 CGHSCLCTDC-DETVNVDNTCPKCKSGI 658
CGH C C +C D+ + + +CP C+S I
Sbjct: 789 CGHMCTCFNCADQLKSSNRSCPICQSPI 816
>03_02_0458 +
8643804-8643904,8643994-8644091,8644206-8644504,
8645930-8646460
Length = 342
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 798 SACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 664
+AC C+ S A + L C H CLC +C+ ++ CP C+S
Sbjct: 294 TACRVCKSSEA---CMLLLPCRHLCLCKECESKLSF---CPLCQS 332
>01_06_0359 +
28722524-28722613,28722794-28722863,28723062-28723159,
28724029-28724167,28724243-28724370,28724500-28724592,
28724707-28724757,28725405-28725470,28725568-28725633,
28725900-28725977,28726248-28726427,28726502-28726577,
28726660-28726823,28727569-28727931
Length = 553
Score = 32.7 bits (71), Expect = 0.38
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -2
Query: 796 CMHALQKKFRSLPRRYLSALRTFVFVHRLRRNG 698
C+HAL ++ R ++ AL+T V +HRL R+G
Sbjct: 71 CIHALARRLAKT-RNWIVALKTLVVIHRLLRDG 102
>01_06_0187 -
27296834-27296980,27297567-27297731,27297820-27297918,
27299276-27299616,27299824-27300643
Length = 523
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 801 DSACMRCRRSFAVYPAVTYLHCGHSCLCTDC-DETVNVDNTCPKCKS 664
+ AC+ C+ + V + L CGH DC + + V N CP CK+
Sbjct: 468 NDACIICQEEYQVKECIGTLDCGHR-YHEDCIKQWLMVKNLCPICKT 513
>05_04_0224 -
19198722-19198835,19198947-19199436,19200478-19200641,
19202534-19202632,19204069-19204175,19204278-19204401,
19205113-19205242,19205314-19205433,19205861-19206002,
19207243-19207326,19207651-19207742,19207855-19207944,
19208057-19208136,19208312-19208451,19208587-19209067
Length = 818
Score = 32.3 bits (70), Expect = 0.51
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 792 CMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVD-NTCPKCKSGIRYKLKYK 637
C+ R AV+P C H C+C++C +T+ + CP C+ + ++ K
Sbjct: 766 CLTEPRDTAVFP------CRHLCMCSECAKTLRFQTDKCPICRQPVEKLMEIK 812
>02_05_0350 -
28179063-28179584,28179674-28180041,28180179-28180270,
28180366-28180412
Length = 342
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -3
Query: 801 DSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVD--NTCPKC 670
D AC+ CR A V L C H LC DC +VD CP C
Sbjct: 287 DRACLTCRLRPAT---VVLLPCRHLSLCGDCFAAGDVDVAMACPVC 329
>05_07_0020 +
27097140-27097676,27097857-27098036,27099361-27099456,
27099557-27099706,27099794-27099925
Length = 364
Score = 31.9 bits (69), Expect = 0.67
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -3
Query: 804 VDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 664
V+ C C+ F L CGHS + ++ NTCP CK+
Sbjct: 313 VERNCSICQEEFEANEETGRLICGHSYHVQCIKQWLSRKNTCPVCKT 359
>03_05_1059 - 30020877-30021539,30022367-30022375
Length = 223
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 738 CGHSCLCTDCDETVNVDNTCPKCKSGI 658
CGH+ LC +C + +V CP C+S I
Sbjct: 46 CGHASLCAECSQRCDV---CPICRSPI 69
>01_04_0052 + 15435709-15436004,15437760-15438255,15439171-15439320
Length = 313
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -3
Query: 744 LHCGHSCLCTDCDETVNVD-NTCPKCKSGI 658
L C H CLC +C + + N CP C+ +
Sbjct: 259 LPCRHMCLCRECAQVLKYQTNKCPICRQPV 288
>04_04_1553 - 34363848-34366058,34369087-34370451
Length = 1191
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 795 ACMRCRRSFAVYPAVTYLHCGHSCLCTDCD 706
+C RC R V+ V ++H GHS +C D
Sbjct: 473 SCCRCIRFLHVFVFVLHIHGGHSQMCDPAD 502
>04_03_0612 + 18023354-18023916,18024046-18024805
Length = 440
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 94 LNCKHTVFIFLSNHSHLPNECFKEIDVNTDSVNTNIFLLFTHKPNSGLYILTSCCSVM 267
L C FL+ S PN EID + + H N GL++L+SCC+++
Sbjct: 45 LGCGLATEDFLALCSRFPNLLKVEIDYSGSTPGNG-----NHIDNQGLFVLSSCCTLL 97
>01_01_0556 +
4090432-4090500,4091414-4092030,4092408-4092533,
4092619-4092895,4093021-4093251
Length = 439
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -3
Query: 822 ECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 658
E + A D+ C C F+ + L C H D+ + ++ CP CK+ +
Sbjct: 355 ERTISAEDAVCCICLSKFSNNEDLRELPCNHVFHLECVDKWLKINALCPLCKADL 409
>05_07_0126 +
27869058-27869805,27869988-27870328,27870430-27870510,
27870978-27871073,27871152-27871307,27871575-27871721
Length = 522
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 795 ACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 664
AC+ C+ + V L CGH + V N CP CK+
Sbjct: 469 ACIICQEEYEAKELVGTLGCGHKYHAMCIKGWLMVKNLCPICKT 512
>09_06_0013 -
20227302-20227325,20227811-20227834,20228111-20228219,
20228346-20228470,20229427-20229576,20229621-20229685,
20229808-20229952
Length = 213
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Frame = -3
Query: 834 PLNTECNV---KAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDC-DETVNVDNTCPKCK 667
P +C+ K D C+ C+ ++ + L C H C DC + ++ CP C
Sbjct: 146 PFKNKCSFFSRKKNDEECVICKSTYKSRQKLIRLPCSH-CYHADCITRWLKINKACPVCN 204
Query: 666 SGI 658
+
Sbjct: 205 EEV 207
>05_01_0539 +
4653028-4653158,4654329-4654973,4655323-4655448,
4655537-4655813,4655916-4656143
Length = 468
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -3
Query: 828 NTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDC-DETVNVDNTCPKCKSGI 658
N E + A D+ C C + + L C H DC D+ + ++ CP CK+ I
Sbjct: 383 NKERVISAEDAVCCICLARYVDNDDLRELPCAHF-FHKDCVDKWLKINALCPLCKAEI 439
>04_03_0817 + 20003128-20003189,20003270-20003693,20003788-20004345
Length = 347
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3
Query: 795 ACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKC 670
A C+ A ++ L C H CLC C+ V + CP C
Sbjct: 296 AAALCKACGAGEASMLLLPCRHLCLCRGCEAAV---DACPVC 334
>03_05_0500 + 24942047-24942541
Length = 164
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/48 (25%), Positives = 19/48 (39%)
Frame = -3
Query: 801 DSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 658
+ C C+ +A V + CGH D + CP C+ G+
Sbjct: 83 EDRCAYCQSEYAGADEVRVVQCGHFFHAGCIDRWLRKHRRCPLCRGGL 130
>02_05_1341 - 35801987-35802472
Length = 161
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3
Query: 792 CMRCRRSFAVYPAVTYL-HCGHSCLCTDCDETVNVDNTCPKCKSGI 658
C C FA + L HCGH+ + D + TCP C++ +
Sbjct: 76 CAICLAEFAGGEELRLLPHCGHAFHVSCIDTWLGTHATCPSCRATV 121
>09_03_0096 +
12328116-12329561,12329810-12329852,12332119-12332237,
12333326-12333853
Length = 711
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 792 CMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNT--CPKCKSGIRYKLK 643
C+ C+R A V L C H LC C++ CP C + + +++
Sbjct: 656 CVICKREEA---CVILLQCAHQVLCVGCNKRHEEKGVARCPCCNAKVEERIR 704
>09_02_0342 + 7464679-7464691,7466689-7468136
Length = 486
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 166 IDVNTDSVNTNIFLLFTHKPNSGLYILTSCCSVMQVSTPRSN 291
+D+NT +V N+ +L H P+ G + C + Q++ S+
Sbjct: 340 VDMNTSTVLRNLMMLEQHNPSLGSQVTAYCYFLSQLAGTASD 381
>05_01_0299 - 2322204-2322734,2324089-2326164
Length = 868
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 801 DSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVD--NTCPKCKSGIRYKL 646
D C+ C + +V +L C H +C C++ + CP C++ I+ ++
Sbjct: 811 DRECVMC---LSEEMSVVFLPCAHQVVCAKCNDLHDKQGMKECPSCRTPIQRRV 861
>04_03_0815 - 19949584-19950111,19950210-19950632
Length = 316
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 798 SACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKC 670
++C CR + A +V L C H CLC C+ + CP C
Sbjct: 267 TSCKACRVAEA---SVLLLPCRHLCLCGACEAAA---DACPVC 303
>04_03_0614 + 18038848-18040287
Length = 479
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 136 SHLPNECFKEIDVNTDSVNTNIFLLFTHKPNSGLYILTSCCSVM 267
S PN EID + + H N GL++LTSCC+++
Sbjct: 59 SRFPNLLKVEIDYSGSTPGNG-----NHIDNQGLFVLTSCCTLL 97
>05_01_0322 -
2538320-2538742,2539349-2539521,2539764-2539854,
2540005-2540121,2540327-2540392,2540933-2541025,
2541661-2541721,2542634-2542707,2542782-2542848,
2543342-2543400
Length = 407
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -3
Query: 798 SACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 658
S C C F V V L C H+ D+ + ++ CP+C+ +
Sbjct: 253 SECPICLEEFHVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSV 299
>02_04_0043 + 19185969-19186036,19186205-19187342
Length = 401
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -3
Query: 795 ACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKC 670
AC C + A V L C H CLC C+ + CP C
Sbjct: 353 ACRACGEADA---CVLLLPCRHLCLCRGCEAAA---DACPVC 388
>09_04_0088 +
14494711-14494931,14496309-14496399,14496496-14496571,
14496671-14496755,14497381-14497450,14499111-14499316,
14499434-14499508,14501043-14501133,14501400-14501441,
14501661-14501741,14502010-14502089,14502254-14502365
Length = 409
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -3
Query: 783 CRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKL 646
CR F + L C H LC C + +CP C+ I KL
Sbjct: 351 CRICFERDICIVLLPCRHYVLCEACSDKC---RSCPICRVSIENKL 393
>09_02_0436 -
9391496-9391596,9391671-9391742,9392535-9392742,
9393413-9393707,9393782-9393916,9394624-9394898,
9394976-9395149
Length = 419
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -3
Query: 813 VKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 658
V A D+ C C + + L C H D+ + ++ CP CK+ I
Sbjct: 288 VSAEDAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 339
>07_03_1610 -
28131623-28131710,28132017-28132321,28132921-28133118,
28134016-28134183
Length = 252
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -3
Query: 798 SACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNT 682
+A RC PAV Y + LC CD V+ NT
Sbjct: 18 AAAARCCDFCGGLPAVVYCRADSARLCLPCDRHVHAANT 56
>07_03_0872 -
22190468-22190575,22190652-22190910,22191005-22191108,
22191245-22191423,22191565-22191670,22191797-22191940,
22192024-22192179,22192274-22192378,22192483-22192545,
22192993-22192995
Length = 408
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Frame = -1
Query: 593 VYLSPAQILNLNLPLAYQKSVL-----FASNSAKVNERIRRLAR 477
VYL P + L YQ VL FA + AK+N R+R LAR
Sbjct: 53 VYLFPNYHPTRMITLVYQPFVLTTTALFAYHEAKINTRMRNLAR 96
>06_01_1147 +
9606860-9606989,9607078-9607811,9607890-9608126,
9608433-9609265,9609598-9609856,9610294-9610377,
9610484-9610498
Length = 763
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 536 FFGMPKEDLNLKSAPATSKPTRKSP 610
F PKED+ +K P S+PT +P
Sbjct: 444 FIQWPKEDIVVKMTPCPSRPTELTP 468
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,236,792
Number of Sequences: 37544
Number of extensions: 387828
Number of successful extensions: 1221
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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